Ggra4090.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4090.t1
Unique NameGgra4090.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length561
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:97177..98859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog112098.XP_008604958.1
Preferred nameMINPP1
PFAMsHis_Phos_2
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017,RC00078,RC02809,RC02889
KEGG koko:K03103,ko:K07204,ko:K13811
KEGG ReactionR00509,R00529,R03434,R04928,R04929,R09532
KEGG Pathwayko00010,ko00230,ko00261,ko00450,ko00562,ko00920,ko01100,ko01120,ko01130,ko04136,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04714,ko04910,ko05206,map00010,map00230,map00261,map00450,map00562,map00920,map01100,map01120,map01130,map04136,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04714,map04910,map05206
KEGG ModuleM00176
GOsGO:0001503,GO:0003674,GO:0003824,GO:0003993,GO:0004446,GO:0004721,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006082,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006797,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0007424,GO:0008150,GO:0008152,GO:0009056,GO:0009888,GO:0009897,GO:0009986,GO:0009987,GO:0012505,GO:0016020,GO:0016052,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019318,GO:0019320,GO:0019538,GO:0019637,GO:0019751,GO:0023052,GO:0030175,GO:0030282,GO:0030351,GO:0030352,GO:0031214,GO:0031224,GO:0031225,GO:0031226,GO:0031233,GO:0031344,GO:0031346,GO:0031362,GO:0031974,GO:0031982,GO:0032501,GO:0032502,GO:0034416,GO:0034417,GO:0035556,GO:0036211,GO:0042578,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043647,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046365,GO:0046658,GO:0048015,GO:0048017,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051489,GO:0051491,GO:0051716,GO:0051717,GO:0052743,GO:0052745,GO:0052826,GO:0052827,GO:0060491,GO:0060541,GO:0065007,GO:0070013,GO:0070062,GO:0071704,GO:0071944,GO:0098552,GO:0098858,GO:0101006,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0140096,GO:1901564,GO:1901575,GO:1901615,GO:1903561
Evalue3.64e-16
EggNOG OGsKOG1382@1|root,KOG1382@2759|Eukaryota
EC2.7.1.25,2.7.7.4,3.1.3.62,3.1.3.80
Descriptionbisphosphoglycerate 3-phosphatase activity
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4090Ggra4090Gracilaria gracilis GNS1m malegenetig00000853_pilon 97177..98859 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4090.t1.start1Ggra4090.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000853_pilon 97177..97179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4090.t1.CDS1Ggra4090.