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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 118161.KB235922_gene1664 |
| PFAMs | Big_5,GSDH,Malectin,TIG |
| Max annot lvl | 1117|Cyanobacteria |
| Evalue | 3.94e-61 |
| EggNOG OGs | COG2133@1|root,COG2982@1|root,COG3210@1|root,COG2133@2|Bacteria,COG2982@2|Bacteria,COG3210@2|Bacteria,1G17Y@1117|Cyanobacteria |
| Description | Glucose / Sorbosone dehydrogenase |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3987.t1.stop1 | Ggra3987.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000908_pilon 291310..291312 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3987.t1.start1 | Ggra3987.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000908_pilon 293956..293958 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra3987.t1 ID=Ggra3987.t1|Name=Ggra3987.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=883bp MKRSAKICWIGFVISTIVIAAVAGLVLYFTAFKDELAGPFTELQPDPQSG TSLVDHLAHAVPGFEYREVDFNGDGVESVQLDGSRSHTHFFDAGPPIIEG KLVEMIWFNKETGDRLGTGPRPIAEFPVGKTTVGLTVTDNHDDSHTDYAT VIIDKPIDPGAYCYYYEKSSSSTISLADKLADGERPVFASKVSDIDFASV SDFHASQTSKQFQMRCNFLVKGGKTTKFSITHVGPVRLLVADELVLESDA TDERSTSSSYEIPSGTHTVQLLYSRSSTSDAKLQLTAEGQKLQCDLSDIL PVLTAVDPRSSQLSAGGTATIYGVGLFNGVEIRFGEKNIDILVDQSTETE VLVTVPESSESGVVYITASNRVGTSNGLAFQYSSSALPPIRFSESRVRDG SKPIVLNLITGIKYGPDHRYYASAINSVVHSFSAGYDMKASDLCTSPSLG KHRAILGLAFNPADTDVKLYVSASVLDWKKSGKLNTPRGWANGHILLLKK DVDGKCLDKVGDPVITGLPVSNHDHGVNGLVFDNDGKLHIQIGGFTNAGL NDASSRLGGFDENPLSGASLVADVNKPGFNGNVEYDANNPAKANQVGGDV MVYSPGWRNSFGINIHSNGFLYATDNGASAGFGDMSVSCTASTKYVGKNL DDKLGKVIEGKYAGHPNRNRGKKDPRECKFMDSKEKSNGFYQKPIATFES STNGVMEYTANSFKGQLKGDIMCSKYTTESSPGKMFRVQLDDNGNLKKGP DELWLSSGLSIEMSPYGQILMPRVYKKEVIVLSPITENGILPVFTAVLPF RGPSKGGNEVIVTGENLAEGAVAVFGDKKCTSVSSVSSDKRSFKCKVPPG SPGQRVSISLQFSDSTLNVGAGSGVDYVYMNV* back to topspliced messenger RNA >Ggra3987.t1 ID=Ggra3987.t1|Name=Ggra3987.