Ggra4275.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4275.t1
Unique NameGgra4275.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000944_piloncontigtig00000944_pilon:37707..38822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4275Ggra4275Gracilaria gracilis GNS1m malegenetig00000944_pilon 37707..38822 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4275.t1.start1Ggra4275.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000944_pilon 37707..37709 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4275.t1.CDS1Ggra4275.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000944_pilon 37707..38822 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4275.t1.exon1Ggra4275.t1.exon1Gracilaria gracilis GNS1m maleexontig00000944_pilon 37707..38822 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4275.t1.stop1Ggra4275.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000944_pilon 38820..38822 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4275.t1Ggra4275.t1Gracilaria gracilis GNS1m malepolypeptidetig00000944_pilon 37707..38822 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4275.t1 ID=Ggra4275.t1|Name=Ggra4275.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp
MFGKGMKVEKLGLGKMVPWICKKTKDSMTMKKEGLKVLEAAANMLTNPAE
KAMEKLLSFAVHELPKLLDHIAQREKENSCSNYWKHFQGRFGGPSNADET
PSEFNRPSSDSRPSHAAKHTVHADNDRAPNKNESFRNTKDGRVKRGDSSL
SNSTRVRCWNPLFHNEEHEERGRNGISRSKRGFHAFDYISTDDEDASYTP
NEPGLVDLREEANRRPVPAIAIPLPPIAQKHYERFVRLRQQEVYTQVLSR
QRNPSLPPGPPSRCIRKSRRESRRGFRDSEATPKLFQTKRDISDLVQTKA
AGLQERSEKKRGKKQPPVKENEPGPNRLYATHALRNNCSLEESRAVYYLM
GTDLFRKRKVEHIMFDKDFEY*
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spliced messenger RNA

>Ggra4275.t1 ID=Ggra4275.t1|Name=Ggra4275.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000944_pilon:37707..38822+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTGGCAAAGGAATGAAGGTGGAAAAGTTGGGACTCGGCAAAATGGT
TCCATGGATATGTAAGAAGACGAAGGACAGCATGACGATGAAAAAGGAAG
GGCTTAAAGTACTAGAAGCTGCCGCCAATATGCTGACAAACCCGGCAGAA
AAAGCAATGGAGAAGCTGCTTAGTTTCGCAGTACATGAACTCCCAAAGTT
GCTCGACCACATTGCTCAACGTGAAAAGGAGAATAGTTGTAGCAACTACT
GGAAGCATTTCCAAGGCCGATTTGGTGGTCCTTCGAACGCTGATGAAACT
CCATCAGAATTCAACCGTCCTTCATCAGATTCCCGCCCATCCCATGCTGC
GAAACACACGGTCCATGCAGACAACGACCGGGCTCCGAACAAGAATGAGA
GCTTTAGGAACACAAAGGACGGGCGTGTTAAACGCGGTGATTCTTCTCTG
AGTAACTCTACCAGAGTTCGTTGCTGGAATCCTCTCTTTCACAATGAGGA
ACACGAAGAAAGAGGTAGAAATGGAATCTCACGAAGCAAAAGGGGTTTCC
ATGCATTTGACTACATCAGCACAGACGACGAGGATGCGTCCTATACTCCA
AATGAACCGGGGTTGGTGGATCTACGCGAGGAAGCAAATAGGCGTCCAGT
ACCGGCGATTGCAATACCGTTGCCGCCGATTGCACAGAAACATTATGAAC
GTTTTGTTCGCCTACGACAACAAGAAGTGTACACGCAGGTTCTTAGTCGC
CAGAGAAATCCTTCTCTTCCTCCTGGTCCTCCTTCCCGTTGTATTCGTAA
GTCTCGTCGTGAGTCTCGTCGTGGATTTCGCGACTCTGAAGCAACTCCGA
AACTGTTCCAGACCAAGAGAGATATATCGGATCTTGTACAAACAAAAGCA
GCAGGTTTGCAAGAGCGTTCGGAGAAGAAGAGAGGAAAGAAACAGCCTCC
GGTCAAGGAGAACGAGCCGGGGCCAAATAGATTATATGCCACACACGCCT
TGCGCAATAATTGCTCATTAGAGGAGAGCAGAGCGGTCTACTACTTGATG
GGGACTGATCTGTTCAGAAAGAGAAAAGTAGAACACATAATGTTTGACAA
AGACTTCGAGTACTAG
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protein sequence of Ggra4275.t1

