Ggra4228.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4228.t1
Unique NameGgra4228.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length164
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:302665..303156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4228Ggra4228Gracilaria gracilis GNS1m malegenetig00000880_pilon 302665..303156 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4228.t1.stop1Ggra4228.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000880_pilon 302665..302667 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4228.t1.CDS1Ggra4228.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000880_pilon 302665..303156 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4228.t1.exon1Ggra4228.t1.exon1Gracilaria gracilis GNS1m maleexontig00000880_pilon 302665..303156 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4228.t1.start1Ggra4228.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000880_pilon 303154..303156 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4228.t1Ggra4228.t1Gracilaria gracilis GNS1m malepolypeptidetig00000880_pilon 302665..303156 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4228.t1 ID=Ggra4228.t1|Name=Ggra4228.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=164bp
MAPPSRSDAGVCGAKFRAMLRCVESSGSSAACADKVGDFLACERAVLRAA
AQHAVVSPSTPTAPPPSSPRASAADAPPSAAQKPFLVSSASLMSRMLVKQ
YDACASLVRTAARPHCVRDSQRFATRMLADFSLSVSAVSSRVSSSLSNLW
RSLGADDSSPKPR*
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spliced messenger RNA

>Ggra4228.t1 ID=Ggra4228.t1|Name=Ggra4228.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=492bp|location=Sequence derived from alignment at tig00000880_pilon:302665..303156- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCCGCCGTCGCGGTCGGACGCGGGCGTGTGCGGCGCCAAGTTCCG
CGCCATGCTACGCTGCGTGGAGAGCAGCGGCTCTTCCGCCGCGTGCGCCG
ACAAGGTGGGAGACTTCCTCGCCTGCGAGCGCGCCGTGCTTCGCGCCGCT
GCGCAACACGCCGTCGTGTCTCCGTCGACGCCCACTGCGCCGCCGCCTTC
TTCCCCCCGCGCGTCCGCGGCTGACGCGCCGCCTTCCGCCGCTCAGAAGC
CGTTTTTGGTTTCTTCCGCTTCGCTCATGTCTCGTATGCTCGTCAAGCAG
TACGACGCCTGTGCGTCGCTGGTGCGCACTGCTGCTCGCCCGCATTGCGT
GCGCGATTCGCAGCGCTTTGCTACGCGCATGTTAGCCGACTTCTCACTTA
GTGTTAGTGCAGTGTCGTCTCGCGTGTCTTCTTCGCTTTCCAACTTGTGG
CGCTCCTTAGGCGCCGATGACTCGTCGCCAAAGCCTCGCTAG
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protein sequence of Ggra4228.t1

>Ggra4228.t1 ID=Ggra4228.t1|Name=Ggra4228.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=164bp
MAPPSRSDAGVCGAKFRAMLRCVESSGSSAACADKVGDFLACERAVLRAA
AQHAVVSPSTPTAPPPSSPRASAADAPPSAAQKPFLVSSASLMSRMLVKQ
YDACASLVRTAARPHCVRDSQRFATRMLADFSLSVSAVSSRVSSSLSNLW
RSLGADDSSPKPR*
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mRNA from alignment at tig00000880_pilon:302665..303156-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4228.t1 ID=Ggra4228.t1|Name=Ggra4228.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=492bp|location=Sequence derived from alignment at tig00000880_pilon:302665..303156- (Gracilaria gracilis GNS1m male)
ATGGCTCCGCCGTCGCGGTCGGACGCGGGCGTGTGCGGCGCCAAGTTCCG
CGCCATGCTACGCTGCGTGGAGAGCAGCGGCTCTTCCGCCGCGTGCGCCG
ACAAGGTGGGAGACTTCCTCGCCTGCGAGCGCGCCGTGCTTCGCGCCGCT
GCGCAACACGCCGTCGTGTCTCCGTCGACGCCCACTGCGCCGCCGCCTTC
TTCCCCCCGCGCGTCCGCGGCTGACGCGCCGCCTTCCGCCGCTCAGAAGC
CGTTTTTGGTTTCTTCCGCTTCGCTCATGTCTCGTATGCTCGTCAAGCAG
TACGACGCCTGTGCGTCGCTGGTGCGCACTGCTGCTCGCCCGCATTGCGT
GCGCGATTCGCAGCGCTTTGCTACGCGCATGTTAGCCGACTTCTCACTTA
GTGTTAGTGCAGTGTCGTCTCGCGTGTCTTCTTCGCTTTCCAACTTGTGG
CGCTCCTTAGGCGCCGATGACTCGTCGCCAAAGCCTCGCTAG
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Coding sequence (CDS) from alignment at tig00000880_pilon:302665..303156-

>Ggra4228.t1 ID=Ggra4228.t1|Name=Ggra4228.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=492bp|location=Sequence derived from alignment at tig00000880_pilon:302665..303156- (Gracilaria gracilis GNS1m male)
ATGGCTCCGCCGTCGCGGTCGGACGCGGGCGTGTGCGGCGCCAAGTTCCG
CGCCATGCTACGCTGCGTGGAGAGCAGCGGCTCTTCCGCCGCGTGCGCCG
ACAAGGTGGGAGACTTCCTCGCCTGCGAGCGCGCCGTGCTTCGCGCCGCT
GCGCAACACGCCGTCGTGTCTCCGTCGACGCCCACTGCGCCGCCGCCTTC
TTCCCCCCGCGCGTCCGCGGCTGACGCGCCGCCTTCCGCCGCTCAGAAGC
CGTTTTTGGTTTCTTCCGCTTCGCTCATGTCTCGTATGCTCGTCAAGCAG
TACGACGCCTGTGCGTCGCTGGTGCGCACTGCTGCTCGCCCGCATTGCGT
GCGCGATTCGCAGCGCTTTGCTACGCGCATGTTAGCCGACTTCTCACTTA
GTGTTAGTGCAGTGTCGTCTCGCGTGTCTTCTTCGCTTTCCAACTTGTGG
CGCTCCTTAGGCGCCGATGACTCGTCGCCAAAGCCTCGCTAG
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