Ggra3997.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3997.t1
Unique NameGgra3997.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:308822..310003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3997Ggra3997Gracilaria gracilis GNS1m malegenetig00000908_pilon 308822..310003 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3997.t1.stop1Ggra3997.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 308822..308824 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3997.t1.CDS1Ggra3997.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 308822..310003 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3997.t1.exon1Ggra3997.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 308822..310003 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3997.t1.start1Ggra3997.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 310001..310003 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3997.t1Ggra3997.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 308822..310003 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3997.t1 ID=Ggra3997.t1|Name=Ggra3997.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=394bp
MVNVQYMLRRLTHVALDAHFTLVEPFVYQSKVWLWRSLPHMFERHNQSAQ
PAATYWRTEELYHTQRYISFAQFERRARELHRRPRTLFIHAALFFSWEPQ
PKQQRPLFWCDQRLRELPGAWNRSTNSHHLTPHVRVARALCASPAALTNA
SFFHALFAAARRGSRAPPLACGGCTTVAAANWRKHAVQAYRSRLGARVGA
LRVPPLRPSARAYALAGAFASRALRADARGRFVAVHLRSGKAYTLLTRRN
GDSDGDGDGRFERWLARCVRSVLAAAREHDARARRRWPLLVASDLFNDGW
LGGETAANNRSRRALRGARAALLAGGARRFDGGALRQDRMGVASAVDAAL
CSGAAHFVWARPSSFGRWVSELRARRGARSVSVPCAIAADSLA*
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spliced messenger RNA

>Ggra3997.t1 ID=Ggra3997.t1|Name=Ggra3997.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000908_pilon:308822..310003- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGAACGTGCAGTACATGCTGCGACGGCTGACGCACGTGGCGCTGGA
CGCGCACTTTACGCTGGTGGAGCCGTTCGTGTACCAGTCCAAGGTGTGGC
TGTGGCGCTCGCTGCCGCACATGTTTGAGCGCCACAACCAGTCGGCGCAG
CCGGCCGCCACCTACTGGCGCACCGAGGAGCTGTACCACACGCAGCGCTA
CATTTCGTTTGCGCAGTTTGAACGGCGCGCGCGCGAGCTGCACCGCCGCC
CGCGCACGCTGTTCATCCACGCCGCGCTGTTCTTCAGCTGGGAGCCGCAG
CCAAAGCAGCAACGGCCGTTGTTCTGGTGCGACCAGCGGCTGCGCGAGCT
GCCCGGCGCGTGGAACCGCAGCACCAACAGCCACCATCTGACGCCGCACG
TGCGCGTGGCGCGCGCGCTATGCGCGTCGCCGGCCGCGCTCACCAACGCC
