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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4285.t1.start1 | Ggra4285.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000022_pilon 95191..95193 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra4285.t1 ID=Ggra4285.t1|Name=Ggra4285.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=387bp MDMHRQCQRREQFGCLYRKYSAHNFHCALDPETAANYECPDGIVRIRNVT LRPNHPVEFNLAVHLVGRPLTVHLLIDASSSTRPRLAEVKHELIPFVRQL NGTAHVGVRIFGGEQYFNGSGYMVLSSAEDEDVQHALNALENIPSFPDGV PTTAKALGAIRPSDGYLYGYYTRGIVMLIGDTPGRESDCSPYLSKVSERL FDSGISVIPVNLGGAGIDAALSHIPPCSNVNGSIETNVAEGQASNMENKT NGEMVQIVTSENLLQAVDRVRRRPPRPYHPEPGAEISISTEYVEAGFRYY YLPQPGVDGCEERIIANLTGIPSFVSEPADLTGKVKLELPSGICQSGPFS CEFRILDGKGGYEQDAGRWYRPQVNTKVITVHACGS* back to topspliced messenger RNA >Ggra4285.t1 ID=Ggra4285.t1|Name=Ggra4285.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1161bp|location=Sequence derived from alignment at tig00000022_pilon:88635..95193- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACATGCACCGCCAGTGCCAAAGACGAGAACAATTTGGATGCCTGTA CAGAAAGTATTCCGCCCACAACTTTCACTGCGCTCTGGATCCGGAAACTG CCGCCAATTATGAATGTCCAGATGGAATAGTTAGGATTAGAAATGTTACA CTGCGACCTAATCACCCCGTGGAGTTCAATCTCGCCGTGCATCTTGTCGG ACGTCCTCTTACTGTACATCTTCTCATCGATGCTAGTTCGTCGACGAGAC CACGCTTGGCCGAAGTTAAGCATGAGCTGATTCCGTTTGTTAGACAGCTC AACGGAACTGCTCACGTCGGAGTAAGAATCTTTGGAGGTGAACAGTATTT TAACGGAAGCGGATACATGGTGCTTTCTTCTGCTGAAGATGAAGACGTCC AACACGCGCTAAATGCACTTGAGAATATTCCTTCTTTCCCTGATGGAGTG CCTACAACAGCTAAAGCGCTGGGTGCAATAAGGCCTTCCGATGGCTATCT TTATGGGTATTATACTCGTGGAATTGTGATGCTAATTGGAGATACACCGG GGCGCGAATCTGATTGCTCACCATACCTAAGTAAAGTCTCCGAAAGATTG TTCGACTCAGGTATTTCAGTGATACCTGTTAACCTCGGTGGTGCTGGTAT AGATGCGGCTCTATCACATATCCCACCCTGTTCAAATGTAAATGGCAGCA TAGAAACAAACGTGGCAGAAGGACAGGCGAGCAACATGGAAAACAAGACC AACGGTGAAATGGTACAGATAGTCACATCGGAAAATCTCCTTCAAGCTGT TGACCGTGTGCGCAGGAGGCCCCCAAGACCGTATCATCCTGAACCGGGGG