|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4243.t1.start1 | Ggra4243.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000880_pilon 328830..328832 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4243.t1.stop1 | Ggra4243.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000880_pilon 331419..331421 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra4243.t1 ID=Ggra4243.t1|Name=Ggra4243.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=864bp MQPLTSDSEIDLNPSPDYASSLYLRCPRIRMLYRSLRDDSIPLRPRSPLG TDSSLSSPPPPAKVAPPDSRDVPNTCSVDVAPPSDEQLGLPSAVDAAMDD IPIAMRPLATTLWKAPHVSVLQGYTRSQAATAVAYALNLHRAAGGARAVL VIARVASTAKVWQQKLSANLDEVKVRTLRSGVYSTRRPCLNSLRMEQSPG VWILTGKALKDDASWNDIRQALRENRVTNTWDMVISEAQGGDSTLNLRHS PFRMVADKQARAGMFVMCSNEVLHVRKEQFSEHAVREFIQTQLPSSPYLS DESVWITPTSIGGIPLKRSNRSRRKSSAQDLEQLRRKADALVSKIQRTPP VYQQISAKEVEEDEDVHIPNVDPEPKRMNGDKSVSRRFSMSINASRTRKR TSTVRLPLQEIRTPTSTRREPRKSSASRPSRRVSPPHEVTAMRSRARTRR RSPSQDISSRQSYDRRSVSIIELSDDDESEIEWHTPLSQLVIPSSFLGKG EEINDSSDEEEWKTAYASRRKSRINTGRGGGSRAKSRNARLSRDHERHSG GRRDSELALPGPRMKRLSCALDAGLESPDTFPSTNVLDSEESSLDMNIGP GKRVSGGRKVFRRRRVSNERHFGRRLSSRRSMSSENSLYAEEEATPISSP FESVRRRKNSSSASSCLNGVFDTPTVRRNMSFVEILDSDIEVVDDREVIN LISDDEDEGFVRRSLARNNESEMSHVVSVEHADMHTVHVESQDEEEMSYG SSLILTGVTKYNPQPDSLTQPERRKYNTWLRRARRAEARGPDGYDAAINL YMKCLTLCDEDDHLASRILSLTNETGILSSKDFYEGRRTSRISKRTRPPR RRLRRLCSSDSSS* back to topspliced messenger RNA >Ggra4243.t1 ID=Ggra4243.t1|Name=Ggra4243.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2592bp|location=Sequence derived from alignment at tig00000880_pilon:328830..331421+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCCGCTCACCTCTGACAGCGAAATCGACCTGAACCCTTCGCCGGA CTATGCTTCGTCCCTCTATCTGCGATGTCCCCGCATACGAATGCTATACC GCTCGTTGAGAGATGACTCCATCCCTCTAAGACCGCGGTCGCCCCTCGGA ACAGACTCCTCACTCTCCTCCCCTCCCCCACCAGCAAAGGTGGCCCCGCC CGACTCGCGTGATGTTCCTAACACCTGTTCTGTTGACGTTGCGCCGCCGT CGGACGAGCAGCTTGGACTACCGTCTGCCGTCGATGCTGCTATGGACGAC ATCCCCATCGCGATGAGGCCTCTCGCCACGACGCTTTGGAAGGCGCCGCA CGTGTCCGTGCTTCAGGGATATACACGCTCACAAGCTGCTACCGCCGTTG CGTATGCTCTTAACTTGCATAGAGCCGCGGGAGGTGCTCGCGCTGTGTTG GTCATTGCACGTGTTGCGTCGACGGCCAAAGTATGGCAACAGAAGCTCAG TGCCAATCTTGACGAGGTGAAGGTCAGAACCTTGCGTAGCGGTGTTTATT CGACGCGGCGCCCTTGCCTCAATTCTCTGCGTATGGAACAGTCACCTGGC