Ggra4255.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4255.t1
Unique NameGgra4255.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length206
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:422463..423080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4255Ggra4255Gracilaria gracilis GNS1m malegenetig00000880_pilon 422463..423080 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4255.t1.stop1Ggra4255.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000880_pilon 422463..422465 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4255.t1.CDS1Ggra4255.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000880_pilon 422463..423080 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4255.t1.exon1Ggra4255.t1.exon1Gracilaria gracilis GNS1m maleexontig00000880_pilon 422463..423080 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4255.t1.start1Ggra4255.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000880_pilon 423078..423080 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4255.t1Ggra4255.t1Gracilaria gracilis GNS1m malepolypeptidetig00000880_pilon 422463..423080 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4255.t1 ID=Ggra4255.t1|Name=Ggra4255.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=206bp
MDLFHSSMYTLVPKLRFSKSFSAGSMTKHHTVYDTGMYTHVQSENTTGNA
VRAVCRLKLKPTLMNIREVTALQSEDPGWFFARAFHFTSRTTQSFFRALT
IDFEKSVEACASLRAGQTDNQCSLQYSSNQGILRNDISDCLEHLCQLTGV
NKGSLPSVENGQKAANQNHDRNLRVAQWSPERASHWSHGFCWAKIAPVVE
QSNAN*
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spliced messenger RNA

>Ggra4255.t1 ID=Ggra4255.t1|Name=Ggra4255.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=618bp|location=Sequence derived from alignment at tig00000880_pilon:422463..423080- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACCTATTTCATTCTTCTATGTACACACTGGTGCCTAAGCTGAGATT
TTCGAAGTCGTTCTCCGCTGGGTCTATGACAAAACACCATACTGTCTATG
ACACTGGCATGTATACACATGTACAATCAGAAAACACTACAGGCAATGCT
GTACGTGCTGTGTGTCGCCTTAAGCTCAAACCAACTCTCATGAACATCAG
AGAAGTAACAGCATTGCAGTCAGAAGACCCTGGATGGTTCTTTGCCAGAG
CCTTTCATTTCACCTCTCGAACGACTCAATCCTTTTTTAGGGCGCTTACA
ATTGACTTTGAAAAGTCCGTGGAAGCGTGTGCGTCGTTGCGTGCTGGACA
AACTGACAATCAATGCTCCTTACAATACTCCAGCAATCAGGGCATTTTGC
GTAACGACATTTCGGATTGTTTGGAACATCTTTGCCAGCTAACTGGCGTG
AACAAAGGCTCACTACCGTCGGTTGAAAATGGACAGAAAGCCGCGAATCA
AAATCATGACCGCAACCTCAGAGTGGCTCAATGGTCGCCAGAAAGAGCAA
GTCATTGGTCTCATGGCTTCTGTTGGGCAAAGATCGCCCCGGTCGTTGAG
CAAAGCAACGCTAATTGA
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protein sequence of Ggra4255.t1

>Ggra4255.t1 ID=Ggra4255.t1|Name=Ggra4255.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=206bp
MDLFHSSMYTLVPKLRFSKSFSAGSMTKHHTVYDTGMYTHVQSENTTGNA
VRAVCRLKLKPTLMNIREVTALQSEDPGWFFARAFHFTSRTTQSFFRALT
IDFEKSVEACASLRAGQTDNQCSLQYSSNQGILRNDISDCLEHLCQLTGV
NKGSLPSVENGQKAANQNHDRNLRVAQWSPERASHWSHGFCWAKIAPVVE
QSNAN*
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mRNA from alignment at tig00000880_pilon:422463..423080-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4255.t1 ID=Ggra4255.t1|Name=Ggra4255.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=618bp|location=Sequence derived from alignment at tig00000880_pilon:422463..423080- (Gracilaria gracilis GNS1m male)
ATGGACCTATTTCATTCTTCTATGTACACACTGGTGCCTAAGCTGAGATT
TTCGAAGTCGTTCTCCGCTGGGTCTATGACAAAACACCATACTGTCTATG
ACACTGGCATGTATACACATGTACAATCAGAAAACACTACAGGCAATGCT
GTACGTGCTGTGTGTCGCCTTAAGCTCAAACCAACTCTCATGAACATCAG
AGAAGTAACAGCATTGCAGTCAGAAGACCCTGGATGGTTCTTTGCCAGAG
CCTTTCATTTCACCTCTCGAACGACTCAATCCTTTTTTAGGGCGCTTACA
ATTGACTTTGAAAAGTCCGTGGAAGCGTGTGCGTCGTTGCGTGCTGGACA
AACTGACAATCAATGCTCCTTACAATACTCCAGCAATCAGGGCATTTTGC
GTAACGACATTTCGGATTGTTTGGAACATCTTTGCCAGCTAACTGGCGTG
AACAAAGGCTCACTACCGTCGGTTGAAAATGGACAGAAAGCCGCGAATCA
AAATCATGACCGCAACCTCAGAGTGGCTCAATGGTCGCCAGAAAGAGCAA
GTCATTGGTCTCATGGCTTCTGTTGGGCAAAGATCGCCCCGGTCGTTGAG
CAAAGCAACGCTAATTGA
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Coding sequence (CDS) from alignment at tig00000880_pilon:422463..423080-

>Ggra4255.t1 ID=Ggra4255.t1|Name=Ggra4255.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=618bp|location=Sequence derived from alignment at tig00000880_pilon:422463..423080- (Gracilaria gracilis GNS1m male)
ATGGACCTATTTCATTCTTCTATGTACACACTGGTGCCTAAGCTGAGATT
TTCGAAGTCGTTCTCCGCTGGGTCTATGACAAAACACCATACTGTCTATG
ACACTGGCATGTATACACATGTACAATCAGAAAACACTACAGGCAATGCT
GTACGTGCTGTGTGTCGCCTTAAGCTCAAACCAACTCTCATGAACATCAG
AGAAGTAACAGCATTGCAGTCAGAAGACCCTGGATGGTTCTTTGCCAGAG
CCTTTCATTTCACCTCTCGAACGACTCAATCCTTTTTTAGGGCGCTTACA
ATTGACTTTGAAAAGTCCGTGGAAGCGTGTGCGTCGTTGCGTGCTGGACA
AACTGACAATCAATGCTCCTTACAATACTCCAGCAATCAGGGCATTTTGC
GTAACGACATTTCGGATTGTTTGGAACATCTTTGCCAGCTAACTGGCGTG
AACAAAGGCTCACTACCGTCGGTTGAAAATGGACAGAAAGCCGCGAATCA
AAATCATGACCGCAACCTCAGAGTGGCTCAATGGTCGCCAGAAAGAGCAA
GTCATTGGTCTCATGGCTTCTGTTGGGCAAAGATCGCCCCGGTCGTTGAG
CAAAGCAACGCTAATTGA
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