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000853_pilon 97177..98859 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4090.t1.exon1Ggra4090.t1.exon1Gracilaria gracilis GNS1m maleexontig00000853_pilon 97177..98859 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4090.t1.stop1Ggra4090.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000853_pilon 98857..98859 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4090.t1Ggra4090.t1Gracilaria gracilis GNS1m malepolypeptidetig00000853_pilon 97177..98859 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4090.t1 ID=Ggra4090.t1|Name=Ggra4090.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=561bp
MDLLDDDSLAAPDRCAVAFHHQPVAPHLYALPLLPRQPHPLRRFTSSPSL
DSVAAVFQELAAKLPLTHTPATLQLKPTRRTSNPQSPSCTHFVPSFSTTL
DFGSKTPYPHPASLQPLHNHHQHQPARLIHVSLIARHGTRNPTNSCIQRV
TALHTWLHSALSPVPLWLHQWSAQLDVYRASPGSLTSHGHQELHAIGARF
ARLYAYALHAVGNTVRLRSSYKARAISSARAFLDGYRHTCSTNRLPQPNT
LVVEESTPPATPPPSILSESSEQSEVPEVPSTHFDHYTQSPPTEYSSDAS
TDEEALLEILPSGRDKVLRYFDHHVEYAQFALHHKALTLRHLSRGPLLPI
ATEIAKRISKGLGAPQPMEPALIRSVAEAGAFENAHGRFDRSAFCTVLTP
KDTAILELFEKYHRPFFQQLDRFRAVAAPLVADLAQSLRASAARAGDPGV
HAADLRFAHAETLVPLLILLGIDGNGLATDSPQYRSGLSAMSPFAANLAF
ELYEQESDGVKTHFVRLRLHERYVEYIPVLGEHGATGIVPLQVLLDYFDD
ILEEGMHFYE*
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spliced messenger RNA

>Ggra4090.t1 ID=Ggra4090.t1|Name=Ggra4090.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1683bp|location=Sequence derived from alignment at tig00000853_pilon:97177..98859+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCTTCTTGATGACGACTCGCTCGCCGCGCCTGACCGTTGCGCCGT
CGCCTTTCACCATCAGCCGGTCGCGCCTCACCTGTACGCCCTGCCCCTTC
TTCCGCGCCAGCCGCATCCGCTGCGCCGCTTCACCTCCTCGCCCAGTCTC
GACTCGGTCGCCGCCGTCTTCCAGGAGCTCGCCGCCAAACTGCCGCTCAC
CCACACCCCCGCCACGCTTCAGCTCAAGCCAACCCGCCGCACCTCCAACC
CGCAGTCGCCTTCCTGCACCCACTTTGTGCCCTCCTTCTCCACCACCCTC
GACTTTGGTTCAAAGACGCCCTACCCGCACCCGGCCTCGTTACAGCCGCT
GCACAACCATCATCAGCACCAACCCGCCCGCCTCATCCACGTCTCGCTCA
TTGCGCGTCACGGCACGCGCAACCCAACCAACAGCTGCATTCAGCGCGTA
ACCGCCTTGCACACCTGGCTGCACTCCGCGCTTTCCCCCGTTCCGCTGTG
GCTGCACCAATGGTCCGCCCAGCTGGACGTGTACCGCGCCAGTCCGGGTT
CCCTCACCTCGCACGGTCATCAAGAGCTGCACGCCATCGGTGCCCGATTT
GCCCGTCTCTACGCGTACGCTCTGCACGCTGTGGGCAACACCGTCAGACT
GCGCTCCTCGTACAAGGCCAGAGCCATATCCTCTGCCCGAGCCTTTCTGG
ACGGCTACCGACACACCTGTTCCACAAACCGACTGCCGCAGCCCAATACC
TTGGTGGTCGAAGAGAGTACGCCGCCTGCCACTCCCCCGCCATCAATCCT
CAGCGAATCTTCAGAACAATCTGAAGTGCCCGAAGTGCCGTCCACTCACT
TTGACCATTACACCCAATCACCGCCCACTGAATACAGTTCAGACGCGTCA
ACGGACGAAGAAGCTTTGCTCGAGATACTGCCTAGCGGACGAGACAAGGT
CTTGCGCTATTTTGACCACCATGTGGAGTATGCCCAGTTCGCCCTTCATC
ACAAAGCCCTTACACTGCGTCATTTATCACGAGGCCCGCTACTGCCCATT
GCTACCGAGATTGCTAAGCGCATCTCAAAAGGGTTAGGCGCGCCCCAACC
GATGGAGCCGGCGCTCATTCGCTCTGTCGCCGAAGCAGGCGCATTTGAGA
ACGCGCATGGCAGGTTTGATCGCAGTGCCTTTTGTACTGTTCTCACCCCA
AAGGACACAGCTATTCTGGAGCTGTTCGAGAAGTATCATCGTCCGTTCTT
