Ggra4151.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4151.t1
Unique NameGgra4151.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length606
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:398907..400955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog1132836.RCCGE510_10594
Preferred namedhaK
PFAMsDak1,Dak2
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00002,RC00017
KEGG koko:K00863
KEGG ReactionR01011,R01059
KEGG Pathwayko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622
KEGG ModuleM00344
Evalue7.69e-83
EggNOG OGsCOG2376@1|root,COG2376@2|Bacteria,1MVSR@1224|Proteobacteria,2TTK3@28211|Alphaproteobacteria,4BAQ1@82115|Rhizobiaceae
EC2.7.1.28,2.7.1.29,4.6.1.15
DescriptionDihydroxyacetone kinase
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4151Ggra4151Gracilaria gracilis GNS1m malegenetig00000853_pilon 398907..400955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1Ggra4151.t1Gracilaria gracilis GNS1m malepolypeptidetig00000853_pilon 398907..400955 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1.stop1Ggra4151.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000853_pilon 398907..398909 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1.CDS1Ggra4151.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000853_pilon 398907..399412 -
Ggra4151.t1.CDS2Ggra4151.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000853_pilon 399539..400195 -
Ggra4151.t1.CDS3Ggra4151.t1.CDS3Gracilaria gracilis GNS1m maleCDStig00000853_pilon 400301..400955 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1.exon1Ggra4151.t1.exon1Gracilaria gracilis GNS1m maleexontig00000853_pilon 398907..399412 -
Ggra4151.t1.exon2Ggra4151.t1.exon2Gracilaria gracilis GNS1m maleexontig00000853_pilon 399539..400195 -
Ggra4151.t1.exon3Ggra4151.t1.exon3Gracilaria gracilis GNS1m maleexontig00000853_pilon 400301..400955 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1.intron1Ggra4151.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000853_pilon 399413..399538 -
Ggra4151.t1.intron2Ggra4151.t1.intron2Gracilaria gracilis GNS1m maleintrontig00000853_pilon 400196..400300 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4151.t1.start1Ggra4151.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000853_pilon 400953..400955 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4151.t1 ID=Ggra4151.t1|Name=Ggra4151.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp
MAKRFINGRDTVVRDLMGGLALNSSLVTLLNPDEGGHNVAIRASLTDGSY
TPRVSVVSGGGSGHEPMAAGYVGEGMLTAAVAGEIFASPSASAVSAMLRA
IVPKSTGILVVVMNYQGDKLNFGEAIQELKQSHPDFPVKMILTQDDVALP
HQADKRGIAGTIFVLKIAGAAADQGRSLDEVAVIAETAAASMVSYGVALE
PCTIPGHEIDRNRLKINEMELGMGIHGEPGAERQNLQLENTTQFTRNLVY
