Ggra4204.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4204.t1
Unique NameGgra4204.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:68965..69756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4204Ggra4204Gracilaria gracilis GNS1m malegenetig00000880_pilon 68965..69756 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4204.t1.stop1Ggra4204.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000880_pilon 68965..68967 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4204.t1.CDS1Ggra4204.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000880_pilon 68965..69756 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4204.t1.exon1Ggra4204.t1.exon1Gracilaria gracilis GNS1m maleexontig00000880_pilon 68965..69756 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4204.t1.start1Ggra4204.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000880_pilon 69754..69756 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4204.t1Ggra4204.t1Gracilaria gracilis GNS1m malepolypeptidetig00000880_pilon 68965..69756 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4204.t1 ID=Ggra4204.t1|Name=Ggra4204.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=264bp
MAPPPPPRRPPYGAPVGGPPLTSYPYPYSAPYGAPPPMPYGAPPQPGPPM
PPYGAMPSAPPAGRYSAPPGGYSAPPGYGAPPGPPVGYGGSAPPPPMPGG
APMPGGAGVPAGYPGSAHANQGGEAPYAPSLSSSHSSSSGRPHGGYGGAP
PPPPPGGAAPMHAAPYGAMQPQRPSMPQSHAGAPGGYGGPAPPPPNGQPG
YMGTPPPAPVPGQHKPENTGLTGALKEKLKDLKDLKDPKALIEENANKFL
SSSAAKKILGDRF*
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spliced messenger RNA

>Ggra4204.t1 ID=Ggra4204.t1|Name=Ggra4204.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=792bp|location=Sequence derived from alignment at tig00000880_pilon:68965..69756- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCCCACCCCCACCGCCGCGCCGCCCGCCGTACGGCGCGCCGGTCGG
CGGCCCGCCGCTCACCTCGTACCCCTACCCCTACAGCGCCCCATACGGCG
CGCCGCCGCCCATGCCGTACGGCGCGCCGCCACAGCCCGGTCCCCCCATG
CCACCGTACGGCGCCATGCCCTCAGCTCCGCCCGCCGGCAGGTACTCCGC
GCCTCCCGGTGGCTACTCTGCACCCCCCGGCTATGGAGCGCCTCCCGGCC
CTCCTGTGGGCTACGGCGGTTCCGCACCGCCGCCGCCAATGCCCGGCGGC
GCCCCGATGCCCGGCGGCGCAGGCGTTCCTGCCGGCTACCCCGGATCGGC
GCACGCCAACCAAGGCGGCGAAGCTCCGTATGCTCCGTCGCTGTCGAGCT
CACATTCGTCAAGTTCCGGCCGTCCGCACGGAGGCTATGGCGGAGCGCCG
CCGCCGCCACCGCCGGGTGGTGCTGCGCCCATGCATGCTGCCCCTTATGG
TGCCATGCAGCCGCAACGACCTTCCATGCCGCAGTCGCATGCCGGTGCGC
CTGGCGGGTACGGCGGACCGGCGCCGCCGCCGCCGAATGGACAACCGGGA
TATATGGGCACTCCACCTCCGGCGCCTGTGCCGGGCCAACACAAGCCTGA
GAATACTGGCCTTACCGGTGCGCTCAAGGAGAAGCTCAAGGATCTCAAGG
ATCTCAAGGATCCAAAGGCTTTGATCGAAGAGAACGCCAACAAGTTTTTG
TCGAGCAGTGCAGCAAAGAAGATTCTTGGTGACAGGTTCTGA
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protein sequence of Ggra4204.t1