TCCTTCTTCCACGCGCTGTTTGCCGCGGCGCGGCGCGGCTCGCGCGCGCC
GCCTCTGGCGTGCGGCGGCTGCACGACGGTGGCGGCCGCCAATTGGCGCA
AGCACGCCGTGCAAGCGTACCGCAGCCGCCTCGGCGCGCGCGTGGGCGCG
CTGCGCGTGCCGCCGCTGCGCCCGTCCGCGCGCGCTTACGCGCTGGCGGG
CGCGTTTGCGAGCCGCGCGCTGCGCGCCGACGCGCGCGGCCGCTTTGTGG
CGGTGCACCTGCGCTCCGGCAAGGCGTACACGCTGCTGACGCGCCGCAAC
GGCGACAGCGACGGCGACGGCGACGGCAGGTTCGAACGCTGGCTGGCGCG
CTGCGTGCGCTCCGTGCTGGCGGCGGCGCGCGAGCACGATGCGCGCGCGC
GGCGGCGGTGGCCGCTGCTGGTGGCGTCCGACCTGTTCAACGACGGCTGG
CTGGGCGGCGAGACGGCGGCCAACAACCGCTCGCGGCGCGCGCTGCGCGG
CGCGAGGGCGGCGCTGCTGGCGGGCGGCGCGCGGCGCTTCGACGGCGGCG
CGCTGCGGCAGGACCGCATGGGCGTGGCGTCCGCCGTGGACGCGGCGCTT
TGTAGCGGCGCCGCGCACTTTGTGTGGGCGCGCCCGTCCAGCTTCGGGCG
CTGGGTCAGTGAGCTGCGCGCTCGCCGCGGCGCGCGCTCCGTCAGCGTGC
CGTGCGCCATCGCTGCCGACTCGCTTGCTTGA
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protein sequence of Ggra3997.t1

>Ggra3997.t1 ID=Ggra3997.t1|Name=Ggra3997.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MVNVQYMLRRLTHVALDAHFTLVEPFVYQSKVWLWRSLPHMFERHNQSAQ
PAATYWRTEELYHTQRYISFAQFERRARELHRRPRTLFIHAALFFSWEPQ
PKQQRPLFWCDQRLRELPGAWNRSTNSHHLTPHVRVARALCASPAALTNA
SFFHALFAAARRGSRAPPLACGGCTTVAAANWRKHAVQAYRSRLGARVGA
LRVPPLRPSARAYALAGAFASRALRADARGRFVAVHLRSGKAYTLLTRRN
GDSDGDGDGRFERWLARCVRSVLAAAREHDARARRRWPLLVASDLFNDGW
LGGETAANNRSRRALRGARAALLAGGARRFDGGALRQDRMGVASAVDAAL
CSGAAHFVWARPSSFGRWVSELRARRGARSVSVPCAIAADSLA*
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mRNA from alignment at tig00000908_pilon:308822..310003-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3997.t1 ID=Ggra3997.t1|Name=Ggra3997.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000908_pilon:308822..310003- (Gracilaria gracilis GNS1m male)
ATGGTGAACGTGCAGTACATGCTGCGACGGCTGACGCACGTGGCGCTGGA
CGCGCACTTTACGCTGGTGGAGCCGTTCGTGTACCAGTCCAAGGTGTGGC
TGTGGCGCTCGCTGCCGCACATGTTTGAGCGCCACAACCAGTCGGCGCAG
CCGGCCGCCACCTACTGGCGCACCGAGGAGCTGTACCACACGCAGCGCTA
CATTTCGTTTGCGCAGTTTGAACGGCGCGCGCGCGAGCTGCACCGCCGCC
CGCGCACGCTGTTCATCCACGCCGCGCTGTTCTTCAGCTGGGAGCCGCAG
CCAAAGCAGCAACGGCCGTTGTTCTGGTGCGACCAGCGGCTGCGCGAGCT
GCCCGGCGCGTGGAACCGCAGCACCAACAGCCACCATCTGACGCCGCACG
TGCGCGTGGCGCGCGCGCTATGCGCGTCGCCGGCCGCGCTCACCAACGCC
TCCTTCTTCCACGCGCTGTTTGCCGCGGCGCGGCGCGGCTCGCGCGCGCC
GCCTCTGGCGTGCGGCGGCTGCACGACGGTGGCGGCCGCCAATTGGCGCA