EICGRLDVALREKQELVTTCRALAIMVNNLGAVPQSEMLIITQAVADYLY
GGGGQIINGNVHPVHVFSGSFMTSLQMNGVSITCLVLSQKNEIVEQLLHA
PTVCESWSKGFKLRPPSERPTFSNVSVASKTEISEEHSTKASGDGLGSGL
NLQTDNYIAVITDSLLEKCDELGALDRLTGDGDLGDTVRKACERIKADLI
TGRYANAAGNPHILFNSIAGSAGASGGSMGIFARIFLQEMAAYYQKNMGE
GTIPSWRDAFVKGTNAVMRHGGANVGDRTLVDALKPAADVLATPNSTLVQ
AAQAANVGSDSTKHMTRAKYGRSRNVDSRMLLNHADPGSVLVSTVMDAIA
KACRI*
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spliced messenger RNA

>Ggra4151.t1 ID=Ggra4151.t1|Name=Ggra4151.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1818bp|location=Sequence derived from alignment at tig00000853_pilon:398907..400955- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAAACGCTTCATTAACGGCCGTGATACCGTAGTTCGAGATCTAAT
GGGAGGCTTAGCTCTCAATTCATCACTTGTAACCCTTCTCAATCCTGATG
AGGGAGGACATAATGTTGCAATTCGAGCATCTCTCACGGATGGTTCTTAT
ACACCAAGGGTATCAGTAGTAAGCGGCGGAGGAAGTGGGCATGAGCCTAT
GGCTGCGGGCTACGTGGGTGAAGGTATGCTGACGGCAGCTGTGGCAGGAG
AAATTTTCGCATCACCCTCGGCATCGGCTGTTTCGGCAATGCTCAGAGCA
ATTGTCCCGAAATCAACAGGAATCCTAGTTGTTGTGATGAATTATCAAGG
CGACAAGCTCAACTTTGGTGAAGCCATTCAAGAACTGAAACAATCTCATC
CTGACTTTCCAGTGAAAATGATTCTTACACAGGACGACGTGGCCTTACCT
CATCAAGCAGATAAACGAGGAATTGCTGGGACGATATTTGTTCTTAAGAT
AGCAGGGGCAGCTGCTGACCAAGGAAGGTCGCTAGATGAAGTCGCGGTGA
TTGCTGAAACCGCAGCAGCTTCTATGGTAAGCTATGGTGTTGCTCTGGAA
CCCTGTACGATTCCCGGGCATGAAATTGACAGAAACAGATTGAAGATCAA
TGAAATGGAACTGGGCATGGGTATTCACGGGGAACCCGGTGCAGAAAGAC
AGAATCTGCAACTAGAGAACACGACTCAATTTACAAGAAATCTAGTGTAT
GAGATATGCGGAAGGCTCGACGTTGCCCTACGCGAGAAACAAGAACTCGT
TACCACATGCAGGGCGCTGGCCATAATGGTGAACAATCTGGGTGCAGTTC
CACAAAGTGAGATGCTCATTATAACCCAGGCGGTTGCCGACTATCTCTAT
GGTGGGGGTGGTCAAATAATCAACGGCAATGTGCATCCAGTGCACGTTTT
CAGCGGATCGTTCATGACATCACTACAAATGAATGGGGTATCCATAACTT
GTCTCGTTCTTTCTCAGAAAAACGAGATTGTGGAACAACTGCTCCATGCC
CCTACTGTGTGTGAATCGTGGTCTAAGGGATTCAAGCTTCGACCGCCTTC
TGAGAGGCCTACGTTTTCCAATGTCAGCGTTGCTTCTAAAACGGAGATTT
CAGAAGAGCATAGCACCAAGGCCTCTGGGGACGGCTTGGGCTCTGGCTTG
AACTTGCAAACGGATAACTACATAGCAGTAATTACGGATTCTTTACTTGA
AAAGTGCGATGAGCTTGGAGCCTTGGATCGCCTTACCGGAGATGGTGATC
TAGGAGATACAGTGCGTAAGGCCTGCGAGAGGATCAAGGCAGATTTGATA
ACTGGAAGATATGCTAATGCAGCTGGAAACCCACATATCTTGTTCAATAG
TATAGCAGGTTCAGCCGGAGCTTCAGGGGGGTCCATGGGTATTTTCGCTC
GTATATTTCTTCAGGAAATGGCTGCTTACTATCAGAAAAACATGGGAGAA
GGTACCATCCCTTCTTGGCGGGATGCTTTTGTTAAGGGAACGAATGCAGT
GATGCGACATGGTGGAGCAAATGTAGGTGACAGAACTCTTGTAGACGCTC
TGAAACCGGCTGCGGATGTTTTGGCGACGCCCAACAGTACTCTGGTTCAA
GCTGCCCAGGCAGCCAATGTCGGGAGTGATTCCACCAAGCACATGACGAG
AGCCAAATACGGCCGAAGCAGAAATGTTGATTCACGCATGTTACTTAACC
ACGCTGATCCTGGGTCTGTTCTCGTTTCTACCGTTATGGATGCCATCGCC
AAAGCTTGTCGCATTTAA
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protein sequence of Ggra4151.t1

>Ggra4151.t1 ID=Ggra4151.t1|Name=Ggra4151.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=606bp