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2649bp|location=Sequence derived from alignment at tig00000908_pilon:291310..293958- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGCGTTCGGCCAAGATTTGTTGGATTGGCTTTGTCATCTCCACCAT TGTCATAGCCGCTGTTGCTGGACTTGTCTTGTATTTCACCGCCTTCAAGG ATGAACTGGCTGGCCCTTTCACCGAGTTGCAGCCGGACCCCCAGTCGGGT ACTTCGCTCGTCGACCATCTTGCGCACGCAGTGCCCGGCTTCGAATACCG CGAGGTCGATTTCAATGGCGATGGCGTAGAATCCGTGCAGCTTGACGGCT CACGCTCTCACACCCATTTCTTCGATGCGGGACCGCCTATCATCGAAGGC AAGCTCGTCGAGATGATTTGGTTCAATAAGGAGACTGGCGATCGACTTGG CACAGGTCCGAGACCCATTGCTGAATTTCCCGTCGGAAAGACTACTGTTG GGCTCACTGTAACTGACAACCACGATGATTCTCACACCGATTATGCCACT GTCATTATTGACAAACCTATTGATCCCGGCGCCTATTGCTATTACTACGA AAAATCTTCCTCTTCCACAATTTCGCTTGCCGATAAGCTTGCTGATGGTG AGCGTCCCGTCTTCGCTTCCAAGGTGTCCGACATTGATTTTGCTTCCGTC TCCGACTTCCATGCCTCCCAAACATCCAAACAGTTTCAAATGCGCTGCAA CTTCCTCGTCAAGGGAGGAAAGACAACCAAGTTTTCCATCACTCATGTTG GACCTGTGCGTCTCCTCGTTGCCGATGAGCTTGTTCTAGAATCCGATGCA ACCGATGAAAGATCTACCTCCTCCTCCTACGAAATTCCATCCGGCACACA TACCGTACAACTTCTCTACTCACGCTCATCAACATCTGACGCTAAACTAC AGCTTACTGCCGAGGGACAAAAGCTCCAGTGCGACTTGTCCGACATCCTT CCTGTCTTAACCGCCGTTGACCCTCGCTCATCGCAGCTTTCCGCCGGAGG TACTGCTACGATATATGGCGTGGGCCTGTTTAATGGCGTAGAGATTCGTT TCGGGGAGAAGAATATTGACATTCTTGTCGACCAATCTACCGAAACTGAG GTGCTTGTTACCGTACCTGAGTCCTCAGAGTCCGGCGTTGTTTACATTAC TGCATCCAACAGGGTGGGCACCTCCAACGGTTTAGCATTCCAATATTCGA GTTCTGCGTTGCCTCCCATTCGGTTTAGCGAATCTCGCGTGCGTGACGGT TCGAAGCCCATAGTGCTCAATCTGATTACCGGAATCAAGTACGGTCCAGA CCACAGATACTATGCTTCGGCCATCAACAGCGTTGTTCACTCATTTTCCG CGGGTTATGATATGAAGGCCAGTGATCTTTGTACGTCACCTTCTCTGGGG AAGCATCGCGCAATACTTGGCTTGGCTTTCAATCCAGCGGATACTGACGT GAAGTTATATGTATCTGCTTCTGTTCTGGATTGGAAGAAGAGCGGCAAGT TGAACACACCACGTGGCTGGGCTAACGGTCACATTTTGCTCCTCAAGAAG GATGTTGACGGCAAGTGCCTGGACAAAGTTGGCGACCCCGTTATTACCGG GCTTCCCGTATCAAACCATGACCACGGCGTGAATGGTTTGGTTTTCGACA ATGATGGAAAGCTACACATACAAATTGGTGGGTTCACCAATGCTGGTCTG AATGACGCGAGCTCTAGACTGGGTGGATTTGACGAGAATCCGCTTAGTGG TGCTAGTTTAGTGGCAGATGTGAACAAGCCTGGTTTCAACGGCAATGTGG AGTATGATGCGAACAATCCAGCTAAAGCGAATCAAGTCGGTGGGGACGTC ATGGTTTACTCCCCAGGATGGCGAAATTCATTTGGTATCAACATTCATTC