TCAGCAGCTTGATCGATTCAGAGCGGTTGCAGCCCCTCTTGTGGCTGACC
TTGCGCAGTCATTACGCGCAAGCGCTGCACGCGCGGGTGACCCCGGCGTA
CATGCGGCTGACTTGCGCTTTGCTCACGCGGAAACTCTGGTGCCTTTGTT
GATACTGCTTGGTATTGATGGCAATGGACTGGCCACTGACTCGCCACAGT
ACCGTTCTGGGCTGAGCGCAATGAGTCCGTTTGCAGCCAATCTGGCTTTT
GAACTGTATGAACAAGAAAGTGACGGTGTTAAGACGCACTTTGTCCGGCT
TCGTCTTCATGAACGATATGTGGAATACATTCCCGTGCTGGGAGAGCATG
GAGCGACAGGGATTGTGCCATTGCAAGTACTGCTTGACTACTTTGATGAC
ATACTCGAGGAAGGAATGCATTTCTACGAATAG
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protein sequence of Ggra4090.t1

>Ggra4090.t1 ID=Ggra4090.t1|Name=Ggra4090.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=561bp
MDLLDDDSLAAPDRCAVAFHHQPVAPHLYALPLLPRQPHPLRRFTSSPSL
DSVAAVFQELAAKLPLTHTPATLQLKPTRRTSNPQSPSCTHFVPSFSTTL
DFGSKTPYPHPASLQPLHNHHQHQPARLIHVSLIARHGTRNPTNSCIQRV
TALHTWLHSALSPVPLWLHQWSAQLDVYRASPGSLTSHGHQELHAIGARF
ARLYAYALHAVGNTVRLRSSYKARAISSARAFLDGYRHTCSTNRLPQPNT
LVVEESTPPATPPPSILSESSEQSEVPEVPSTHFDHYTQSPPTEYSSDAS
TDEEALLEILPSGRDKVLRYFDHHVEYAQFALHHKALTLRHLSRGPLLPI
ATEIAKRISKGLGAPQPMEPALIRSVAEAGAFENAHGRFDRSAFCTVLTP
KDTAILELFEKYHRPFFQQLDRFRAVAAPLVADLAQSLRASAARAGDPGV
HAADLRFAHAETLVPLLILLGIDGNGLATDSPQYRSGLSAMSPFAANLAF
ELYEQESDGVKTHFVRLRLHERYVEYIPVLGEHGATGIVPLQVLLDYFDD
ILEEGMHFYE*
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mRNA from alignment at tig00000853_pilon:97177..98859+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4090.t1 ID=Ggra4090.t1|Name=Ggra4090.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1683bp|location=Sequence derived from alignment at tig00000853_pilon:97177..98859+ (Gracilaria gracilis GNS1m male)
ATGGATCTTCTTGATGACGACTCGCTCGCCGCGCCTGACCGTTGCGCCGT
CGCCTTTCACCATCAGCCGGTCGCGCCTCACCTGTACGCCCTGCCCCTTC
TTCCGCGCCAGCCGCATCCGCTGCGCCGCTTCACCTCCTCGCCCAGTCTC
GACTCGGTCGCCGCCGTCTTCCAGGAGCTCGCCGCCAAACTGCCGCTCAC
CCACACCCCCGCCACGCTTCAGCTCAAGCCAACCCGCCGCACCTCCAACC
CGCAGTCGCCTTCCTGCACCCACTTTGTGCCCTCCTTCTCCACCACCCTC
GACTTTGGTTCAAAGACGCCCTACCCGCACCCGGCCTCGTTACAGCCGCT
GCACAACCATCATCAGCACCAACCCGCCCGCCTCATCCACGTCTCGCTCA
TTGCGCGTCACGGCACGCGCAACCCAACCAACAGCTGCATTCAGCGCGTA
ACCGCCTTGCACACCTGGCTGCACTCCGCGCTTTCCCCCGTTCCGCTGTG
GCTGCACCAATGGTCCGCCCAGCTGGACGTGTACCGCGCCAGTCCGGGTT
CCCTCACCTCGCACGGTCATCAAGAGCTGCACGCCATCGGTGCCCGATTT
GCCCGTCTCTACGCGTACGCTCTGCACGCTGTGGGCAACACCGTCAGACT
GCGCTCCTCGTACAAGGCCAGAGCCATATCCTCTGCCCGAGCCTTTCTGG
ACGGCTACCGACACACCTGTTCCACAAACCGACTGCCGCAGCCCAATACC
TTGGTGGTCGAAGAGAGTACGCCGCCTGCCACTCCCCCGCCATCAATCCT
CAGCGAATCTTCAGAACAATCTGAAGTGCCCGAAGTGCCGTCCACTCACT
TTGACCATTACACCCAATCACCGCCCACTGAATACAGTTCAGACGCGTCA
ACGGACGAAGAAGCTTTGCTCGAGATACTGCCTAGCGGACGAGACAAGGT
CTTGCGCTATTTTGACCACCATGTGGAGTATGCCCAGTTCGCCCTTCATC
ACAAAGCCCTTACACTGCGTCATTTATCACGAGGCCCGCTACTGCCCATT
GCTACCGAGATTGCTAAGCGCATCTCAAAAGGGTTAGGCGCGCCCCAACC
