Ggra4283.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4283.t1
Unique NameGgra4283.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length246
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000022_piloncontigtig00000022_pilon:82428..83165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4283Ggra4283Gracilaria gracilis GNS1m malegenetig00000022_pilon 82428..83165 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4283.t1.stop1Ggra4283.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000022_pilon 82428..82430 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4283.t1.CDS1Ggra4283.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000022_pilon 82428..83165 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4283.t1.exon1Ggra4283.t1.exon1Gracilaria gracilis GNS1m maleexontig00000022_pilon 82428..83165 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4283.t1.start1Ggra4283.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000022_pilon 83163..83165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4283.t1Ggra4283.t1Gracilaria gracilis GNS1m malepolypeptidetig00000022_pilon 82428..83165 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4283.t1 ID=Ggra4283.t1|Name=Ggra4283.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=246bp
MVLKIVGVFAITALCILSEFSSVQATPVISSHTFHTATSVRQGRLSALKE
MLDELFEDKRVQRGFRDLLEFFTNNGVPIPDGKGPKGNKPEDEFSPENPF
GIDPPPQGPPTRNPSNRGKGNKPEDPENPANPFGIDPSPPGSKGSNKGKG
AKPEDRDNPDNPFGMDPPPPPRNKDDDRESGGFFGNDDEEGFGGDDDDDG
DDDRESGGSFGNDDEDGFGGDDDDDKGGRGGSGGCCGANDLPDSF*
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spliced messenger RNA

>Ggra4283.t1 ID=Ggra4283.t1|Name=Ggra4283.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=738bp|location=Sequence derived from alignment at tig00000022_pilon:82428..83165- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCTGAAAATTGTGGGAGTGTTTGCAATCACGGCACTCTGCATACT
GTCTGAATTCTCAAGTGTTCAAGCAACTCCGGTTATCAGCAGTCATACTT
TTCACACTGCAACCAGCGTTCGTCAAGGAAGACTATCTGCCCTTAAGGAG
ATGCTCGACGAACTGTTCGAAGACAAACGTGTGCAGAGAGGATTCAGGGA
TTTGTTAGAATTCTTCACAAACAACGGCGTCCCTATACCGGATGGTAAAG
GCCCGAAAGGTAATAAGCCAGAGGATGAGTTCAGTCCTGAAAATCCTTTT
GGAATCGATCCACCGCCGCAGGGTCCGCCTACACGTAATCCAAGCAATCG
AGGAAAAGGCAACAAGCCCGAAGACCCAGAAAACCCAGCAAATCCATTTG
GAATTGACCCTTCCCCGCCAGGATCTAAGGGAAGTAATAAGGGGAAAGGA
GCCAAGCCTGAAGACCGAGATAACCCAGATAATCCTTTTGGAATGGACCC
ACCTCCTCCACCGCGAAACAAGGATGACGATCGCGAAAGTGGTGGGTTCT
TTGGAAACGATGATGAGGAAGGTTTTGGAGGAGATGATGACGATGATGGC
GACGACGATCGTGAGAGTGGGGGTTCGTTTGGAAATGACGATGAGGATGG
TTTCGGTGGCGATGACGATGATGACAAAGGTGGCCGAGGGGGAAGTGGAG
GATGTTGTGGGGCTAATGATTTGCCAGACTCTTTCTAA
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protein sequence of Ggra4283.t1