GAACGGGTTTTTGTATGCCACCGACAATGGTGCTTCGGCTGGGTTTGGAG ATATGTCTGTTTCATGTACTGCTTCTACCAAGTACGTTGGAAAGAATCTG GACGATAAGCTTGGAAAGGTTATAGAAGGCAAGTATGCAGGTCATCCAAA CCGCAACAGGGGTAAAAAGGATCCGAGAGAATGTAAGTTCATGGACTCAA AGGAAAAGTCAAATGGGTTCTATCAGAAACCAATCGCTACATTTGAGTCA TCCACTAATGGTGTTATGGAGTACACAGCAAACAGCTTCAAAGGACAGCT CAAGGGAGATATCATGTGTTCCAAGTATACTACCGAGAGCTCGCCAGGGA AAATGTTCCGAGTGCAACTGGATGACAACGGAAACCTGAAGAAGGGGCCC GATGAGTTATGGTTGTCCAGTGGGCTGTCCATTGAGATGTCTCCTTACGG CCAAATTCTTATGCCCCGAGTTTACAAAAAGGAAGTCATTGTTCTGTCTC CTATAACAGAAAATGGCATTCTTCCAGTTTTTACGGCTGTTCTACCGTTC CGAGGCCCTTCTAAAGGAGGAAACGAGGTCATTGTGACTGGTGAGAATTT GGCCGAAGGTGCAGTTGCGGTTTTCGGGGATAAGAAGTGTACAAGTGTGT CGTCAGTGTCATCGGACAAGAGGAGCTTTAAGTGCAAGGTACCGCCTGGA AGCCCAGGCCAACGAGTATCAATATCACTTCAGTTTTCCGATAGCACGCT CAATGTTGGGGCCGGTAGCGGTGTAGACTATGTATACATGAACGTATGA back to topprotein sequence of Ggra3987.t1 >Ggra3987.t1 ID=Ggra3987.t1|Name=Ggra3987.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=883bp
MKRSAKICWIGFVISTIVIAAVAGLVLYFTAFKDELAGPFTELQPDPQSG TSLVDHLAHAVPGFEYREVDFNGDGVESVQLDGSRSHTHFFDAGPPIIEG KLVEMIWFNKETGDRLGTGPRPIAEFPVGKTTVGLTVTDNHDDSHTDYAT VIIDKPIDPGAYCYYYEKSSSSTISLADKLADGERPVFASKVSDIDFASV SDFHASQTSKQFQMRCNFLVKGGKTTKFSITHVGPVRLLVADELVLESDA TDERSTSSSYEIPSGTHTVQLLYSRSSTSDAKLQLTAEGQKLQCDLSDIL PVLTAVDPRSSQLSAGGTATIYGVGLFNGVEIRFGEKNIDILVDQSTETE VLVTVPESSESGVVYITASNRVGTSNGLAFQYSSSALPPIRFSESRVRDG SKPIVLNLITGIKYGPDHRYYASAINSVVHSFSAGYDMKASDLCTSPSLG KHRAILGLAFNPADTDVKLYVSASVLDWKKSGKLNTPRGWANGHILLLKK DVDGKCLDKVGDPVITGLPVSNHDHGVNGLVFDNDGKLHIQIGGFTNAGL NDASSRLGGFDENPLSGASLVADVNKPGFNGNVEYDANNPAKANQVGGDV MVYSPGWRNSFGINIHSNGFLYATDNGASAGFGDMSVSCTASTKYVGKNL DDKLGKVIEGKYAGHPNRNRGKKDPRECKFMDSKEKSNGFYQKPIATFES STNGVMEYTANSFKGQLKGDIMCSKYTTESSPGKMFRVQLDDNGNLKKGP DELWLSSGLSIEMSPYGQILMPRVYKKEVIVLSPITENGILPVFTAVLPF RGPSKGGNEVIVTGENLAEGAVAVFGDKKCTSVSSVSSDKRSFKCKVPPG SPGQRVSISLQFSDSTLNVGAGSGVDYVYMNV* back to topmRNA from alignment at tig00000908_pilon:291310..293958- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra3987.t1 ID=Ggra3987.t1|Name=Ggra3987.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2649bp|location=Sequence derived from alignment at tig00000908_pilon:291310..293958- (Gracilaria gracilis GNS1m male) ATGAAGCGTTCGGCCAAGATTTGTTGGATTGGCTTTGTCATCTCCACCAT