CAGAAATCTCTATTTCTACGGAATATGTTGAAGCAGGTTTCCGTTATTAC TATCTTCCGCAGCCGGGTGTGGATGGTTGTGAAGAGCGGATTATTGCAAA TCTAACAGGAATTCCAAGCTTCGTAAGCGAGCCCGCCGATTTGACGGGCA AGGTGAAGCTGGAGCTTCCCAGTGGGATTTGCCAGAGTGGTCCGTTCTCG TGCGAGTTTCGTATCCTGGACGGAAAAGGTGGGTACGAACAGGATGCTGG CCGTTGGTATAGACCGCAAGTGAATACCAAAGTAATCACGGTTCACGCCT GCGGTTCCTGA back to topprotein sequence of Ggra4285.t1 >Ggra4285.t1 ID=Ggra4285.t1|Name=Ggra4285.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=387bp
MDMHRQCQRREQFGCLYRKYSAHNFHCALDPETAANYECPDGIVRIRNVT LRPNHPVEFNLAVHLVGRPLTVHLLIDASSSTRPRLAEVKHELIPFVRQL NGTAHVGVRIFGGEQYFNGSGYMVLSSAEDEDVQHALNALENIPSFPDGV PTTAKALGAIRPSDGYLYGYYTRGIVMLIGDTPGRESDCSPYLSKVSERL FDSGISVIPVNLGGAGIDAALSHIPPCSNVNGSIETNVAEGQASNMENKT NGEMVQIVTSENLLQAVDRVRRRPPRPYHPEPGAEISISTEYVEAGFRYY YLPQPGVDGCEERIIANLTGIPSFVSEPADLTGKVKLELPSGICQSGPFS CEFRILDGKGGYEQDAGRWYRPQVNTKVITVHACGS* back to topmRNA from alignment at tig00000022_pilon:88635..95193- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra4285.t1 ID=Ggra4285.t1|Name=Ggra4285.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=6559bp|location=Sequence derived from alignment at tig00000022_pilon:88635..95193- (Gracilaria gracilis GNS1m male) ATGGACATGCACCGCCAGTGCCAAAGACGAGAACAATTTGGATGCCTGTA
CAGAAAGTATTCCGCCCACAACTTTCACTGCGCTCTGGATCCGGAAACTG
CCGCCAATTATGAATGTCCAGATGGAATAGTTAGGATTAGAAATGTTACA
CTGCGACCTAATCACCCCGTGGAGTTCAATCTCGCCGTGCATCTTGTCGG
ACGTCCTCTTACTGTACATCTTCTCATCGATGCTAGTTCGTCGACGAGAC
CACGCTTGGCCGAAGTTAAGCATGAGCTGATTCCGTTTGTTAGACAGCTC
AACGGAACTGCTCACGTCGGAGTAAGAATCTTTGGAGGTGAACAGTATTT
TAACGGAAGCGGATACATGGTGCTTTCTTCTGCTGAAGATGAAGACGTCC
AACACGCGCTAAATGCACTTGAGAATATTCCTTCTTTCCCTGATGGAGTG
CCTACAACAGCTAAAGCGCTGGGTGCAATAAGGCCTTCCGATGGCTATCT
TTATGGGTATTATACTCGTGGAATTGTGATGCTAATTGGAGATACACCGG
GGCGCGAATCTGATTGCTCACCATACCTAAGTAAAGGTTGGTTGCAAATC
AGTTTGTAGAAGCACTGTTTACTTGTTCTCTAGCGTTGGTCGTTCGTAGC
TTCTGCTTCCTTCTATTCTACGTTGATGGCTGCTTGCTGGGGTTTTTATA