AGCACGCCGTGCAAGCGTACCGCAGCCGCCTCGGCGCGCGCGTGGGCGCG
CTGCGCGTGCCGCCGCTGCGCCCGTCCGCGCGCGCTTACGCGCTGGCGGG
CGCGTTTGCGAGCCGCGCGCTGCGCGCCGACGCGCGCGGCCGCTTTGTGG
CGGTGCACCTGCGCTCCGGCAAGGCGTACACGCTGCTGACGCGCCGCAAC
GGCGACAGCGACGGCGACGGCGACGGCAGGTTCGAACGCTGGCTGGCGCG
CTGCGTGCGCTCCGTGCTGGCGGCGGCGCGCGAGCACGATGCGCGCGCGC
GGCGGCGGTGGCCGCTGCTGGTGGCGTCCGACCTGTTCAACGACGGCTGG
CTGGGCGGCGAGACGGCGGCCAACAACCGCTCGCGGCGCGCGCTGCGCGG
CGCGAGGGCGGCGCTGCTGGCGGGCGGCGCGCGGCGCTTCGACGGCGGCG
CGCTGCGGCAGGACCGCATGGGCGTGGCGTCCGCCGTGGACGCGGCGCTT
TGTAGCGGCGCCGCGCACTTTGTGTGGGCGCGCCCGTCCAGCTTCGGGCG
CTGGGTCAGTGAGCTGCGCGCTCGCCGCGGCGCGCGCTCCGTCAGCGTGC
CGTGCGCCATCGCTGCCGACTCGCTTGCTTGA
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Coding sequence (CDS) from alignment at tig00000908_pilon:308822..310003-

>Ggra3997.t1 ID=Ggra3997.t1|Name=Ggra3997.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1182bp|location=Sequence derived from alignment at tig00000908_pilon:308822..310003- (Gracilaria gracilis GNS1m male)
ATGGTGAACGTGCAGTACATGCTGCGACGGCTGACGCACGTGGCGCTGGA
CGCGCACTTTACGCTGGTGGAGCCGTTCGTGTACCAGTCCAAGGTGTGGC
TGTGGCGCTCGCTGCCGCACATGTTTGAGCGCCACAACCAGTCGGCGCAG
CCGGCCGCCACCTACTGGCGCACCGAGGAGCTGTACCACACGCAGCGCTA
CATTTCGTTTGCGCAGTTTGAACGGCGCGCGCGCGAGCTGCACCGCCGCC
CGCGCACGCTGTTCATCCACGCCGCGCTGTTCTTCAGCTGGGAGCCGCAG
CCAAAGCAGCAACGGCCGTTGTTCTGGTGCGACCAGCGGCTGCGCGAGCT
GCCCGGCGCGTGGAACCGCAGCACCAACAGCCACCATCTGACGCCGCACG
TGCGCGTGGCGCGCGCGCTATGCGCGTCGCCGGCCGCGCTCACCAACGCC
TCCTTCTTCCACGCGCTGTTTGCCGCGGCGCGGCGCGGCTCGCGCGCGCC
GCCTCTGGCGTGCGGCGGCTGCACGACGGTGGCGGCCGCCAATTGGCGCA
AGCACGCCGTGCAAGCGTACCGCAGCCGCCTCGGCGCGCGCGTGGGCGCG
CTGCGCGTGCCGCCGCTGCGCCCGTCCGCGCGCGCTTACGCGCTGGCGGG
CGCGTTTGCGAGCCGCGCGCTGCGCGCCGACGCGCGCGGCCGCTTTGTGG
CGGTGCACCTGCGCTCCGGCAAGGCGTACACGCTGCTGACGCGCCGCAAC
GGCGACAGCGACGGCGACGGCGACGGCAGGTTCGAACGCTGGCTGGCGCG
CTGCGTGCGCTCCGTGCTGGCGGCGGCGCGCGAGCACGATGCGCGCGCGC
GGCGGCGGTGGCCGCTGCTGGTGGCGTCCGACCTGTTCAACGACGGCTGG
CTGGGCGGCGAGACGGCGGCCAACAACCGCTCGCGGCGCGCGCTGCGCGG
CGCGAGGGCGGCGCTGCTGGCGGGCGGCGCGCGGCGCTTCGACGGCGGCG
CGCTGCGGCAGGACCGCATGGGCGTGGCGTCCGCCGTGGACGCGGCGCTT
TGTAGCGGCGCCGCGCACTTTGTGTGGGCGCGCCCGTCCAGCTTCGGGCG
CTGGGTCAGTGAGCTGCGCGCTCGCCGCGGCGCGCGCTCCGTCAGCGTGC
CGTGCGCCATCGCTGCCGACTCGCTTGCTTGA
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