GTTTGGATTCTAACAGGTAAGGCTTTGAAGGATGACGCTAGTTGGAACGA TATACGACAGGCGCTCAGGGAAAACCGTGTTACCAATACGTGGGATATGG TCATCTCAGAGGCTCAGGGAGGTGATTCTACTTTGAATCTTCGTCATTCC CCGTTTCGAATGGTGGCTGACAAACAGGCTCGCGCGGGTATGTTCGTCAT GTGTTCGAATGAAGTTCTCCATGTACGCAAGGAACAATTTTCAGAGCACG CTGTACGCGAGTTTATTCAAACGCAGCTTCCTTCTTCGCCCTATTTGAGC GACGAATCAGTGTGGATCACCCCTACGTCTATTGGGGGCATTCCTCTGAA AAGGTCAAATCGTTCAAGGCGCAAGTCCAGTGCGCAAGATCTTGAACAGT TACGACGAAAGGCAGATGCGCTTGTTTCGAAGATACAGAGAACCCCGCCA GTATATCAGCAAATTTCCGCGAAGGAAGTTGAAGAAGACGAAGATGTGCA TATCCCCAATGTTGACCCCGAGCCAAAGCGGATGAACGGGGACAAGAGTG TGTCTAGGAGGTTCTCTATGTCCATTAATGCGTCACGCACTCGAAAAAGA ACCTCCACTGTGCGATTGCCGCTGCAGGAGATTAGAACACCAACAAGCAC CAGACGAGAACCTCGTAAAAGTAGTGCCTCTCGCCCCAGTCGACGAGTGT CTCCACCGCACGAAGTTACAGCTATGCGATCAAGAGCCCGAACTAGACGA CGGTCGCCATCTCAAGATATCTCATCTCGTCAAAGTTATGATCGACGCTC AGTCAGTATTATTGAACTCTCAGATGATGATGAATCAGAAATTGAGTGGC ATACGCCTCTGAGCCAACTCGTTATTCCCTCTTCATTTTTGGGCAAAGGT GAAGAGATCAATGACTCGTCAGATGAAGAAGAATGGAAAACTGCGTACGC CTCTCGCCGAAAGTCGAGGATCAACACGGGCCGCGGTGGAGGGAGTCGAG CCAAGAGCCGGAACGCTCGACTCTCGAGGGATCATGAACGTCACAGCGGA GGCCGTCGGGACTCGGAATTAGCGTTGCCCGGTCCCCGGATGAAAAGGCT TTCATGCGCGCTGGATGCCGGGCTTGAGAGTCCTGATACCTTTCCATCGA CAAACGTTCTTGATAGTGAAGAAAGCTCTCTAGATATGAATATAGGACCT GGAAAGCGTGTTTCTGGCGGAAGGAAAGTATTCCGAAGACGAAGGGTTTC GAACGAAAGGCATTTCGGTAGGAGACTTAGTTCTCGTCGATCGATGAGTT CTGAGAACTCGCTTTATGCCGAAGAGGAAGCGACTCCTATTAGTTCCCCG TTTGAATCTGTTCGAAGGCGCAAGAACAGCTCCTCTGCTTCAAGTTGTCT AAATGGGGTCTTTGACACCCCCACGGTACGAAGAAATATGTCGTTTGTTG AAATTCTCGATAGTGACATTGAAGTAGTGGATGATCGCGAAGTGATTAAT TTGATCTCAGATGATGAAGACGAAGGTTTTGTCCGACGCTCTCTAGCTCG CAACAATGAGTCGGAAATGTCTCATGTTGTTTCCGTGGAACATGCGGATA TGCATACCGTTCATGTAGAAAGTCAAGATGAGGAGGAGATGAGCTACGGC TCATCTCTTATTCTAACAGGTGTGACCAAATACAATCCACAACCTGACTC ATTAACCCAACCTGAGCGACGGAAGTACAACACATGGCTGCGAAGGGCAA GAAGAGCTGAAGCTCGCGGGCCGGATGGATATGATGCGGCAATCAACCTT TACATGAAATGTCTCACTTTGTGTGATGAAGATGATCATCTGGCCAGTAG GATTTTGTCTCTGACTAACGAAACCGGGATTCTATCGTCTAAAGATTTCT ACGAAGGCCGGAGAACCTCACGAATCTCAAAAAGAACCCGTCCCCCAAGG CGTCGGCTGAGGCGCCTTTGCAGCAGCGATAGTAGCAGTTAG back to topprotein sequence of Ggra4243.t1 >Ggra4243.t1 ID=Ggra4243.t1|Name=Ggra4243.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=864bp