TGTCATAGCCGCTGTTGCTGGACTTGTCTTGTATTTCACCGCCTTCAAGG
ATGAACTGGCTGGCCCTTTCACCGAGTTGCAGCCGGACCCCCAGTCGGGT
ACTTCGCTCGTCGACCATCTTGCGCACGCAGTGCCCGGCTTCGAATACCG
CGAGGTCGATTTCAATGGCGATGGCGTAGAATCCGTGCAGCTTGACGGCT
CACGCTCTCACACCCATTTCTTCGATGCGGGACCGCCTATCATCGAAGGC
AAGCTCGTCGAGATGATTTGGTTCAATAAGGAGACTGGCGATCGACTTGG
CACAGGTCCGAGACCCATTGCTGAATTTCCCGTCGGAAAGACTACTGTTG
GGCTCACTGTAACTGACAACCACGATGATTCTCACACCGATTATGCCACT
GTCATTATTGACAAACCTATTGATCCCGGCGCCTATTGCTATTACTACGA
AAAATCTTCCTCTTCCACAATTTCGCTTGCCGATAAGCTTGCTGATGGTG
AGCGTCCCGTCTTCGCTTCCAAGGTGTCCGACATTGATTTTGCTTCCGTC
TCCGACTTCCATGCCTCCCAAACATCCAAACAGTTTCAAATGCGCTGCAA
CTTCCTCGTCAAGGGAGGAAAGACAACCAAGTTTTCCATCACTCATGTTG
GACCTGTGCGTCTCCTCGTTGCCGATGAGCTTGTTCTAGAATCCGATGCA
ACCGATGAAAGATCTACCTCCTCCTCCTACGAAATTCCATCCGGCACACA
TACCGTACAACTTCTCTACTCACGCTCATCAACATCTGACGCTAAACTAC
AGCTTACTGCCGAGGGACAAAAGCTCCAGTGCGACTTGTCCGACATCCTT
CCTGTCTTAACCGCCGTTGACCCTCGCTCATCGCAGCTTTCCGCCGGAGG
TACTGCTACGATATATGGCGTGGGCCTGTTTAATGGCGTAGAGATTCGTT
TCGGGGAGAAGAATATTGACATTCTTGTCGACCAATCTACCGAAACTGAG
GTGCTTGTTACCGTACCTGAGTCCTCAGAGTCCGGCGTTGTTTACATTAC
TGCATCCAACAGGGTGGGCACCTCCAACGGTTTAGCATTCCAATATTCGA
GTTCTGCGTTGCCTCCCATTCGGTTTAGCGAATCTCGCGTGCGTGACGGT
TCGAAGCCCATAGTGCTCAATCTGATTACCGGAATCAAGTACGGTCCAGA
CCACAGATACTATGCTTCGGCCATCAACAGCGTTGTTCACTCATTTTCCG
CGGGTTATGATATGAAGGCCAGTGATCTTTGTACGTCACCTTCTCTGGGG
AAGCATCGCGCAATACTTGGCTTGGCTTTCAATCCAGCGGATACTGACGT
GAAGTTATATGTATCTGCTTCTGTTCTGGATTGGAAGAAGAGCGGCAAGT
TGAACACACCACGTGGCTGGGCTAACGGTCACATTTTGCTCCTCAAGAAG
GATGTTGACGGCAAGTGCCTGGACAAAGTTGGCGACCCCGTTATTACCGG
GCTTCCCGTATCAAACCATGACCACGGCGTGAATGGTTTGGTTTTCGACA
ATGATGGAAAGCTACACATACAAATTGGTGGGTTCACCAATGCTGGTCTG
AATGACGCGAGCTCTAGACTGGGTGGATTTGACGAGAATCCGCTTAGTGG
TGCTAGTTTAGTGGCAGATGTGAACAAGCCTGGTTTCAACGGCAATGTGG
