Ggra4192.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4192.t1
Unique NameGgra4192.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length287
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:27355..28215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4192Ggra4192Gracilaria gracilis GNS1m malegenetig00000880_pilon 27355..28215 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4192.t1.CDS1Ggra4192.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000880_pilon 27355..28215 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4192.t1.exon1Ggra4192.t1.exon1Gracilaria gracilis GNS1m maleexontig00000880_pilon 27355..28215 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4192.t1.start1Ggra4192.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000880_pilon 28213..28215 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4192.t1Ggra4192.t1Gracilaria gracilis GNS1m malepolypeptidetig00000880_pilon 27355..28215 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4192.t1 ID=Ggra4192.t1|Name=Ggra4192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=287bp
MLDVSLRSTVTNKEKRLQLKQRISVDVNPIRIANRSTSGVDVDSNPWLKT
AERIEANEEEEQNVNDSHASVKKEHVPAAVRKASKAEKSKKNGKEPKTSN
SGEASPTAATQSGTSVEIASNPWLESGDKEEVADAKSKDLRDIVEKGDAR
DADGTASKKKKKNDKNKRGKRVELKQTSSEGAKRVADANRTEIRVAALDN
PWLQPGAGKQKSSKSKKAKRKRTKEADELAASKRARTEEDEEDTMARMRQ
EAAAFAGAGGAEEEDFEAAKREEVEAAMPDAKDIQAE
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spliced messenger RNA

>Ggra4192.t1 ID=Ggra4192.t1|Name=Ggra4192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=861bp|location=Sequence derived from alignment at tig00000880_pilon:27355..28215- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGATGTCAGTCTCAGATCTACTGTGACGAACAAGGAGAAGCGATT
GCAACTGAAGCAAAGGATTTCTGTGGACGTGAACCCGATACGCATTGCGA
ACCGGTCGACGAGCGGCGTGGACGTCGACAGCAACCCATGGTTGAAAACT
GCGGAAAGGATAGAAGCAAACGAAGAGGAGGAGCAGAATGTCAACGATTC
GCACGCTAGCGTTAAGAAAGAACATGTGCCCGCTGCAGTAAGAAAGGCTT
CGAAGGCGGAAAAGTCTAAGAAGAATGGCAAGGAGCCCAAGACGAGCAAC
TCAGGAGAGGCATCGCCAACGGCTGCAACGCAATCTGGCACTAGTGTGGA
GATTGCGAGCAATCCGTGGCTGGAATCTGGAGACAAGGAGGAGGTGGCTG
ATGCTAAAAGCAAGGATCTGCGGGACATCGTAGAGAAAGGAGATGCGCGC
GATGCTGATGGCACAGCTTCCAAGAAGAAGAAGAAGAACGACAAGAACAA
GAGGGGAAAGCGAGTAGAACTGAAACAAACCAGTTCTGAGGGAGCGAAAC
GTGTGGCGGATGCGAATCGTACCGAAATCAGAGTGGCTGCTCTGGACAAT
CCGTGGCTGCAACCGGGAGCGGGGAAGCAAAAGAGCTCCAAATCGAAGAA
GGCAAAGCGGAAGCGCACAAAGGAAGCCGACGAATTGGCTGCTAGTAAGC
GAGCGCGCACTGAGGAGGATGAAGAAGACACGATGGCACGCATGCGACAG
GAGGCGGCGGCATTCGCCGGCGCGGGTGGTGCGGAAGAAGAGGACTTTGA
AGCGGCGAAGCGTGAGGAGGTGGAAGCTGCTATGCCGGACGCAAAGGATA
TACAAGCAGAG
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protein sequence of Ggra4192.t1

>Ggra4192.t1 ID=Ggra4192.t1|Name=Ggra4192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=287bp
MLDVSLRSTVTNKEKRLQLKQRISVDVNPIRIANRSTSGVDVDSNPWLKT
AERIEANEEEEQNVNDSHASVKKEHVPAAVRKASKAEKSKKNGKEPKTSN
SGEASPTAATQSGTSVEIASNPWLESGDKEEVADAKSKDLRDIVEKGDAR
DADGTASKKKKKNDKNKRGKRVELKQTSSEGAKRVADANRTEIRVAALDN
PWLQPGAGKQKSSKSKKAKRKRTKEADELAASKRARTEEDEEDTMARMRQ
EAAAFAGAGGAEEEDFEAAKREEVEAAMPDAKDIQAE
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mRNA from alignment at tig00000880_pilon:27355..28215-