MQPLTSDSEIDLNPSPDYASSLYLRCPRIRMLYRSLRDDSIPLRPRSPLG TDSSLSSPPPPAKVAPPDSRDVPNTCSVDVAPPSDEQLGLPSAVDAAMDD IPIAMRPLATTLWKAPHVSVLQGYTRSQAATAVAYALNLHRAAGGARAVL VIARVASTAKVWQQKLSANLDEVKVRTLRSGVYSTRRPCLNSLRMEQSPG VWILTGKALKDDASWNDIRQALRENRVTNTWDMVISEAQGGDSTLNLRHS PFRMVADKQARAGMFVMCSNEVLHVRKEQFSEHAVREFIQTQLPSSPYLS DESVWITPTSIGGIPLKRSNRSRRKSSAQDLEQLRRKADALVSKIQRTPP VYQQISAKEVEEDEDVHIPNVDPEPKRMNGDKSVSRRFSMSINASRTRKR TSTVRLPLQEIRTPTSTRREPRKSSASRPSRRVSPPHEVTAMRSRARTRR RSPSQDISSRQSYDRRSVSIIELSDDDESEIEWHTPLSQLVIPSSFLGKG EEINDSSDEEEWKTAYASRRKSRINTGRGGGSRAKSRNARLSRDHERHSG GRRDSELALPGPRMKRLSCALDAGLESPDTFPSTNVLDSEESSLDMNIGP GKRVSGGRKVFRRRRVSNERHFGRRLSSRRSMSSENSLYAEEEATPISSP FESVRRRKNSSSASSCLNGVFDTPTVRRNMSFVEILDSDIEVVDDREVIN LISDDEDEGFVRRSLARNNESEMSHVVSVEHADMHTVHVESQDEEEMSYG SSLILTGVTKYNPQPDSLTQPERRKYNTWLRRARRAEARGPDGYDAAINL YMKCLTLCDEDDHLASRILSLTNETGILSSKDFYEGRRTSRISKRTRPPR RRLRRLCSSDSSS* back to topmRNA from alignment at tig00000880_pilon:328830..331421+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra4243.t1 ID=Ggra4243.t1|Name=Ggra4243.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2592bp|location=Sequence derived from alignment at tig00000880_pilon:328830..331421+ (Gracilaria gracilis GNS1m male) ATGCAGCCGCTCACCTCTGACAGCGAAATCGACCTGAACCCTTCGCCGGA
CTATGCTTCGTCCCTCTATCTGCGATGTCCCCGCATACGAATGCTATACC
GCTCGTTGAGAGATGACTCCATCCCTCTAAGACCGCGGTCGCCCCTCGGA
ACAGACTCCTCACTCTCCTCCCCTCCCCCACCAGCAAAGGTGGCCCCGCC
CGACTCGCGTGATGTTCCTAACACCTGTTCTGTTGACGTTGCGCCGCCGT
CGGACGAGCAGCTTGGACTACCGTCTGCCGTCGATGCTGCTATGGACGAC
ATCCCCATCGCGATGAGGCCTCTCGCCACGACGCTTTGGAAGGCGCCGCA
CGTGTCCGTGCTTCAGGGATATACACGCTCACAAGCTGCTACCGCCGTTG
CGTATGCTCTTAACTTGCATAGAGCCGCGGGAGGTGCTCGCGCTGTGTTG
GTCATTGCACGTGTTGCGTCGACGGCCAAAGTATGGCAACAGAAGCTCAG
TGCCAATCTTGACGAGGTGAAGGTCAGAACCTTGCGTAGCGGTGTTTATT
CGACGCGGCGCCCTTGCCTCAATTCTCTGCGTATGGAACAGTCACCTGGC
GTTTGGATTCTAACAGGTAAGGCTTTGAAGGATGACGCTAGTTGGAACGA
TATACGACAGGCGCTCAGGGAAAACCGTGTTACCAATACGTGGGATATGG
TCATCTCAGAGGCTCAGGGAGGTGATTCTACTTTGAATCTTCGTCATTCC
CCGTTTCGAATGGTGGCTGACAAACAGGCTCGCGCGGGTATGTTCGTCAT
GTGTTCGAATGAAGTTCTCCATGTACGCAAGGAACAATTTTCAGAGCACG
CTGTACGCGAGTTTATTCAAACGCAGCTTCCTTCTTCGCCCTATTTGAGC
GACGAATCAGTGTGGATCACCCCTACGTCTATTGGGGGCATTCCTCTGAA
AAGGTCAAATCGTTCAAGGCGCAAGTCCAGTGCGCAAGATCTTGAACAGT
TACGACGAAAGGCAGATGCGCTTGTTTCGAAGATACAGAGAACCCCGCCA
GTATATCAGCAAATTTCCGCGAAGGAAGTTGAAGAAGACGAAGATGTGCA
