Ggra4172.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4172.t1
Unique NameGgra4172.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:493408..493785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4172Ggra4172Gracilaria gracilis GNS1m malegenetig00000853_pilon 493408..493785 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4172.t1.stop1Ggra4172.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000853_pilon 493408..493410 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4172.t1.CDS1Ggra4172.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000853_pilon 493408..493785 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4172.t1.exon1Ggra4172.t1.exon1Gracilaria gracilis GNS1m maleexontig00000853_pilon 493408..493785 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4172.t1.start1Ggra4172.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000853_pilon 493783..493785 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4172.t1Ggra4172.t1Gracilaria gracilis GNS1m malepolypeptidetig00000853_pilon 493408..493785 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4172.t1 ID=Ggra4172.t1|Name=Ggra4172.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=126bp
MRQETYQWYKEDIIQVSQTCVILHNILVRMNQNGEFGEDEAEERAVLDIV
QEMYQLEEDYANTALDEQKKHMMHFEGGNNSSSRDWEGLEINERYMETAT
AFRSLQIDLIGSVNASRNIGFSTGL*
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spliced messenger RNA

>Ggra4172.t1 ID=Ggra4172.t1|Name=Ggra4172.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=378bp|location=Sequence derived from alignment at tig00000853_pilon:493408..493785- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCAAGAGACCTATCAGTGGTACAAAGAAGATATAATTCAGGTGAG
TCAAACTTGTGTAATACTGCACAATATTCTGGTTCGTATGAACCAGAATG
GAGAATTTGGGGAGGACGAAGCAGAAGAAAGGGCTGTGCTGGACATTGTC
CAAGAAATGTATCAGCTGGAAGAGGATTATGCAAATACGGCGCTTGATGA
ACAAAAAAAGCATATGATGCATTTTGAAGGAGGGAACAATAGCAGTTCAA
GGGACTGGGAAGGCCTCGAGATCAACGAACGCTACATGGAGACTGCTACC
GCATTTAGATCACTACAGATAGACTTGATTGGGAGCGTGAATGCTTCAAG
GAATATTGGTTTCAGTACGGGACTGTGA
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protein sequence of Ggra4172.t1

>Ggra4172.t1 ID=Ggra4172.t1|Name=Ggra4172.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MRQETYQWYKEDIIQVSQTCVILHNILVRMNQNGEFGEDEAEERAVLDIV
QEMYQLEEDYANTALDEQKKHMMHFEGGNNSSSRDWEGLEINERYMETAT
AFRSLQIDLIGSVNASRNIGFSTGL*
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mRNA from alignment at tig00000853_pilon:493408..493785-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4172.t1 ID=Ggra4172.t1|Name=Ggra4172.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=378bp|location=Sequence derived from alignment at tig00000853_pilon:493408..493785- (Gracilaria gracilis GNS1m male)
ATGAGGCAAGAGACCTATCAGTGGTACAAAGAAGATATAATTCAGGTGAG
TCAAACTTGTGTAATACTGCACAATATTCTGGTTCGTATGAACCAGAATG
GAGAATTTGGGGAGGACGAAGCAGAAGAAAGGGCTGTGCTGGACATTGTC
CAAGAAATGTATCAGCTGGAAGAGGATTATGCAAATACGGCGCTTGATGA
ACAAAAAAAGCATATGATGCATTTTGAAGGAGGGAACAATAGCAGTTCAA
GGGACTGGGAAGGCCTCGAGATCAACGAACGCTACATGGAGACTGCTACC
GCATTTAGATCACTACAGATAGACTTGATTGGGAGCGTGAATGCTTCAAG
GAATATTGGTTTCAGTACGGGACTGTGA
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Coding sequence (CDS) from alignment at tig00000853_pilon:493408..493785-

>Ggra4172.t1 ID=Ggra4172.t1|Name=Ggra4172.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=378bp|location=Sequence derived from alignment at tig00000853_pilon:493408..493785- (Gracilaria gracilis GNS1m male)
ATGAGGCAAGAGACCTATCAGTGGTACAAAGAAGATATAATTCAGGTGAG
TCAAACTTGTGTAATACTGCACAATATTCTGGTTCGTATGAACCAGAATG
GAGAATTTGGGGAGGACGAAGCAGAAGAAAGGGCTGTGCTGGACATTGTC
CAAGAAATGTATCAGCTGGAAGAGGATTATGCAAATACGGCGCTTGATGA
ACAAAAAAAGCATATGATGCATTTTGAAGGAGGGAACAATAGCAGTTCAA
GGGACTGGGAAGGCCTCGAGATCAACGAACGCTACATGGAGACTGCTACC
GCATTTAGATCACTACAGATAGACTTGATTGGGAGCGTGAATGCTTCAAG
GAATATTGGTTTCAGTACGGGACTGTGA
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