AGTATGATGCGAACAATCCAGCTAAAGCGAATCAAGTCGGTGGGGACGTC
ATGGTTTACTCCCCAGGATGGCGAAATTCATTTGGTATCAACATTCATTC
GAACGGGTTTTTGTATGCCACCGACAATGGTGCTTCGGCTGGGTTTGGAG
ATATGTCTGTTTCATGTACTGCTTCTACCAAGTACGTTGGAAAGAATCTG
GACGATAAGCTTGGAAAGGTTATAGAAGGCAAGTATGCAGGTCATCCAAA
CCGCAACAGGGGTAAAAAGGATCCGAGAGAATGTAAGTTCATGGACTCAA
AGGAAAAGTCAAATGGGTTCTATCAGAAACCAATCGCTACATTTGAGTCA
TCCACTAATGGTGTTATGGAGTACACAGCAAACAGCTTCAAAGGACAGCT
CAAGGGAGATATCATGTGTTCCAAGTATACTACCGAGAGCTCGCCAGGGA
AAATGTTCCGAGTGCAACTGGATGACAACGGAAACCTGAAGAAGGGGCCC
GATGAGTTATGGTTGTCCAGTGGGCTGTCCATTGAGATGTCTCCTTACGG
CCAAATTCTTATGCCCCGAGTTTACAAAAAGGAAGTCATTGTTCTGTCTC
CTATAACAGAAAATGGCATTCTTCCAGTTTTTACGGCTGTTCTACCGTTC
CGAGGCCCTTCTAAAGGAGGAAACGAGGTCATTGTGACTGGTGAGAATTT
GGCCGAAGGTGCAGTTGCGGTTTTCGGGGATAAGAAGTGTACAAGTGTGT
CGTCAGTGTCATCGGACAAGAGGAGCTTTAAGTGCAAGGTACCGCCTGGA
AGCCCAGGCCAACGAGTATCAATATCACTTCAGTTTTCCGATAGCACGCT
CAATGTTGGGGCCGGTAGCGGTGTAGACTATGTATACATGAACGTATGA back to topCoding sequence (CDS) from alignment at tig00000908_pilon:291310..293958- >Ggra3987.t1 ID=Ggra3987.t1|Name=Ggra3987.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2649bp|location=Sequence derived from alignment at tig00000908_pilon:291310..293958- (Gracilaria gracilis GNS1m male) ATGAAGCGTTCGGCCAAGATTTGTTGGATTGGCTTTGTCATCTCCACCAT TGTCATAGCCGCTGTTGCTGGACTTGTCTTGTATTTCACCGCCTTCAAGG ATGAACTGGCTGGCCCTTTCACCGAGTTGCAGCCGGACCCCCAGTCGGGT ACTTCGCTCGTCGACCATCTTGCGCACGCAGTGCCCGGCTTCGAATACCG CGAGGTCGATTTCAATGGCGATGGCGTAGAATCCGTGCAGCTTGACGGCT CACGCTCTCACACCCATTTCTTCGATGCGGGACCGCCTATCATCGAAGGC AAGCTCGTCGAGATGATTTGGTTCAATAAGGAGACTGGCGATCGACTTGG CACAGGTCCGAGACCCATTGCTGAATTTCCCGTCGGAAAGACTACTGTTG GGCTCACTGTAACTGACAACCACGATGATTCTCACACCGATTATGCCACT GTCATTATTGACAAACCTATTGATCCCGGCGCCTATTGCTATTACTACGA AAAATCTTCCTCTTCCACAATTTCGCTTGCCGATAAGCTTGCTGATGGTG AGCGTCCCGTCTTCGCTTCCAAGGTGTCCGACATTGATTTTGCTTCCGTC TCCGACTTCCATGCCTCCCAAACATCCAAACAGTTTCAAATGCGCTGCAA CTTCCTCGTCAAGGGAGGAAAGACAACCAAGTTTTCCATCACTCATGTTG GACCTGTGCGTCTCCTCGTTGCCGATGAGCTTGTTCTAGAATCCGATGCA