TATCCCCAATGTTGACCCCGAGCCAAAGCGGATGAACGGGGACAAGAGTG
TGTCTAGGAGGTTCTCTATGTCCATTAATGCGTCACGCACTCGAAAAAGA
ACCTCCACTGTGCGATTGCCGCTGCAGGAGATTAGAACACCAACAAGCAC
CAGACGAGAACCTCGTAAAAGTAGTGCCTCTCGCCCCAGTCGACGAGTGT
CTCCACCGCACGAAGTTACAGCTATGCGATCAAGAGCCCGAACTAGACGA
CGGTCGCCATCTCAAGATATCTCATCTCGTCAAAGTTATGATCGACGCTC
AGTCAGTATTATTGAACTCTCAGATGATGATGAATCAGAAATTGAGTGGC
ATACGCCTCTGAGCCAACTCGTTATTCCCTCTTCATTTTTGGGCAAAGGT
GAAGAGATCAATGACTCGTCAGATGAAGAAGAATGGAAAACTGCGTACGC
CTCTCGCCGAAAGTCGAGGATCAACACGGGCCGCGGTGGAGGGAGTCGAG
CCAAGAGCCGGAACGCTCGACTCTCGAGGGATCATGAACGTCACAGCGGA
GGCCGTCGGGACTCGGAATTAGCGTTGCCCGGTCCCCGGATGAAAAGGCT
TTCATGCGCGCTGGATGCCGGGCTTGAGAGTCCTGATACCTTTCCATCGA
CAAACGTTCTTGATAGTGAAGAAAGCTCTCTAGATATGAATATAGGACCT
GGAAAGCGTGTTTCTGGCGGAAGGAAAGTATTCCGAAGACGAAGGGTTTC
GAACGAAAGGCATTTCGGTAGGAGACTTAGTTCTCGTCGATCGATGAGTT
CTGAGAACTCGCTTTATGCCGAAGAGGAAGCGACTCCTATTAGTTCCCCG
TTTGAATCTGTTCGAAGGCGCAAGAACAGCTCCTCTGCTTCAAGTTGTCT
AAATGGGGTCTTTGACACCCCCACGGTACGAAGAAATATGTCGTTTGTTG
AAATTCTCGATAGTGACATTGAAGTAGTGGATGATCGCGAAGTGATTAAT
TTGATCTCAGATGATGAAGACGAAGGTTTTGTCCGACGCTCTCTAGCTCG
CAACAATGAGTCGGAAATGTCTCATGTTGTTTCCGTGGAACATGCGGATA
TGCATACCGTTCATGTAGAAAGTCAAGATGAGGAGGAGATGAGCTACGGC
TCATCTCTTATTCTAACAGGTGTGACCAAATACAATCCACAACCTGACTC
ATTAACCCAACCTGAGCGACGGAAGTACAACACATGGCTGCGAAGGGCAA
GAAGAGCTGAAGCTCGCGGGCCGGATGGATATGATGCGGCAATCAACCTT
TACATGAAATGTCTCACTTTGTGTGATGAAGATGATCATCTGGCCAGTAG
GATTTTGTCTCTGACTAACGAAACCGGGATTCTATCGTCTAAAGATTTCT
ACGAAGGCCGGAGAACCTCACGAATCTCAAAAAGAACCCGTCCCCCAAGG
CGTCGGCTGAGGCGCCTTTGCAGCAGCGATAGTAGCAGTTAG back to topCoding sequence (CDS) from alignment at tig00000880_pilon:328830..331421+ >Ggra4243.t1 ID=Ggra4243.t1|Name=Ggra4243.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2592bp|location=Sequence derived from alignment at tig00000880_pilon:328830..331421+ (Gracilaria gracilis GNS1m male) ATGCAGCCGCTCACCTCTGACAGCGAAATCGACCTGAACCCTTCGCCGGA CTATGCTTCGTCCCTCTATCTGCGATGTCCCCGCATACGAATGCTATACC GCTCGTTGAGAGATGACTCCATCCCTCTAAGACCGCGGTCGCCCCTCGGA ACAGACTCCTCACTCTCCTCCCCTCCCCCACCAGCAAAGGTGGCCCCGCC CGACTCGCGTGATGTTCCTAACACCTGTTCTGTTGACGTTGCGCCGCCGT CGGACGAGCAGCTTGGACTACCGTCTGCCGTCGATGCTGCTATGGACGAC ATCCCCATCGCGATGAGGCCTCTCGCCACGACGCTTTGGAAGGCGCCGCA CGTGTCCGTGCTTCAGGGATATACACGCTCACAAGCTGCTACCGCCGTTG