CCCGCGCTGACACACGTCGCATCCTGTAGTTCTTGGCCACGCAATCTCTA
GTGCTCACCATGCGCACGGCCACGCAACACATACTGCTAACACTACGCAA
CGTCACACAATCTCTAATGCACTAGATAATATCTAATGATCAGCAGCTCT
CCCTGTGTCAGTTGCTTGCGTACAGTATTGCCATTTGCATTCTGACATGC
AGTAGTTGCATTTGCGCGTTGCATTTTGCTGACACTGCGATGCGTTAGTC
TTCCAGCAACCAATGCAGCTGACAATTGCATTCATTGCATTCCATACTAT
TCCCTCTTCGAGTTGATCTTATCCAATTGGCTTGTGAGAACTGTTAGAGA
CCGCTTCGTCGAAGTCCATGGAGATGGTTCCGTCGTACAACATCAATTCT
AAACTGTCACACATCGGGCTATCCGTCTTCGTAACGGGATCTGCGTAGTT
CATCTTACCCGGAATCCACACCATTCTATGGATGTTCCGCGTCTCGAACT
CGTACCGAATGACGCTGACGTCTCCGCAAATCGATCAGTCTGCTGCATTG
CGGCAAGTAGAAAGCGTTTGGTACAAATCCTTAGAGTCAACAATAATCCA
GAGTTCAACTTCGATTTCTAGTAATTCGCTAGACGCCTTACAAAGTACCT
TCCCTTCGTCTATTCCTTCTCCAGCAGCCAAAGTCTCCGCTGAACCAATC
GACTTCACCGGCCTTCTTGCCTTATGTGAGCTCCATGATATGACATGGAT
GGCAGCACCTCGCTTCAAGTCGCCAAAGAGCAGTCCCGCAACAAAACCAA
GCTGCGCGTAGTCTTCGCTCCGACTAGCATCACAGAACACAACGACTGAA
ACCTTACACTGCTGCACATGCACGGGTCGGACTAGGTTCACGGTAGTTCC
TTTCTTCTTCAACCACCTCAGCATGTTGATCTGGGCAATAAAGTCCTTGA
CTTTCGGCGTTGGGCCCTTCTGCTGCAAGTAGCTTGCGGCGAACGCCCAA
AACGGTGAAGTAGCAATACCGAGCCATCCGATGCAACTGTTAAGAGACCG
AAAAGTAGCGAGTTCAATGCTGTTGAGTGCGCTTTCCTGCTGCTTTCTAC
GGGACCTGGAGATAGTTCCTGGTTGGTAGCCTTGTAACTTCTCGTCTCCG
TCGATCGAAATGGTCATATCATCGCGCTGCGTAATCAGTAGCCCGTAGAA
CTGAATCTTTCCAGGTCCGTACACGATAGTTCCAAGTTGGTAACGCTTCT
TGATATTCTCAATAACTTCTGTTACCTTACTTCTGCTCCCTCCGAACAAG
ATGTCATCCACCACCTTAACTACCACAACGCTGATCTTTCCATCGTCAGT
TCTGTAGAATAGTTGCGGCACGTACACGAGTTGCGAGAATCCAAATCCTC
GCAATACATCGTCGCTGAGTTGCTGCCACTTTGCTCCGGCGTTGGCTAGT
CCATAGGCGGCTGACAATAGTAACCAGTAGTGCTGACGTCGAGTGTCACA
CTCGCGCGGGGGTAGCACATAAACGTCACGGTGGGCTTCGGTCTGCAGAA
ATGCGCTCTTGAAGTCGATCTTTGCAAGAGTCCAACGGTGGATGGTCGCA
AGCGAAAGTAGTATTCGGATTCCAACAGGCGGACAGGTCGCTGAATCGGT
CTTGAGTGCACCCTTGTCGCGGTCCTTGTTGCCGTGAACGGCAATCCTGG
CCTTCAGCGTCAGTGAGCCATCGTCGCACTTCTTTACCTTATAGAACACG
TGGCTTGTCACGATGTTGGCCTTTTTCGGCACCTGCGAGATGGGAACGAC
TCGGACGATCTTCTTGAACGACCGTTCTTCTCGCTCGTAGGCGTTCTGTG