>Ggra4283.t1 ID=Ggra4283.t1|Name=Ggra4283.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=246bp
MVLKIVGVFAITALCILSEFSSVQATPVISSHTFHTATSVRQGRLSALKE
MLDELFEDKRVQRGFRDLLEFFTNNGVPIPDGKGPKGNKPEDEFSPENPF
GIDPPPQGPPTRNPSNRGKGNKPEDPENPANPFGIDPSPPGSKGSNKGKG
AKPEDRDNPDNPFGMDPPPPPRNKDDDRESGGFFGNDDEEGFGGDDDDDG
DDDRESGGSFGNDDEDGFGGDDDDDKGGRGGSGGCCGANDLPDSF*
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mRNA from alignment at tig00000022_pilon:82428..83165-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4283.t1 ID=Ggra4283.t1|Name=Ggra4283.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=738bp|location=Sequence derived from alignment at tig00000022_pilon:82428..83165- (Gracilaria gracilis GNS1m male)
ATGGTTCTGAAAATTGTGGGAGTGTTTGCAATCACGGCACTCTGCATACT
GTCTGAATTCTCAAGTGTTCAAGCAACTCCGGTTATCAGCAGTCATACTT
TTCACACTGCAACCAGCGTTCGTCAAGGAAGACTATCTGCCCTTAAGGAG
ATGCTCGACGAACTGTTCGAAGACAAACGTGTGCAGAGAGGATTCAGGGA
TTTGTTAGAATTCTTCACAAACAACGGCGTCCCTATACCGGATGGTAAAG
GCCCGAAAGGTAATAAGCCAGAGGATGAGTTCAGTCCTGAAAATCCTTTT
GGAATCGATCCACCGCCGCAGGGTCCGCCTACACGTAATCCAAGCAATCG
AGGAAAAGGCAACAAGCCCGAAGACCCAGAAAACCCAGCAAATCCATTTG
GAATTGACCCTTCCCCGCCAGGATCTAAGGGAAGTAATAAGGGGAAAGGA
GCCAAGCCTGAAGACCGAGATAACCCAGATAATCCTTTTGGAATGGACCC
ACCTCCTCCACCGCGAAACAAGGATGACGATCGCGAAAGTGGTGGGTTCT
TTGGAAACGATGATGAGGAAGGTTTTGGAGGAGATGATGACGATGATGGC
GACGACGATCGTGAGAGTGGGGGTTCGTTTGGAAATGACGATGAGGATGG
TTTCGGTGGCGATGACGATGATGACAAAGGTGGCCGAGGGGGAAGTGGAG
GATGTTGTGGGGCTAATGATTTGCCAGACTCTTTCTAA
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Coding sequence (CDS) from alignment at tig00000022_pilon:82428..83165-

>Ggra4283.t1 ID=Ggra4283.t1|Name=Ggra4283.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=738bp|location=Sequence derived from alignment at tig00000022_pilon:82428..83165- (Gracilaria gracilis GNS1m male)
ATGGTTCTGAAAATTGTGGGAGTGTTTGCAATCACGGCACTCTGCATACT
GTCTGAATTCTCAAGTGTTCAAGCAACTCCGGTTATCAGCAGTCATACTT
TTCACACTGCAACCAGCGTTCGTCAAGGAAGACTATCTGCCCTTAAGGAG
ATGCTCGACGAACTGTTCGAAGACAAACGTGTGCAGAGAGGATTCAGGGA
TTTGTTAGAATTCTTCACAAACAACGGCGTCCCTATACCGGATGGTAAAG
GCCCGAAAGGTAATAAGCCAGAGGATGAGTTCAGTCCTGAAAATCCTTTT
GGAATCGATCCACCGCCGCAGGGTCCGCCTACACGTAATCCAAGCAATCG
AGGAAAAGGCAACAAGCCCGAAGACCCAGAAAACCCAGCAAATCCATTTG
GAATTGACCCTTCCCCGCCAGGATCTAAGGGAAGTAATAAGGGGAAAGGA
GCCAAGCCTGAAGACCGAGATAACCCAGATAATCCTTTTGGAATGGACCC
ACCTCCTCCACCGCGAAACAAGGATGACGATCGCGAAAGTGGTGGGTTCT
TTGGAAACGATGATGAGGAAGGTTTTGGAGGAGATGATGACGATGATGGC
GACGACGATCGTGAGAGTGGGGGTTCGTTTGGAAATGACGATGAGGATGG
TTTCGGTGGCGATGACGATGATGACAAAGGTGGCCGAGGGGGAAGTGGAG
GATGTTGTGGGGCTAATGATTTGCCAGACTCTTTCTAA
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