Ggra4139.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4139.t1
Unique NameGgra4139.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:302993..303751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4139Ggra4139Gracilaria gracilis GNS1m malegenetig00000853_pilon 302993..303751 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4139.t1.stop1Ggra4139.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000853_pilon 302993..302995 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4139.t1.CDS1Ggra4139.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000853_pilon 302993..303751 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4139.t1.exon1Ggra4139.t1.exon1Gracilaria gracilis GNS1m maleexontig00000853_pilon 302993..303751 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4139.t1.start1Ggra4139.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000853_pilon 303749..303751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4139.t1Ggra4139.t1Gracilaria gracilis GNS1m malepolypeptidetig00000853_pilon 302993..303751 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4139.t1 ID=Ggra4139.t1|Name=Ggra4139.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=253bp
MKLPGRDGDSVGRVENEDDNSILKLVNSVVKEVPVRLPDVVRSIRVIIAN
YSYASLRLTSVSLQSGRWVTEPPEAILPRCVATLEVDGTSNRVADISVRV
AYQVGDREDVYMALRFLNPLLAPNAYSTECPTGFIIIQNGGERGGHVTTI
LSIWNCEKTEKPLREIGPTRSIPSSAEPLLFGRSKVSPHLPPITYAPPHA
ANSIPTNPNDPSKIAQLASLGFSENEAKVALQENESNLSKAYSALVDRKN
VD*
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spliced messenger RNA

>Ggra4139.t1 ID=Ggra4139.t1|Name=Ggra4139.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000853_pilon:302993..303751- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTCCCTGGTAGGGATGGTGATTCAGTTGGTCGTGTGGAGAATGA
AGATGACAATTCGATCCTGAAACTGGTGAATAGCGTCGTGAAGGAAGTGC
CTGTCCGACTTCCGGATGTTGTTCGGTCTATTCGAGTGATAATCGCCAAC
TATTCTTATGCATCTTTGCGGCTTACATCGGTTTCGTTACAGTCTGGGCG
ATGGGTTACCGAACCCCCAGAAGCAATTCTGCCTCGATGCGTCGCAACGC
TTGAAGTGGATGGTACATCGAATAGAGTAGCAGACATATCCGTTCGCGTT
GCGTATCAAGTCGGTGACAGGGAAGATGTATACATGGCACTTCGGTTTTT
GAATCCATTACTAGCTCCGAACGCCTATTCGACCGAATGCCCTACAGGGT
TCATAATCATACAAAACGGGGGAGAACGTGGCGGTCATGTTACAACTATT
CTGAGCATTTGGAACTGCGAGAAAACCGAGAAGCCCCTTCGAGAAATAGG
GCCCACTCGCAGCATACCTTCGTCAGCCGAACCGTTATTATTCGGAAGAA
GCAAAGTTTCTCCTCATTTACCCCCGATTACCTACGCACCTCCCCATGCG
GCGAACAGCATCCCTACCAATCCTAACGATCCGTCGAAAATTGCTCAACT
GGCTTCACTAGGCTTCTCTGAGAATGAAGCTAAGGTCGCCTTGCAAGAAA
ACGAGTCCAACCTCTCGAAAGCATATTCGGCTCTTGTGGATAGAAAGAAT
GTCGACTAA
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protein sequence of Ggra4139.t1