TTGCGTACGGTGGCATACCCTGCGCTTGATGAAGCATGAATTCTGTTGAT
CCGAACTCGTCGTGGTACGTCTTGACGAGTTCTTGCTCCTTGCTGTGGAG
CTCCTGTCCTGGCGAGAGTTCTACTTCGGCCGCGTTGACTACATCTGGCG
CTCCGTCTGCCTCATGCTGAGAACCCTCCTGTACGTAGTTCCATACTTCG
TTCTGCAAGTCGAGTTCTTCCTTATCGCCGTCCGCGTAGTGAATAGAATG
CATTCCGGATGCTTCACTGTAGCTGTTCACAGTACCTGGGTAAAACTCCT
TGTCGATGGGCCAGTATACTGCAATACTGTCCCCTACGCTAGGCAAATTC
GGTCCGATGGGGTCCGGTTCTTCTTCGTCGGTGTGCGCTCGATGTGTCAG
CATGTCTTCGTCCTCTTCCAACGACCTTCCATAGCTCTGCTCATCCTGCA
ACTGGTCTACAACTTCATCCAGGTTTCTGTCCAGTTAATCGATAGCATCT
TGCACAGCGATAGCTAGCTCCTGATCTTTGATCGCCGGCCTTACATCTTC
GATCGCGGCGCTAATCTGCTTCCCTTTGGATCCGGCTACGGTTACGGTAC
GATTCGCGACATCGTATGCCAGCACTGCTTTGTTGCTCGACCACTTACCA
CGCTTGTCGTACTGATTCTTGACAAAGAGCTGAACGATATCTCCTACTGC
AATCGGGAATTCGTTCACGGTTTTCGAGCGGAGGATAAGCGTAAGTTTGC
GTTTGGCCAATAGCTTTTGGTGGGCGTCGACAATATCCTGAGGTAGCAGC
TTAGGCAGCCCGCCGTTTTCTAGCGGTCTGGCATATCCGTTTGCTAGTTC
CTGTGCGGACAGTACGTCGCTTCCGTACAGGTCGTTCGATATCCTTATCG
CTTGCTGAATGGCCAGTTCTGCTATCCAATCGCTCGTATCGTCTTGTGCT
GCTTCCTTGATACGCAGAAAAACGTCCCGGATTATGCGGTGCTTGGATTC
CAGTACGTTCTTGTTGTGTCTTCTGGACGGTAGGGGTCGCGCTTCTATAT
CGAGTTTGGCAAGGTACTCACCGAAGATGCTGTTCTTGAATGCCTTGTCG
AAAGCTACCACTCGCGGTGCCCAGAACGGCGTAATCCAATGCGCGTCGAA
CACCAAAATCGCCTGCCGCATGGAGGTGTCAATGACTGCTGCGCCTACTG
AATAGCGCGACGTCGCGTCCATTACGTGCATCGCGCAGTACTCGTCGAGA
AACAGGTGATCCACGCATACTACTTCGTTGAATGACCTGGTCATGTTGCT
AAGCGATACCTTTCGCGTGTTCGCGGGCCTTGCAGTGGTCGCACACGCTG
TGCACCTCTCCAAGGTCTGCTGGAGGTAGTTGTCCACCTGCTGGTTCCAC
AGCTCGTTGCGCTGTAATAAAACCTTGATGTCAGAGTACGTGGAATGTCC
ACACACATGCTTGTGAACCTTGTCGACAATCCTCTTTAGGTCCCTCCATG
GTTTGTTTGCATGGTCTCCTTCCAGGTGAGCGGCTGCGCAGAAGAGAGTT
GTCTCTGTGTCGACCGTCATGTTGTCGGTACGAAAGGTAAACGCGGTGTG
GGGAATGCACGTGTGCATTTCGCGATCGATCAAGGAAATGCGTCCTTGAG
GTTCACCGCTCGCGTCTGGCGGCAGCTTTAGAACGTTCTGGTGGATGCGC
AGTATGTCGCAGTGATTGGTGACGTTTCTGCCTACTACCCATTGTGAGGA
GCCATCTACAACCAAATGACGGATACGTACACGTTTGCCTTCGTCGGTTT
GCGCTGTGAACATAACTGATCCAAGGATCTTCCTAGCTTCGCTGCTGTGC