MAKRFINGRDTVVRDLMGGLALNSSLVTLLNPDEGGHNVAIRASLTDGSY
TPRVSVVSGGGSGHEPMAAGYVGEGMLTAAVAGEIFASPSASAVSAMLRA
IVPKSTGILVVVMNYQGDKLNFGEAIQELKQSHPDFPVKMILTQDDVALP
HQADKRGIAGTIFVLKIAGAAADQGRSLDEVAVIAETAAASMVSYGVALE
PCTIPGHEIDRNRLKINEMELGMGIHGEPGAERQNLQLENTTQFTRNLVY
EICGRLDVALREKQELVTTCRALAIMVNNLGAVPQSEMLIITQAVADYLY
GGGGQIINGNVHPVHVFSGSFMTSLQMNGVSITCLVLSQKNEIVEQLLHA
PTVCESWSKGFKLRPPSERPTFSNVSVASKTEISEEHSTKASGDGLGSGL
NLQTDNYIAVITDSLLEKCDELGALDRLTGDGDLGDTVRKACERIKADLI
TGRYANAAGNPHILFNSIAGSAGASGGSMGIFARIFLQEMAAYYQKNMGE
GTIPSWRDAFVKGTNAVMRHGGANVGDRTLVDALKPAADVLATPNSTLVQ
AAQAANVGSDSTKHMTRAKYGRSRNVDSRMLLNHADPGSVLVSTVMDAIA
KACRI*
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mRNA from alignment at tig00000853_pilon:398907..400955-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4151.t1 ID=Ggra4151.t1|Name=Ggra4151.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2049bp|location=Sequence derived from alignment at tig00000853_pilon:398907..400955- (Gracilaria gracilis GNS1m male)
ATGGCGAAACGCTTCATTAACGGCCGTGATACCGTAGTTCGAGATCTAAT
GGGAGGCTTAGCTCTCAATTCATCACTTGTAACCCTTCTCAATCCTGATG
AGGGAGGACATAATGTTGCAATTCGAGCATCTCTCACGGATGGTTCTTAT
ACACCAAGGGTATCAGTAGTAAGCGGCGGAGGAAGTGGGCATGAGCCTAT
GGCTGCGGGCTACGTGGGTGAAGGTATGCTGACGGCAGCTGTGGCAGGAG
AAATTTTCGCATCACCCTCGGCATCGGCTGTTTCGGCAATGCTCAGAGCA
ATTGTCCCGAAATCAACAGGAATCCTAGTTGTTGTGATGAATTATCAAGG
CGACAAGCTCAACTTTGGTGAAGCCATTCAAGAACTGAAACAATCTCATC
CTGACTTTCCAGTGAAAATGATTCTTACACAGGACGACGTGGCCTTACCT
CATCAAGCAGATAAACGAGGAATTGCTGGGACGATATTTGTTCTTAAGAT
AGCAGGGGCAGCTGCTGACCAAGGAAGGTCGCTAGATGAAGTCGCGGTGA
TTGCTGAAACCGCAGCAGCTTCTATGGTAAGCTATGGTGTTGCTCTGGAA
CCCTGTACGATTCCCGGGCATGAAATTGACAGAAACAGATTGAAGATCAA
TGAAAGTACGTTTAGAACTGCATCGTATATATACTCGCCTCTGCGTCGAA
ATAGAACTAACGTTCTATGACCATTTCCGCGAACGATTTTGTTTGACTTG
GGCTAACAAGTGGAACTGGGCATGGGTATTCACGGGGAACCCGGTGCAGA
AAGACAGAATCTGCAACTAGAGAACACGACTCAATTTACAAGAAATCTAG
TGTATGAGATATGCGGAAGGCTCGACGTTGCCCTACGCGAGAAACAAGAA
CTCGTTACCACATGCAGGGCGCTGGCCATAATGGTGAACAATCTGGGTGC
AGTTCCACAAAGTGAGATGCTCATTATAACCCAGGCGGTTGCCGACTATC
TCTATGGTGGGGGTGGTCAAATAATCAACGGCAATGTGCATCCAGTGCAC
GTTTTCAGCGGATCGTTCATGACATCACTACAAATGAATGGGGTATCCAT
AACTTGTCTCGTTCTTTCTCAGAAAAACGAGATTGTGGAACAACTGCTCC
ATGCCCCTACTGTGTGTGAATCGTGGTCTAAGGGATTCAAGCTTCGACCG
CCTTCTGAGAGGCCTACGTTTTCCAATGTCAGCGTTGCTTCTAAAACGGA
GATTTCAGAAGAGCATAGCACCAAGGCCTCTGGGGACGGCTTGGGCTCTG
GCTTGAACTTGCAAACGGATAACTACATAGCAGTAATTACGGATTCTTTA
CTTGAAAAGTGCGATGAGCTTGGAGCCTTGGATCGCCTTACCGGAGATGG
TGATCTAGGAGATACAGGTACGATATCTGCCGAACAACGAGCAGTGGCAA
TGACGAGCAAGTCCTCAAACTCTTATCACTAACCAACGCTGATTCGAATT
CCTACTACTCACTACACTGATACTAAATCTGATGGATCTTCAGTGCGTAA
GGCCTGCGAGAGGATCAAGGCAGATTTGATAACTGGAAGATATGCTAATG
CAGCTGGAAACCCACATATCTTGTTCAATAGTATAGCAGGTTCAGCCGGA