Legend: CDSpolypeptideexonstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4192.t1 ID=Ggra4192.t1|Name=Ggra4192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=861bp|location=Sequence derived from alignment at tig00000880_pilon:27355..28215- (Gracilaria gracilis GNS1m male)
ATGCTGGATGTCAGTCTCAGATCTACTGTGACGAACAAGGAGAAGCGATT
GCAACTGAAGCAAAGGATTTCTGTGGACGTGAACCCGATACGCATTGCGA
ACCGGTCGACGAGCGGCGTGGACGTCGACAGCAACCCATGGTTGAAAACT
GCGGAAAGGATAGAAGCAAACGAAGAGGAGGAGCAGAATGTCAACGATTC
GCACGCTAGCGTTAAGAAAGAACATGTGCCCGCTGCAGTAAGAAAGGCTT
CGAAGGCGGAAAAGTCTAAGAAGAATGGCAAGGAGCCCAAGACGAGCAAC
TCAGGAGAGGCATCGCCAACGGCTGCAACGCAATCTGGCACTAGTGTGGA
GATTGCGAGCAATCCGTGGCTGGAATCTGGAGACAAGGAGGAGGTGGCTG
ATGCTAAAAGCAAGGATCTGCGGGACATCGTAGAGAAAGGAGATGCGCGC
GATGCTGATGGCACAGCTTCCAAGAAGAAGAAGAAGAACGACAAGAACAA
GAGGGGAAAGCGAGTAGAACTGAAACAAACCAGTTCTGAGGGAGCGAAAC
GTGTGGCGGATGCGAATCGTACCGAAATCAGAGTGGCTGCTCTGGACAAT
CCGTGGCTGCAACCGGGAGCGGGGAAGCAAAAGAGCTCCAAATCGAAGAA
GGCAAAGCGGAAGCGCACAAAGGAAGCCGACGAATTGGCTGCTAGTAAGC
GAGCGCGCACTGAGGAGGATGAAGAAGACACGATGGCACGCATGCGACAG
GAGGCGGCGGCATTCGCCGGCGCGGGTGGTGCGGAAGAAGAGGACTTTGA
AGCGGCGAAGCGTGAGGAGGTGGAAGCTGCTATGCCGGACGCAAAGGATA
TACAAGCAGAG
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Coding sequence (CDS) from alignment at tig00000880_pilon:27355..28215-

>Ggra4192.t1 ID=Ggra4192.t1|Name=Ggra4192.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=861bp|location=Sequence derived from alignment at tig00000880_pilon:27355..28215- (Gracilaria gracilis GNS1m male)
ATGCTGGATGTCAGTCTCAGATCTACTGTGACGAACAAGGAGAAGCGATT
GCAACTGAAGCAAAGGATTTCTGTGGACGTGAACCCGATACGCATTGCGA
ACCGGTCGACGAGCGGCGTGGACGTCGACAGCAACCCATGGTTGAAAACT
GCGGAAAGGATAGAAGCAAACGAAGAGGAGGAGCAGAATGTCAACGATTC
GCACGCTAGCGTTAAGAAAGAACATGTGCCCGCTGCAGTAAGAAAGGCTT
CGAAGGCGGAAAAGTCTAAGAAGAATGGCAAGGAGCCCAAGACGAGCAAC
TCAGGAGAGGCATCGCCAACGGCTGCAACGCAATCTGGCACTAGTGTGGA
GATTGCGAGCAATCCGTGGCTGGAATCTGGAGACAAGGAGGAGGTGGCTG
ATGCTAAAAGCAAGGATCTGCGGGACATCGTAGAGAAAGGAGATGCGCGC
GATGCTGATGGCACAGCTTCCAAGAAGAAGAAGAAGAACGACAAGAACAA
GAGGGGAAAGCGAGTAGAACTGAAACAAACCAGTTCTGAGGGAGCGAAAC
GTGTGGCGGATGCGAATCGTACCGAAATCAGAGTGGCTGCTCTGGACAAT
CCGTGGCTGCAACCGGGAGCGGGGAAGCAAAAGAGCTCCAAATCGAAGAA
GGCAAAGCGGAAGCGCACAAAGGAAGCCGACGAATTGGCTGCTAGTAAGC
GAGCGCGCACTGAGGAGGATGAAGAAGACACGATGGCACGCATGCGACAG
GAGGCGGCGGCATTCGCCGGCGCGGGTGGTGCGGAAGAAGAGGACTTTGA
AGCGGCGAAGCGTGAGGAGGTGGAAGCTGCTATGCCGGACGCAAAGGATA
TACAAGCAGAG
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