TCCCCCTTTCCATACTGCCAATGAGTGTTGTCGCCAAGTGCTTCAGGTAG
TGGTTCCAGTTCTCCGTTCCATTCCGGACACACGATCTGGCTGATGAGCT
GCAGTTCGGTATATCCAATACCGCTGTAGGGCGCTGCGTTATCCAGAAGC
CGTCCAACAAATTCATCGACGCAATCGTCGGGCTTGTCTGCGGTGGCTGC
GTTCAATGTTGCCATATTGAACGTTATGAACTTATCTACGGCGGGTTCCG
ACCCTTTCGGAGCATCCAAGGCAACAAATCCGGGCTTCAATGACCCGTCC
TTGTTGTGGTCGTCGACCCAGTGGCCGAACTTCTTGCATCTGCGGCACCT
GGTTCTCCCCTTGAGGTCTGCCATCTCTTCTGGGGTCCTGCGCTGGCGCC
GAAATCCTCTCTTGCCGTTGTTTCTAGATGGGGTGTAGTTGGCAGAGTTG
CTGGAGACGGCCTTCGGCGAGGTGTCTCCTCCAGTTCCCTTCATCTTGTC
GAATTGCCTCAGCACAGAGGCGATCGCTTCATATGAGACGGCTTTCAGGT
AGTCACTGGTAGTTGATGCTGAAGCTACGCTTGCGTCCCTCGGCGCACCA
TTAGCCAAAACGGAGACTCTCTGATTGTTATCGACGTCTGCGTTTGCCAG
TAGTGCAAATGCCACCAGCGCGTCCGATAGCTTGGCCTCCGGTCCATGGG
CATTGAGCCTCGATACTTGCGCCTGGAAGCGAGACTCGAAGTTCTTGAAG
CTCTCGTGGTTGTTGCGCTTGGTGTTCAGTAGCGTGAGGAAGTCTTGAAA
CAAGTCTGATACAACCGCAAGCGGGTCTCGTTTGTACAAGGCCTCCACGA
TTGCGTTTGCACCTTCTGTCGATCGGATCGTAGAGTCTGGAATAGCCTTG
CACAAGTCTCGCGCGCGTCCGTACAGTTGCGACTGTAGCATAATTCCTTG
AGCCTCTTTCGAGACCTTGTTGCTGTTCGAGTCCGCGAGGGTATCCTGAA
ATGCCTGCCAAAGCGAAACGGCCTCGGCGTACTGCTGCTGATTTCCCCGT
CCATCGGTCCACGGTACGGTGCAAATATCCCAAGAAAAGCGGGGCCTGGT
CGGCAAGGGGTTTGAGCTTTCTGGGCCCATAACTAAGTAAAGGTTGGTTG
CAAATCAGTTTGTAGAAGCACTGTTTACTTGTTCTCTAGCGTTGGTCGTT
CGTAGCTTCTGCTTCCTTCTATTCTACGTTGATGGCTGCTTGCTGGGGTT
TTTATACCCGCGCTGACACACGTCGCATCCTGTAGTTCTTGGCCACGCAA
TCTCTAGTGCTCACCATGCGCACGGCCACGCAACACATACTGCTAACACT
ACGCAACGTCACACAATCTCTAATGCACTAGATAATATCTAATGATCAGC
AGCTCTCCCTGTGTCAGTTGCTTGCGTACAGTATTGCCATTTGCATTCTG
ACATGCAGTAGTTGCATTTGCGCGTTGCATTTTGCTGACACTGCGATGCG
TTAGTCTTCCAGCAACCAATGCAGCTGACAATTGCATTCATTGCATTCCA
TAATACCATCATAATCGAAACTCCATGGAAACAGTCTCCGAAAGATTGTT
CGACTCAGGTATTTCAGTGATACCTGTTAACCTCGGTGGTGCTGGTATAG
ATGCGGCTCTATCACATATCCCACCCTGTTCAAATGTAAATGGCAGCATA
GAAACAAACGTGGCAGAAGGACAGGCGAGCAACATGGAAAACAAGACCAA
CGGTGAAATGGTACAGATAGTCACATCGGAAAATCTCCTTCAAGCTGTTG
ACCGTGTGCGCAGGAGGCCCCCAAGACCGTATCATCCTGAACCGGGGGCA