GCTTCAGGGGGGTCCATGGGTATTTTCGCTCGTATATTTCTTCAGGAAAT
GGCTGCTTACTATCAGAAAAACATGGGAGAAGGTACCATCCCTTCTTGGC
GGGATGCTTTTGTTAAGGGAACGAATGCAGTGATGCGACATGGTGGAGCA
AATGTAGGTGACAGAACTCTTGTAGACGCTCTGAAACCGGCTGCGGATGT
TTTGGCGACGCCCAACAGTACTCTGGTTCAAGCTGCCCAGGCAGCCAATG
TCGGGAGTGATTCCACCAAGCACATGACGAGAGCCAAATACGGCCGAAGC
AGAAATGTTGATTCACGCATGTTACTTAACCACGCTGATCCTGGGTCTGT
TCTCGTTTCTACCGTTATGGATGCCATCGCCAAAGCTTGTCGCATTTAA
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Coding sequence (CDS) from alignment at tig00000853_pilon:398907..400955-

>Ggra4151.t1 ID=Ggra4151.t1|Name=Ggra4151.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1818bp|location=Sequence derived from alignment at tig00000853_pilon:398907..400955- (Gracilaria gracilis GNS1m male)
ATGGCGAAACGCTTCATTAACGGCCGTGATACCGTAGTTCGAGATCTAAT
GGGAGGCTTAGCTCTCAATTCATCACTTGTAACCCTTCTCAATCCTGATG
AGGGAGGACATAATGTTGCAATTCGAGCATCTCTCACGGATGGTTCTTAT
ACACCAAGGGTATCAGTAGTAAGCGGCGGAGGAAGTGGGCATGAGCCTAT
GGCTGCGGGCTACGTGGGTGAAGGTATGCTGACGGCAGCTGTGGCAGGAG
AAATTTTCGCATCACCCTCGGCATCGGCTGTTTCGGCAATGCTCAGAGCA
ATTGTCCCGAAATCAACAGGAATCCTAGTTGTTGTGATGAATTATCAAGG
CGACAAGCTCAACTTTGGTGAAGCCATTCAAGAACTGAAACAATCTCATC
CTGACTTTCCAGTGAAAATGATTCTTACACAGGACGACGTGGCCTTACCT
CATCAAGCAGATAAACGAGGAATTGCTGGGACGATATTTGTTCTTAAGAT
AGCAGGGGCAGCTGCTGACCAAGGAAGGTCGCTAGATGAAGTCGCGGTGA
TTGCTGAAACCGCAGCAGCTTCTATGGTAAGCTATGGTGTTGCTCTGGAA
CCCTGTACGATTCCCGGGCATGAAATTGACAGAAACAGATTGAAGATCAA
TGAAATGGAACTGGGCATGGGTATTCACGGGGAACCCGGTGCAGAAAGAC
AGAATCTGCAACTAGAGAACACGACTCAATTTACAAGAAATCTAGTGTAT
GAGATATGCGGAAGGCTCGACGTTGCCCTACGCGAGAAACAAGAACTCGT
TACCACATGCAGGGCGCTGGCCATAATGGTGAACAATCTGGGTGCAGTTC
CACAAAGTGAGATGCTCATTATAACCCAGGCGGTTGCCGACTATCTCTAT
GGTGGGGGTGGTCAAATAATCAACGGCAATGTGCATCCAGTGCACGTTTT
CAGCGGATCGTTCATGACATCACTACAAATGAATGGGGTATCCATAACTT
GTCTCGTTCTTTCTCAGAAAAACGAGATTGTGGAACAACTGCTCCATGCC
CCTACTGTGTGTGAATCGTGGTCTAAGGGATTCAAGCTTCGACCGCCTTC
TGAGAGGCCTACGTTTTCCAATGTCAGCGTTGCTTCTAAAACGGAGATTT
CAGAAGAGCATAGCACCAAGGCCTCTGGGGACGGCTTGGGCTCTGGCTTG
AACTTGCAAACGGATAACTACATAGCAGTAATTACGGATTCTTTACTTGA
AAAGTGCGATGAGCTTGGAGCCTTGGATCGCCTTACCGGAGATGGTGATC
TAGGAGATACAGTGCGTAAGGCCTGCGAGAGGATCAAGGCAGATTTGATA
ACTGGAAGATATGCTAATGCAGCTGGAAACCCACATATCTTGTTCAATAG
TATAGCAGGTTCAGCCGGAGCTTCAGGGGGGTCCATGGGTATTTTCGCTC
GTATATTTCTTCAGGAAATGGCTGCTTACTATCAGAAAAACATGGGAGAA
GGTACCATCCCTTCTTGGCGGGATGCTTTTGTTAAGGGAACGAATGCAGT
GATGCGACATGGTGGAGCAAATGTAGGTGACAGAACTCTTGTAGACGCTC
TGAAACCGGCTGCGGATGTTTTGGCGACGCCCAACAGTACTCTGGTTCAA
GCTGCCCAGGCAGCCAATGTCGGGAGTGATTCCACCAAGCACATGACGAG
AGCCAAATACGGCCGAAGCAGAAATGTTGATTCACGCATGTTACTTAACC
ACGCTGATCCTGGGTCTGTTCTCGTTTCTACCGTTATGGATGCCATCGCC
AAAGCTTGTCGCATTTAA
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