Ggra4308.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4308.t1
Unique NameGgra4308.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000022_piloncontigtig00000022_pilon:476940..477554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4308Ggra4308Gracilaria gracilis GNS1m malegenetig00000022_pilon 476940..477554 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4308.t1.stop1Ggra4308.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000022_pilon 476940..476942 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4308.t1.CDS1Ggra4308.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000022_pilon 476940..477554 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4308.t1.exon1Ggra4308.t1.exon1Gracilaria gracilis GNS1m maleexontig00000022_pilon 476940..477554 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4308.t1.start1Ggra4308.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000022_pilon 477552..477554 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4308.t1Ggra4308.t1Gracilaria gracilis GNS1m malepolypeptidetig00000022_pilon 476940..477554 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4308.t1 ID=Ggra4308.t1|Name=Ggra4308.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=205bp
MHIAHGQYEELTNDYSCAPENQALRKERFPDWNYDIEAADHSRQPFPLTW
EPILESVDGCNRLDDEYYKQFSFTVVLDKSWIDFYNDNKGAFRRQGLRTF
KATPRLLFNRVSYLYERLFEVRIRISQVVPLPNLEMACDNNNGDVDDGTF
ETSTWQQLQDAEVELEPGSAGIIRLGTGDLRDDVYCDSYAPGSAICEQDA
ITVN*
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spliced messenger RNA

>Ggra4308.t1 ID=Ggra4308.t1|Name=Ggra4308.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=615bp|location=Sequence derived from alignment at tig00000022_pilon:476940..477554- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCACATCGCACATGGACAGTACGAAGAGTTGACAAATGACTATAGCTG
CGCGCCGGAAAATCAGGCCTTGCGAAAGGAGCGATTTCCCGACTGGAACT
ACGACATTGAAGCAGCCGACCACTCGAGGCAACCATTCCCGCTCACATGG
GAGCCCATCCTGGAGTCGGTCGACGGCTGCAACAGGCTAGATGATGAGTA
CTACAAGCAATTCTCCTTCACCGTCGTTCTGGACAAGTCGTGGATCGATT
TTTACAACGACAATAAGGGGGCGTTCAGGAGACAAGGGCTCAGAACGTTC
AAGGCAACGCCCAGGCTGCTCTTCAACCGCGTGTCGTACCTGTACGAGAG
GCTGTTCGAAGTGCGTATCCGCATCAGTCAAGTGGTGCCTTTACCAAACT
TGGAAATGGCTTGCGATAATAATAATGGCGATGTGGATGACGGCACCTTT
GAGACCAGCACGTGGCAGCAGCTGCAGGACGCAGAGGTGGAGCTGGAACC
CGGGTCGGCGGGTATCATCCGACTGGGCACTGGTGATCTCCGTGACGATG
TGTACTGCGACTCATATGCCCCAGGTTCCGCAATCTGCGAACAAGACGCC
ATCACGGTGAACTAG
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protein sequence of Ggra4308.t1

>Ggra4308.t1 ID=Ggra4308.t1|Name=Ggra4308.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MHIAHGQYEELTNDYSCAPENQALRKERFPDWNYDIEAADHSRQPFPLTW
EPILESVDGCNRLDDEYYKQFSFTVVLDKSWIDFYNDNKGAFRRQGLRTF
KATPRLLFNRVSYLYERLFEVRIRISQVVPLPNLEMACDNNNGDVDDGTF
ETSTWQQLQDAEVELEPGSAGIIRLGTGDLRDDVYCDSYAPGSAICEQDA
ITVN*
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mRNA from alignment at tig00000022_pilon:476940..477554-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4308.t1 ID=Ggra4308.t1|Name=Ggra4308.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=615bp|location=Sequence derived from alignment at tig00000022_pilon:476940..477554- (Gracilaria gracilis GNS1m male)
ATGCACATCGCACATGGACAGTACGAAGAGTTGACAAATGACTATAGCTG
CGCGCCGGAAAATCAGGCCTTGCGAAAGGAGCGATTTCCCGACTGGAACT
ACGACATTGAAGCAGCCGACCACTCGAGGCAACCATTCCCGCTCACATGG
GAGCCCATCCTGGAGTCGGTCGACGGCTGCAACAGGCTAGATGATGAGTA
CTACAAGCAATTCTCCTTCACCGTCGTTCTGGACAAGTCGTGGATCGATT
TTTACAACGACAATAAGGGGGCGTTCAGGAGACAAGGGCTCAGAACGTTC
AAGGCAACGCCCAGGCTGCTCTTCAACCGCGTGTCGTACCTGTACGAGAG
GCTGTTCGAAGTGCGTATCCGCATCAGTCAAGTGGTGCCTTTACCAAACT
TGGAAATGGCTTGCGATAATAATAATGGCGATGTGGATGACGGCACCTTT
GAGACCAGCACGTGGCAGCAGCTGCAGGACGCAGAGGTGGAGCTGGAACC
CGGGTCGGCGGGTATCATCCGACTGGGCACTGGTGATCTCCGTGACGATG
TGTACTGCGACTCATATGCCCCAGGTTCCGCAATCTGCGAACAAGACGCC
ATCACGGTGAACTAG
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Coding sequence (CDS) from alignment at tig00000022_pilon:476940..477554-

>Ggra4308.t1 ID=Ggra4308.t1|Name=Ggra4308.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=615bp|location=Sequence derived from alignment at tig00000022_pilon:476940..477554- (Gracilaria gracilis GNS1m male)
ATGCACATCGCACATGGACAGTACGAAGAGTTGACAAATGACTATAGCTG
CGCGCCGGAAAATCAGGCCTTGCGAAAGGAGCGATTTCCCGACTGGAACT
ACGACATTGAAGCAGCCGACCACTCGAGGCAACCATTCCCGCTCACATGG
GAGCCCATCCTGGAGTCGGTCGACGGCTGCAACAGGCTAGATGATGAGTA
CTACAAGCAATTCTCCTTCACCGTCGTTCTGGACAAGTCGTGGATCGATT
TTTACAACGACAATAAGGGGGCGTTCAGGAGACAAGGGCTCAGAACGTTC
AAGGCAACGCCCAGGCTGCTCTTCAACCGCGTGTCGTACCTGTACGAGAG
GCTGTTCGAAGTGCGTATCCGCATCAGTCAAGTGGTGCCTTTACCAAACT
TGGAAATGGCTTGCGATAATAATAATGGCGATGTGGATGACGGCACCTTT
GAGACCAGCACGTGGCAGCAGCTGCAGGACGCAGAGGTGGAGCTGGAACC
CGGGTCGGCGGGTATCATCCGACTGGGCACTGGTGATCTCCGTGACGATG
TGTACTGCGACTCATATGCCCCAGGTTCCGCAATCTGCGAACAAGACGCC
ATCACGGTGAACTAG
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