GAAATCTCTATTTCTACGGAATATGTTGAAGCAGGTTTCCGTTATTACTA
TCTTCCGCAGCCGGGTGTGGATGGTTGTGAAGAGCGGATTATTGCAAATC
TAACAGGAATTCCAAGCTTCGTAAGCGAGCCCGCCGATTTGACGGGCAAG
GTGAAGCTGGAGCTTCCCAGTGGGATTTGCCAGAGTGGTCCGTTCTCGTG
CGAGTTTCGTATCCTGGACGGAAAAGGTGGGTACGAACAGGATGCTGGCC
GTTGGTATAGACCGCAAGTGAATACCAAAGTAATCACGGTTCACGCCTGC
GGTTCCTGA back to topCoding sequence (CDS) from alignment at tig00000022_pilon:88635..95193- >Ggra4285.t1 ID=Ggra4285.t1|Name=Ggra4285.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1161bp|location=Sequence derived from alignment at tig00000022_pilon:88635..95193- (Gracilaria gracilis GNS1m male) ATGGACATGCACCGCCAGTGCCAAAGACGAGAACAATTTGGATGCCTGTA CAGAAAGTATTCCGCCCACAACTTTCACTGCGCTCTGGATCCGGAAACTG CCGCCAATTATGAATGTCCAGATGGAATAGTTAGGATTAGAAATGTTACA CTGCGACCTAATCACCCCGTGGAGTTCAATCTCGCCGTGCATCTTGTCGG ACGTCCTCTTACTGTACATCTTCTCATCGATGCTAGTTCGTCGACGAGAC CACGCTTGGCCGAAGTTAAGCATGAGCTGATTCCGTTTGTTAGACAGCTC AACGGAACTGCTCACGTCGGAGTAAGAATCTTTGGAGGTGAACAGTATTT TAACGGAAGCGGATACATGGTGCTTTCTTCTGCTGAAGATGAAGACGTCC AACACGCGCTAAATGCACTTGAGAATATTCCTTCTTTCCCTGATGGAGTG CCTACAACAGCTAAAGCGCTGGGTGCAATAAGGCCTTCCGATGGCTATCT TTATGGGTATTATACTCGTGGAATTGTGATGCTAATTGGAGATACACCGG GGCGCGAATCTGATTGCTCACCATACCTAAGTAAAGTCTCCGAAAGATTG TTCGACTCAGGTATTTCAGTGATACCTGTTAACCTCGGTGGTGCTGGTAT AGATGCGGCTCTATCACATATCCCACCCTGTTCAAATGTAAATGGCAGCA TAGAAACAAACGTGGCAGAAGGACAGGCGAGCAACATGGAAAACAAGACC AACGGTGAAATGGTACAGATAGTCACATCGGAAAATCTCCTTCAAGCTGT TGACCGTGTGCGCAGGAGGCCCCCAAGACCGTATCATCCTGAACCGGGGG CAGAAATCTCTATTTCTACGGAATATGTTGAAGCAGGTTTCCGTTATTAC TATCTTCCGCAGCCGGGTGTGGATGGTTGTGAAGAGCGGATTATTGCAAA TCTAACAGGAATTCCAAGCTTCGTAAGCGAGCCCGCCGATTTGACGGGCA AGGTGAAGCTGGAGCTTCCCAGTGGGATTTGCCAGAGTGGTCCGTTCTCG TGCGAGTTTCGTATCCTGGACGGAAAAGGTGGGTACGAACAGGATGCTGG CCGTTGGTATAGACCGCAAGTGAATACCAAAGTAATCACGGTTCACGCCT GCGGTTCCTGA back to top
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