Ggra4256.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4256.t1
Unique NameGgra4256.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length169
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:429043..429549 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4256Ggra4256Gracilaria gracilis GNS1m malegenetig00000880_pilon 429043..429549 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4256.t1.start1Ggra4256.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000880_pilon 429043..429045 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4256.t1.CDS1Ggra4256.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000880_pilon 429043..429549 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4256.t1.exon1Ggra4256.t1.exon1Gracilaria gracilis GNS1m maleexontig00000880_pilon 429043..429549 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4256.t1.stop1Ggra4256.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000880_pilon 429547..429549 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4256.t1Ggra4256.t1Gracilaria gracilis GNS1m malepolypeptidetig00000880_pilon 429043..429549 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4256.t1 ID=Ggra4256.t1|Name=Ggra4256.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=169bp
MRISTFIFVLAATATAIVAIPITDYCERAASSCKFNFEATCGIPSFSLGG
APNTPFTPRIVSKTSQELVGVMQSSNISPEFLYGYYYIPVFARGFSRSQF
RPLTLSSHDGSAIGFEQFDGNKQQAQGQCVRVYFTAYQRQRFGGSVENVV
VSAEQARRDDLCVVFRTL*
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spliced messenger RNA

>Ggra4256.t1 ID=Ggra4256.t1|Name=Ggra4256.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=507bp|location=Sequence derived from alignment at tig00000880_pilon:429043..429549+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCATCTCCACATTCATCTTCGTTCTCGCCGCCACCGCAACAGCGAT
AGTCGCGATACCCATAACGGACTATTGCGAGCGCGCTGCATCCAGCTGCA
AGTTTAACTTCGAAGCCACTTGCGGCATTCCGTCCTTCTCGCTGGGCGGG
GCACCGAACACGCCGTTTACACCACGAATCGTATCGAAAACTTCGCAAGA
GCTTGTTGGTGTGATGCAGTCGAGTAACATCTCGCCAGAGTTCCTGTACG
GCTACTACTACATACCAGTGTTTGCGAGAGGCTTTTCGCGCTCTCAATTC
CGGCCGCTGACTCTGTCGAGCCATGACGGCTCCGCCATTGGGTTTGAACA
GTTTGATGGCAACAAGCAACAGGCTCAGGGTCAATGTGTTCGCGTGTACT
TCACGGCTTATCAGCGACAAAGGTTTGGTGGCAGCGTGGAGAATGTGGTT
GTATCTGCCGAGCAGGCGAGACGCGATGACCTGTGCGTGGTTTTCCGCAC
GCTTTGA
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protein sequence of Ggra4256.t1

>Ggra4256.t1 ID=Ggra4256.t1|Name=Ggra4256.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=169bp
MRISTFIFVLAATATAIVAIPITDYCERAASSCKFNFEATCGIPSFSLGG
APNTPFTPRIVSKTSQELVGVMQSSNISPEFLYGYYYIPVFARGFSRSQF
RPLTLSSHDGSAIGFEQFDGNKQQAQGQCVRVYFTAYQRQRFGGSVENVV
VSAEQARRDDLCVVFRTL*
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mRNA from alignment at tig00000880_pilon:429043..429549+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4256.t1 ID=Ggra4256.t1|Name=Ggra4256.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=507bp|location=Sequence derived from alignment at tig00000880_pilon:429043..429549+ (Gracilaria gracilis GNS1m male)
ATGCGCATCTCCACATTCATCTTCGTTCTCGCCGCCACCGCAACAGCGAT
AGTCGCGATACCCATAACGGACTATTGCGAGCGCGCTGCATCCAGCTGCA
AGTTTAACTTCGAAGCCACTTGCGGCATTCCGTCCTTCTCGCTGGGCGGG
GCACCGAACACGCCGTTTACACCACGAATCGTATCGAAAACTTCGCAAGA
GCTTGTTGGTGTGATGCAGTCGAGTAACATCTCGCCAGAGTTCCTGTACG
GCTACTACTACATACCAGTGTTTGCGAGAGGCTTTTCGCGCTCTCAATTC
CGGCCGCTGACTCTGTCGAGCCATGACGGCTCCGCCATTGGGTTTGAACA
GTTTGATGGCAACAAGCAACAGGCTCAGGGTCAATGTGTTCGCGTGTACT
TCACGGCTTATCAGCGACAAAGGTTTGGTGGCAGCGTGGAGAATGTGGTT
GTATCTGCCGAGCAGGCGAGACGCGATGACCTGTGCGTGGTTTTCCGCAC
GCTTTGA
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Coding sequence (CDS) from alignment at tig00000880_pilon:429043..429549+

>Ggra4256.t1 ID=Ggra4256.t1|Name=Ggra4256.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=507bp|location=Sequence derived from alignment at tig00000880_pilon:429043..429549+ (Gracilaria gracilis GNS1m male)
ATGCGCATCTCCACATTCATCTTCGTTCTCGCCGCCACCGCAACAGCGAT
AGTCGCGATACCCATAACGGACTATTGCGAGCGCGCTGCATCCAGCTGCA
AGTTTAACTTCGAAGCCACTTGCGGCATTCCGTCCTTCTCGCTGGGCGGG
GCACCGAACACGCCGTTTACACCACGAATCGTATCGAAAACTTCGCAAGA
GCTTGTTGGTGTGATGCAGTCGAGTAACATCTCGCCAGAGTTCCTGTACG
GCTACTACTACATACCAGTGTTTGCGAGAGGCTTTTCGCGCTCTCAATTC
CGGCCGCTGACTCTGTCGAGCCATGACGGCTCCGCCATTGGGTTTGAACA
GTTTGATGGCAACAAGCAACAGGCTCAGGGTCAATGTGTTCGCGTGTACT
TCACGGCTTATCAGCGACAAAGGTTTGGTGGCAGCGTGGAGAATGTGGTT
GTATCTGCCGAGCAGGCGAGACGCGATGACCTGTGCGTGGTTTTCCGCAC
GCTTTGA
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