>Ggra4204.t1 ID=Ggra4204.t1|Name=Ggra4204.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MAPPPPPRRPPYGAPVGGPPLTSYPYPYSAPYGAPPPMPYGAPPQPGPPM
PPYGAMPSAPPAGRYSAPPGGYSAPPGYGAPPGPPVGYGGSAPPPPMPGG
APMPGGAGVPAGYPGSAHANQGGEAPYAPSLSSSHSSSSGRPHGGYGGAP
PPPPPGGAAPMHAAPYGAMQPQRPSMPQSHAGAPGGYGGPAPPPPNGQPG
YMGTPPPAPVPGQHKPENTGLTGALKEKLKDLKDLKDPKALIEENANKFL
SSSAAKKILGDRF*
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mRNA from alignment at tig00000880_pilon:68965..69756-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4204.t1 ID=Ggra4204.t1|Name=Ggra4204.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=792bp|location=Sequence derived from alignment at tig00000880_pilon:68965..69756- (Gracilaria gracilis GNS1m male)
ATGGCCCCACCCCCACCGCCGCGCCGCCCGCCGTACGGCGCGCCGGTCGG
CGGCCCGCCGCTCACCTCGTACCCCTACCCCTACAGCGCCCCATACGGCG
CGCCGCCGCCCATGCCGTACGGCGCGCCGCCACAGCCCGGTCCCCCCATG
CCACCGTACGGCGCCATGCCCTCAGCTCCGCCCGCCGGCAGGTACTCCGC
GCCTCCCGGTGGCTACTCTGCACCCCCCGGCTATGGAGCGCCTCCCGGCC
CTCCTGTGGGCTACGGCGGTTCCGCACCGCCGCCGCCAATGCCCGGCGGC
GCCCCGATGCCCGGCGGCGCAGGCGTTCCTGCCGGCTACCCCGGATCGGC
GCACGCCAACCAAGGCGGCGAAGCTCCGTATGCTCCGTCGCTGTCGAGCT
CACATTCGTCAAGTTCCGGCCGTCCGCACGGAGGCTATGGCGGAGCGCCG
CCGCCGCCACCGCCGGGTGGTGCTGCGCCCATGCATGCTGCCCCTTATGG
TGCCATGCAGCCGCAACGACCTTCCATGCCGCAGTCGCATGCCGGTGCGC
CTGGCGGGTACGGCGGACCGGCGCCGCCGCCGCCGAATGGACAACCGGGA
TATATGGGCACTCCACCTCCGGCGCCTGTGCCGGGCCAACACAAGCCTGA
GAATACTGGCCTTACCGGTGCGCTCAAGGAGAAGCTCAAGGATCTCAAGG
ATCTCAAGGATCCAAAGGCTTTGATCGAAGAGAACGCCAACAAGTTTTTG
TCGAGCAGTGCAGCAAAGAAGATTCTTGGTGACAGGTTCTGA
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Coding sequence (CDS) from alignment at tig00000880_pilon:68965..69756-

>Ggra4204.t1 ID=Ggra4204.t1|Name=Ggra4204.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=792bp|location=Sequence derived from alignment at tig00000880_pilon:68965..69756- (Gracilaria gracilis GNS1m male)
ATGGCCCCACCCCCACCGCCGCGCCGCCCGCCGTACGGCGCGCCGGTCGG
CGGCCCGCCGCTCACCTCGTACCCCTACCCCTACAGCGCCCCATACGGCG
CGCCGCCGCCCATGCCGTACGGCGCGCCGCCACAGCCCGGTCCCCCCATG
CCACCGTACGGCGCCATGCCCTCAGCTCCGCCCGCCGGCAGGTACTCCGC
GCCTCCCGGTGGCTACTCTGCACCCCCCGGCTATGGAGCGCCTCCCGGCC
CTCCTGTGGGCTACGGCGGTTCCGCACCGCCGCCGCCAATGCCCGGCGGC
GCCCCGATGCCCGGCGGCGCAGGCGTTCCTGCCGGCTACCCCGGATCGGC
GCACGCCAACCAAGGCGGCGAAGCTCCGTATGCTCCGTCGCTGTCGAGCT
CACATTCGTCAAGTTCCGGCCGTCCGCACGGAGGCTATGGCGGAGCGCCG
CCGCCGCCACCGCCGGGTGGTGCTGCGCCCATGCATGCTGCCCCTTATGG
TGCCATGCAGCCGCAACGACCTTCCATGCCGCAGTCGCATGCCGGTGCGC
CTGGCGGGTACGGCGGACCGGCGCCGCCGCCGCCGAATGGACAACCGGGA
TATATGGGCACTCCACCTCCGGCGCCTGTGCCGGGCCAACACAAGCCTGA
GAATACTGGCCTTACCGGTGCGCTCAAGGAGAAGCTCAAGGATCTCAAGG
ATCTCAAGGATCCAAAGGCTTTGATCGAAGAGAACGCCAACAAGTTTTTG
TCGAGCAGTGCAGCAAAGAAGATTCTTGGTGACAGGTTCTGA
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