ACCGATGAAAGATCTACCTCCTCCTCCTACGAAATTCCATCCGGCACACA TACCGTACAACTTCTCTACTCACGCTCATCAACATCTGACGCTAAACTAC AGCTTACTGCCGAGGGACAAAAGCTCCAGTGCGACTTGTCCGACATCCTT CCTGTCTTAACCGCCGTTGACCCTCGCTCATCGCAGCTTTCCGCCGGAGG TACTGCTACGATATATGGCGTGGGCCTGTTTAATGGCGTAGAGATTCGTT TCGGGGAGAAGAATATTGACATTCTTGTCGACCAATCTACCGAAACTGAG GTGCTTGTTACCGTACCTGAGTCCTCAGAGTCCGGCGTTGTTTACATTAC TGCATCCAACAGGGTGGGCACCTCCAACGGTTTAGCATTCCAATATTCGA GTTCTGCGTTGCCTCCCATTCGGTTTAGCGAATCTCGCGTGCGTGACGGT TCGAAGCCCATAGTGCTCAATCTGATTACCGGAATCAAGTACGGTCCAGA CCACAGATACTATGCTTCGGCCATCAACAGCGTTGTTCACTCATTTTCCG CGGGTTATGATATGAAGGCCAGTGATCTTTGTACGTCACCTTCTCTGGGG AAGCATCGCGCAATACTTGGCTTGGCTTTCAATCCAGCGGATACTGACGT GAAGTTATATGTATCTGCTTCTGTTCTGGATTGGAAGAAGAGCGGCAAGT TGAACACACCACGTGGCTGGGCTAACGGTCACATTTTGCTCCTCAAGAAG GATGTTGACGGCAAGTGCCTGGACAAAGTTGGCGACCCCGTTATTACCGG GCTTCCCGTATCAAACCATGACCACGGCGTGAATGGTTTGGTTTTCGACA ATGATGGAAAGCTACACATACAAATTGGTGGGTTCACCAATGCTGGTCTG AATGACGCGAGCTCTAGACTGGGTGGATTTGACGAGAATCCGCTTAGTGG TGCTAGTTTAGTGGCAGATGTGAACAAGCCTGGTTTCAACGGCAATGTGG AGTATGATGCGAACAATCCAGCTAAAGCGAATCAAGTCGGTGGGGACGTC ATGGTTTACTCCCCAGGATGGCGAAATTCATTTGGTATCAACATTCATTC GAACGGGTTTTTGTATGCCACCGACAATGGTGCTTCGGCTGGGTTTGGAG ATATGTCTGTTTCATGTACTGCTTCTACCAAGTACGTTGGAAAGAATCTG GACGATAAGCTTGGAAAGGTTATAGAAGGCAAGTATGCAGGTCATCCAAA CCGCAACAGGGGTAAAAAGGATCCGAGAGAATGTAAGTTCATGGACTCAA AGGAAAAGTCAAATGGGTTCTATCAGAAACCAATCGCTACATTTGAGTCA TCCACTAATGGTGTTATGGAGTACACAGCAAACAGCTTCAAAGGACAGCT CAAGGGAGATATCATGTGTTCCAAGTATACTACCGAGAGCTCGCCAGGGA AAATGTTCCGAGTGCAACTGGATGACAACGGAAACCTGAAGAAGGGGCCC GATGAGTTATGGTTGTCCAGTGGGCTGTCCATTGAGATGTCTCCTTACGG CCAAATTCTTATGCCCCGAGTTTACAAAAAGGAAGTCATTGTTCTGTCTC CTATAACAGAAAATGGCATTCTTCCAGTTTTTACGGCTGTTCTACCGTTC CGAGGCCCTTCTAAAGGAGGAAACGAGGTCATTGTGACTGGTGAGAATTT GGCCGAAGGTGCAGTTGCGGTTTTCGGGGATAAGAAGTGTACAAGTGTGT CGTCAGTGTCATCGGACAAGAGGAGCTTTAAGTGCAAGGTACCGCCTGGA AGCCCAGGCCAACGAGTATCAATATCACTTCAGTTTTCCGATAGCACGCT CAATGTTGGGGCCGGTAGCGGTGTAGACTATGTATACATGAACGTATGA back to top
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