>Ggra4139.t1 ID=Ggra4139.t1|Name=Ggra4139.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MKLPGRDGDSVGRVENEDDNSILKLVNSVVKEVPVRLPDVVRSIRVIIAN
YSYASLRLTSVSLQSGRWVTEPPEAILPRCVATLEVDGTSNRVADISVRV
AYQVGDREDVYMALRFLNPLLAPNAYSTECPTGFIIIQNGGERGGHVTTI
LSIWNCEKTEKPLREIGPTRSIPSSAEPLLFGRSKVSPHLPPITYAPPHA
ANSIPTNPNDPSKIAQLASLGFSENEAKVALQENESNLSKAYSALVDRKN
VD*
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mRNA from alignment at tig00000853_pilon:302993..303751-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4139.t1 ID=Ggra4139.t1|Name=Ggra4139.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000853_pilon:302993..303751- (Gracilaria gracilis GNS1m male)
ATGAAGCTCCCTGGTAGGGATGGTGATTCAGTTGGTCGTGTGGAGAATGA
AGATGACAATTCGATCCTGAAACTGGTGAATAGCGTCGTGAAGGAAGTGC
CTGTCCGACTTCCGGATGTTGTTCGGTCTATTCGAGTGATAATCGCCAAC
TATTCTTATGCATCTTTGCGGCTTACATCGGTTTCGTTACAGTCTGGGCG
ATGGGTTACCGAACCCCCAGAAGCAATTCTGCCTCGATGCGTCGCAACGC
TTGAAGTGGATGGTACATCGAATAGAGTAGCAGACATATCCGTTCGCGTT
GCGTATCAAGTCGGTGACAGGGAAGATGTATACATGGCACTTCGGTTTTT
GAATCCATTACTAGCTCCGAACGCCTATTCGACCGAATGCCCTACAGGGT
TCATAATCATACAAAACGGGGGAGAACGTGGCGGTCATGTTACAACTATT
CTGAGCATTTGGAACTGCGAGAAAACCGAGAAGCCCCTTCGAGAAATAGG
GCCCACTCGCAGCATACCTTCGTCAGCCGAACCGTTATTATTCGGAAGAA
GCAAAGTTTCTCCTCATTTACCCCCGATTACCTACGCACCTCCCCATGCG
GCGAACAGCATCCCTACCAATCCTAACGATCCGTCGAAAATTGCTCAACT
GGCTTCACTAGGCTTCTCTGAGAATGAAGCTAAGGTCGCCTTGCAAGAAA
ACGAGTCCAACCTCTCGAAAGCATATTCGGCTCTTGTGGATAGAAAGAAT
GTCGACTAA
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Coding sequence (CDS) from alignment at tig00000853_pilon:302993..303751-

>Ggra4139.t1 ID=Ggra4139.t1|Name=Ggra4139.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=759bp|location=Sequence derived from alignment at tig00000853_pilon:302993..303751- (Gracilaria gracilis GNS1m male)
ATGAAGCTCCCTGGTAGGGATGGTGATTCAGTTGGTCGTGTGGAGAATGA
AGATGACAATTCGATCCTGAAACTGGTGAATAGCGTCGTGAAGGAAGTGC
CTGTCCGACTTCCGGATGTTGTTCGGTCTATTCGAGTGATAATCGCCAAC
TATTCTTATGCATCTTTGCGGCTTACATCGGTTTCGTTACAGTCTGGGCG
ATGGGTTACCGAACCCCCAGAAGCAATTCTGCCTCGATGCGTCGCAACGC
TTGAAGTGGATGGTACATCGAATAGAGTAGCAGACATATCCGTTCGCGTT
GCGTATCAAGTCGGTGACAGGGAAGATGTATACATGGCACTTCGGTTTTT
GAATCCATTACTAGCTCCGAACGCCTATTCGACCGAATGCCCTACAGGGT
TCATAATCATACAAAACGGGGGAGAACGTGGCGGTCATGTTACAACTATT
CTGAGCATTTGGAACTGCGAGAAAACCGAGAAGCCCCTTCGAGAAATAGG
GCCCACTCGCAGCATACCTTCGTCAGCCGAACCGTTATTATTCGGAAGAA
GCAAAGTTTCTCCTCATTTACCCCCGATTACCTACGCACCTCCCCATGCG
GCGAACAGCATCCCTACCAATCCTAACGATCCGTCGAAAATTGCTCAACT
GGCTTCACTAGGCTTCTCTGAGAATGAAGCTAAGGTCGCCTTGCAAGAAA
ACGAGTCCAACCTCTCGAAAGCATATTCGGCTCTTGTGGATAGAAAGAAT
GTCGACTAA
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