>Ggra4275.t1 ID=Ggra4275.t1|Name=Ggra4275.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MFGKGMKVEKLGLGKMVPWICKKTKDSMTMKKEGLKVLEAAANMLTNPAE
KAMEKLLSFAVHELPKLLDHIAQREKENSCSNYWKHFQGRFGGPSNADET
PSEFNRPSSDSRPSHAAKHTVHADNDRAPNKNESFRNTKDGRVKRGDSSL
SNSTRVRCWNPLFHNEEHEERGRNGISRSKRGFHAFDYISTDDEDASYTP
NEPGLVDLREEANRRPVPAIAIPLPPIAQKHYERFVRLRQQEVYTQVLSR
QRNPSLPPGPPSRCIRKSRRESRRGFRDSEATPKLFQTKRDISDLVQTKA
AGLQERSEKKRGKKQPPVKENEPGPNRLYATHALRNNCSLEESRAVYYLM
GTDLFRKRKVEHIMFDKDFEY*
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mRNA from alignment at tig00000944_pilon:37707..38822+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4275.t1 ID=Ggra4275.t1|Name=Ggra4275.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000944_pilon:37707..38822+ (Gracilaria gracilis GNS1m male)
ATGTTTGGCAAAGGAATGAAGGTGGAAAAGTTGGGACTCGGCAAAATGGT
TCCATGGATATGTAAGAAGACGAAGGACAGCATGACGATGAAAAAGGAAG
GGCTTAAAGTACTAGAAGCTGCCGCCAATATGCTGACAAACCCGGCAGAA
AAAGCAATGGAGAAGCTGCTTAGTTTCGCAGTACATGAACTCCCAAAGTT
GCTCGACCACATTGCTCAACGTGAAAAGGAGAATAGTTGTAGCAACTACT
GGAAGCATTTCCAAGGCCGATTTGGTGGTCCTTCGAACGCTGATGAAACT
CCATCAGAATTCAACCGTCCTTCATCAGATTCCCGCCCATCCCATGCTGC
GAAACACACGGTCCATGCAGACAACGACCGGGCTCCGAACAAGAATGAGA
GCTTTAGGAACACAAAGGACGGGCGTGTTAAACGCGGTGATTCTTCTCTG
AGTAACTCTACCAGAGTTCGTTGCTGGAATCCTCTCTTTCACAATGAGGA
ACACGAAGAAAGAGGTAGAAATGGAATCTCACGAAGCAAAAGGGGTTTCC
ATGCATTTGACTACATCAGCACAGACGACGAGGATGCGTCCTATACTCCA
AATGAACCGGGGTTGGTGGATCTACGCGAGGAAGCAAATAGGCGTCCAGT
ACCGGCGATTGCAATACCGTTGCCGCCGATTGCACAGAAACATTATGAAC
GTTTTGTTCGCCTACGACAACAAGAAGTGTACACGCAGGTTCTTAGTCGC
CAGAGAAATCCTTCTCTTCCTCCTGGTCCTCCTTCCCGTTGTATTCGTAA
GTCTCGTCGTGAGTCTCGTCGTGGATTTCGCGACTCTGAAGCAACTCCGA
AACTGTTCCAGACCAAGAGAGATATATCGGATCTTGTACAAACAAAAGCA
GCAGGTTTGCAAGAGCGTTCGGAGAAGAAGAGAGGAAAGAAACAGCCTCC
GGTCAAGGAGAACGAGCCGGGGCCAAATAGATTATATGCCACACACGCCT
TGCGCAATAATTGCTCATTAGAGGAGAGCAGAGCGGTCTACTACTTGATG
GGGACTGATCTGTTCAGAAAGAGAAAAGTAGAACACATAATGTTTGACAA
AGACTTCGAGTACTAG
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Coding sequence (CDS) from alignment at tig00000944_pilon:37707..38822+

>Ggra4275.t1 ID=Ggra4275.t1|Name=Ggra4275.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1116bp|location=Sequence derived from alignment at tig00000944_pilon:37707..38822+ (Gracilaria gracilis GNS1m male)
ATGTTTGGCAAAGGAATGAAGGTGGAAAAGTTGGGACTCGGCAAAATGGT
TCCATGGATATGTAAGAAGACGAAGGACAGCATGACGATGAAAAAGGAAG
GGCTTAAAGTACTAGAAGCTGCCGCCAATATGCTGACAAACCCGGCAGAA
AAAGCAATGGAGAAGCTGCTTAGTTTCGCAGTACATGAACTCCCAAAGTT
GCTCGACCACATTGCTCAACGTGAAAAGGAGAATAGTTGTAGCAACTACT
GGAAGCATTTCCAAGGCCGATTTGGTGGTCCTTCGAACGCTGATGAAACT
CCATCAGAATTCAACCGTCCTTCATCAGATTCCCGCCCATCCCATGCTGC
GAAACACACGGTCCATGCAGACAACGACCGGGCTCCGAACAAGAATGAGA
GCTTTAGGAACACAAAGGACGGGCGTGTTAAACGCGGTGATTCTTCTCTG
AGTAACTCTACCAGAGTTCGTTGCTGGAATCCTCTCTTTCACAATGAGGA
ACACGAAGAAAGAGGTAGAAATGGAATCTCACGAAGCAAAAGGGGTTTCC
ATGCATTTGACTACATCAGCACAGACGACGAGGATGCGTCCTATACTCCA
AATGAACCGGGGTTGGTGGATCTACGCGAGGAAGCAAATAGGCGTCCAGT
ACCGGCGATTGCAATACCGTTGCCGCCGATTGCACAGAAACATTATGAAC
GTTTTGTTCGCCTACGACAACAAGAAGTGTACACGCAGGTTCTTAGTCGC
CAGAGAAATCCTTCTCTTCCTCCTGGTCCTCCTTCCCGTTGTATTCGTAA
GTCTCGTCGTGAGTCTCGTCGTGGATTTCGCGACTCTGAAGCAACTCCGA
AACTGTTCCAGACCAAGAGAGATATATCGGATCTTGTACAAACAAAAGCA
GCAGGTTTGCAAGAGCGTTCGGAGAAGAAGAGAGGAAAGAAACAGCCTCC
GGTCAAGGAGAACGAGCCGGGGCCAAATAGATTATATGCCACACACGCCT
TGCGCAATAATTGCTCATTAGAGGAGAGCAGAGCGGTCTACTACTTGATG
GGGACTGATCTGTTCAGAAAGAGAAAAGTAGAACACATAATGTTTGACAA
AGACTTCGAGTACTAG
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