CGTATGCTCTTAACTTGCATAGAGCCGCGGGAGGTGCTCGCGCTGTGTTG GTCATTGCACGTGTTGCGTCGACGGCCAAAGTATGGCAACAGAAGCTCAG TGCCAATCTTGACGAGGTGAAGGTCAGAACCTTGCGTAGCGGTGTTTATT CGACGCGGCGCCCTTGCCTCAATTCTCTGCGTATGGAACAGTCACCTGGC GTTTGGATTCTAACAGGTAAGGCTTTGAAGGATGACGCTAGTTGGAACGA TATACGACAGGCGCTCAGGGAAAACCGTGTTACCAATACGTGGGATATGG TCATCTCAGAGGCTCAGGGAGGTGATTCTACTTTGAATCTTCGTCATTCC CCGTTTCGAATGGTGGCTGACAAACAGGCTCGCGCGGGTATGTTCGTCAT GTGTTCGAATGAAGTTCTCCATGTACGCAAGGAACAATTTTCAGAGCACG CTGTACGCGAGTTTATTCAAACGCAGCTTCCTTCTTCGCCCTATTTGAGC GACGAATCAGTGTGGATCACCCCTACGTCTATTGGGGGCATTCCTCTGAA AAGGTCAAATCGTTCAAGGCGCAAGTCCAGTGCGCAAGATCTTGAACAGT TACGACGAAAGGCAGATGCGCTTGTTTCGAAGATACAGAGAACCCCGCCA GTATATCAGCAAATTTCCGCGAAGGAAGTTGAAGAAGACGAAGATGTGCA TATCCCCAATGTTGACCCCGAGCCAAAGCGGATGAACGGGGACAAGAGTG TGTCTAGGAGGTTCTCTATGTCCATTAATGCGTCACGCACTCGAAAAAGA ACCTCCACTGTGCGATTGCCGCTGCAGGAGATTAGAACACCAACAAGCAC CAGACGAGAACCTCGTAAAAGTAGTGCCTCTCGCCCCAGTCGACGAGTGT CTCCACCGCACGAAGTTACAGCTATGCGATCAAGAGCCCGAACTAGACGA CGGTCGCCATCTCAAGATATCTCATCTCGTCAAAGTTATGATCGACGCTC AGTCAGTATTATTGAACTCTCAGATGATGATGAATCAGAAATTGAGTGGC ATACGCCTCTGAGCCAACTCGTTATTCCCTCTTCATTTTTGGGCAAAGGT GAAGAGATCAATGACTCGTCAGATGAAGAAGAATGGAAAACTGCGTACGC CTCTCGCCGAAAGTCGAGGATCAACACGGGCCGCGGTGGAGGGAGTCGAG CCAAGAGCCGGAACGCTCGACTCTCGAGGGATCATGAACGTCACAGCGGA GGCCGTCGGGACTCGGAATTAGCGTTGCCCGGTCCCCGGATGAAAAGGCT TTCATGCGCGCTGGATGCCGGGCTTGAGAGTCCTGATACCTTTCCATCGA CAAACGTTCTTGATAGTGAAGAAAGCTCTCTAGATATGAATATAGGACCT GGAAAGCGTGTTTCTGGCGGAAGGAAAGTATTCCGAAGACGAAGGGTTTC GAACGAAAGGCATTTCGGTAGGAGACTTAGTTCTCGTCGATCGATGAGTT CTGAGAACTCGCTTTATGCCGAAGAGGAAGCGACTCCTATTAGTTCCCCG TTTGAATCTGTTCGAAGGCGCAAGAACAGCTCCTCTGCTTCAAGTTGTCT AAATGGGGTCTTTGACACCCCCACGGTACGAAGAAATATGTCGTTTGTTG AAATTCTCGATAGTGACATTGAAGTAGTGGATGATCGCGAAGTGATTAAT TTGATCTCAGATGATGAAGACGAAGGTTTTGTCCGACGCTCTCTAGCTCG CAACAATGAGTCGGAAATGTCTCATGTTGTTTCCGTGGAACATGCGGATA TGCATACCGTTCATGTAGAAAGTCAAGATGAGGAGGAGATGAGCTACGGC TCATCTCTTATTCTAACAGGTGTGACCAAATACAATCCACAACCTGACTC ATTAACCCAACCTGAGCGACGGAAGTACAACACATGGCTGCGAAGGGCAA GAAGAGCTGAAGCTCGCGGGCCGGATGGATATGATGCGGCAATCAACCTT TACATGAAATGTCTCACTTTGTGTGATGAAGATGATCATCTGGCCAGTAG GATTTTGTCTCTGACTAACGAAACCGGGATTCTATCGTCTAAAGATTTCT ACGAAGGCCGGAGAACCTCACGAATCTCAAAAAGAACCCGTCCCCCAAGG CGTCGGCTGAGGCGCCTTTGCAGCAGCGATAGTAGCAGTTAG back to top
|