GATGGAGCCGGCGCTCATTCGCTCTGTCGCCGAAGCAGGCGCATTTGAGA
ACGCGCATGGCAGGTTTGATCGCAGTGCCTTTTGTACTGTTCTCACCCCA
AAGGACACAGCTATTCTGGAGCTGTTCGAGAAGTATCATCGTCCGTTCTT
TCAGCAGCTTGATCGATTCAGAGCGGTTGCAGCCCCTCTTGTGGCTGACC
TTGCGCAGTCATTACGCGCAAGCGCTGCACGCGCGGGTGACCCCGGCGTA
CATGCGGCTGACTTGCGCTTTGCTCACGCGGAAACTCTGGTGCCTTTGTT
GATACTGCTTGGTATTGATGGCAATGGACTGGCCACTGACTCGCCACAGT
ACCGTTCTGGGCTGAGCGCAATGAGTCCGTTTGCAGCCAATCTGGCTTTT
GAACTGTATGAACAAGAAAGTGACGGTGTTAAGACGCACTTTGTCCGGCT
TCGTCTTCATGAACGATATGTGGAATACATTCCCGTGCTGGGAGAGCATG
GAGCGACAGGGATTGTGCCATTGCAAGTACTGCTTGACTACTTTGATGAC
ATACTCGAGGAAGGAATGCATTTCTACGAATAG
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Coding sequence (CDS) from alignment at tig00000853_pilon:97177..98859+

>Ggra4090.t1 ID=Ggra4090.t1|Name=Ggra4090.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1683bp|location=Sequence derived from alignment at tig00000853_pilon:97177..98859+ (Gracilaria gracilis GNS1m male)
ATGGATCTTCTTGATGACGACTCGCTCGCCGCGCCTGACCGTTGCGCCGT
CGCCTTTCACCATCAGCCGGTCGCGCCTCACCTGTACGCCCTGCCCCTTC
TTCCGCGCCAGCCGCATCCGCTGCGCCGCTTCACCTCCTCGCCCAGTCTC
GACTCGGTCGCCGCCGTCTTCCAGGAGCTCGCCGCCAAACTGCCGCTCAC
CCACACCCCCGCCACGCTTCAGCTCAAGCCAACCCGCCGCACCTCCAACC
CGCAGTCGCCTTCCTGCACCCACTTTGTGCCCTCCTTCTCCACCACCCTC
GACTTTGGTTCAAAGACGCCCTACCCGCACCCGGCCTCGTTACAGCCGCT
GCACAACCATCATCAGCACCAACCCGCCCGCCTCATCCACGTCTCGCTCA
TTGCGCGTCACGGCACGCGCAACCCAACCAACAGCTGCATTCAGCGCGTA
ACCGCCTTGCACACCTGGCTGCACTCCGCGCTTTCCCCCGTTCCGCTGTG
GCTGCACCAATGGTCCGCCCAGCTGGACGTGTACCGCGCCAGTCCGGGTT
CCCTCACCTCGCACGGTCATCAAGAGCTGCACGCCATCGGTGCCCGATTT
GCCCGTCTCTACGCGTACGCTCTGCACGCTGTGGGCAACACCGTCAGACT
GCGCTCCTCGTACAAGGCCAGAGCCATATCCTCTGCCCGAGCCTTTCTGG
ACGGCTACCGACACACCTGTTCCACAAACCGACTGCCGCAGCCCAATACC
TTGGTGGTCGAAGAGAGTACGCCGCCTGCCACTCCCCCGCCATCAATCCT
CAGCGAATCTTCAGAACAATCTGAAGTGCCCGAAGTGCCGTCCACTCACT
TTGACCATTACACCCAATCACCGCCCACTGAATACAGTTCAGACGCGTCA
ACGGACGAAGAAGCTTTGCTCGAGATACTGCCTAGCGGACGAGACAAGGT
CTTGCGCTATTTTGACCACCATGTGGAGTATGCCCAGTTCGCCCTTCATC
ACAAAGCCCTTACACTGCGTCATTTATCACGAGGCCCGCTACTGCCCATT
GCTACCGAGATTGCTAAGCGCATCTCAAAAGGGTTAGGCGCGCCCCAACC
GATGGAGCCGGCGCTCATTCGCTCTGTCGCCGAAGCAGGCGCATTTGAGA
ACGCGCATGGCAGGTTTGATCGCAGTGCCTTTTGTACTGTTCTCACCCCA
AAGGACACAGCTATTCTGGAGCTGTTCGAGAAGTATCATCGTCCGTTCTT
TCAGCAGCTTGATCGATTCAGAGCGGTTGCAGCCCCTCTTGTGGCTGACC
TTGCGCAGTCATTACGCGCAAGCGCTGCACGCGCGGGTGACCCCGGCGTA
CATGCGGCTGACTTGCGCTTTGCTCACGCGGAAACTCTGGTGCCTTTGTT
GATACTGCTTGGTATTGATGGCAATGGACTGGCCACTGACTCGCCACAGT
ACCGTTCTGGGCTGAGCGCAATGAGTCCGTTTGCAGCCAATCTGGCTTTT
GAACTGTATGAACAAGAAAGTGACGGTGTTAAGACGCACTTTGTCCGGCT
TCGTCTTCATGAACGATATGTGGAATACATTCCCGTGCTGGGAGAGCATG
GAGCGACAGGGATTGTGCCATTGCAAGTACTGCTTGACTACTTTGATGAC
ATACTCGAGGAAGGAATGCATTTCTACGAATAG
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