Ggra3929.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3929.t1
Unique NameGgra3929.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:138236..139327 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3929Ggra3929Gracilaria gracilis GNS1m malegenetig00000908_pilon 138236..139327 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3929.t1.start1Ggra3929.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 138236..138238 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3929.t1.CDS1Ggra3929.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 138236..139327 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3929.t1.exon1Ggra3929.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 138236..139327 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3929.t1.stop1Ggra3929.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 139325..139327 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3929.t1Ggra3929.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 138236..139327 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3929.t1 ID=Ggra3929.t1|Name=Ggra3929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=364bp
MDVTQHTRFLANPIALAASAELRANAAANASRIRELETILHSKRRELARL
HSTKRLRATSITPPPSACITPLTSSPRTIDYVKNTPREMAARGSHWSFAE
KARFEAALHRYGPFAWDHIIRAVATRSDKQVKAYAARYRRRKKLAAKAQQ
EAVRAFAAAQLNAAAAAAAAAAANHSLTMYGRAPRRELPKSEHRLAPIMP
ADFRSSPGVHVRSPDVTPFSSSLSAFGGADADSGAECAPPSPPSPPPVRA
AAGACEQACGAALMSDADDGTDADAEAEACATEPSVVESSSNADTDDALF
ADAHMGGDGLVRMMRAASEEMTRDHAERQVSLECTLLRDSDDWTLADSLS
GELLHDALLAAPL*
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spliced messenger RNA

>Ggra3929.t1 ID=Ggra3929.t1|Name=Ggra3929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1092bp|location=Sequence derived from alignment at tig00000908_pilon:138236..139327+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGTCACGCAGCACACGCGCTTCTTGGCCAACCCGATTGCGCTCGC
CGCGTCCGCCGAGCTGCGCGCCAATGCCGCCGCAAACGCATCGCGCATCC
GCGAGCTCGAGACCATTCTGCACTCCAAGCGCCGCGAGCTGGCGCGCCTG
CACAGCACAAAGCGGCTGCGCGCCACCTCCATCACGCCGCCGCCCAGCGC
GTGCATCACGCCGCTCACGTCGTCGCCGCGCACCATCGACTACGTCAAGA
ACACGCCGCGCGAAATGGCCGCGCGCGGCTCGCACTGGAGCTTTGCCGAG
AAGGCGCGCTTCGAGGCGGCGCTGCACCGCTACGGCCCCTTTGCGTGGGA
TCACATCATCCGCGCCGTCGCCACGCGCTCCGACAAGCAGGTCAAGGCGT
ACGCCGCGCGCTACCGGCGCAGGAAGAAGCTGGCCGCCAAGGCGCAGCAA
GAGGCCGTGCGCGCGTTTgcggccgcgcagctcaacgccgccgcagccgc
tgccgccgctgccgctgcAAACCACTCGCTCACCATGTATGGACGCGCGC
CCCGCCGCGAGCTGCCCAAGTCGGAGCACCGGCTGGCGCCAATCATGCCG
GCCGATTTTCGCTCCTCTCCCGGCGTGCACGTGCGCTCGCCGGACGTGAC
GCCGTTCTCGAGCAGCCTGTCCGCCTTTGGCGGCGCCGACGCCGACTCAG
GCGCCGAGTGCGCGCCGCCGTCGCCGCCGTCGCCGCCGCCAGTGAGGGCC
GCGGCGGGCGCGTGCGAGCAGGCGTGCGGCGCGGCGCTGATGAGCGACGC
GGACGACGGCACGGACGCGGACGCGGAGGCGGAGGCGTGCGCCACGGAGC
CCAGCGTGGTGGAGAGCAGCAGCAACGCCGACACCGACGACGCGCTGTTC
GCCGACGCGCACATGGGCGGCGACGGGCTGGTGCGTATGATGCGCGCGGC
GTCGGAGGAGATGACGCGCGACCACGCCGAGCGACAGGTGTCGTTGGAAT
GTACGCTGCTGCGCGACAGCGACGATTGGACGCTTGCTGACAGTTTGAGC
GGCGAGTTGCTGCACGACGCGCTACTGGCGGCGCCGCTGTGA
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protein sequence of Ggra3929.t1

>Ggra3929.t1 ID=Ggra3929.t1|Name=Ggra3929.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MDVTQHTRFLANPIALAASAELRANAAANASRIRELETILHSKRRELARL
HSTKRLRATSITPPPSACITPLTSSPRTIDYVKNTPREMAARGSHWSFAE
KARFEAALHRYGPFAWDHIIRAVATRSDKQVKAYAARYRRRKKLAAKAQQ
EAVRAFAAAQLNAAAAAAAAAAANHSLTMYGRAPRRELPKSEHRLAPIMP
ADFRSSPGVHVRSPDVTPFSSSLSAFGGADADSGAECAPPSPPSPPPVRA
AAGACEQACGAALMSDADDGTDADAEAEACATEPSVVESSSNADTDDALF
ADAHMGGDGLVRMMRAASEEMTRDHAERQVSLECTLLRDSDDWTLADSLS
GELLHDALLAAPL*
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mRNA from alignment at tig00000908_pilon:138236..139327+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3929.t1 ID=Ggra3929.t1|Name=Ggra3929.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1092bp|location=Sequence derived from alignment at tig00000908_pilon:138236..139327+ (Gracilaria gracilis GNS1m male)
ATGGACGTCACGCAGCACACGCGCTTCTTGGCCAACCCGATTGCGCTCGC
CGCGTCCGCCGAGCTGCGCGCCAATGCCGCCGCAAACGCATCGCGCATCC
GCGAGCTCGAGACCATTCTGCACTCCAAGCGCCGCGAGCTGGCGCGCCTG
CACAGCACAAAGCGGCTGCGCGCCACCTCCATCACGCCGCCGCCCAGCGC
GTGCATCACGCCGCTCACGTCGTCGCCGCGCACCATCGACTACGTCAAGA
ACACGCCGCGCGAAATGGCCGCGCGCGGCTCGCACTGGAGCTTTGCCGAG
AAGGCGCGCTTCGAGGCGGCGCTGCACCGCTACGGCCCCTTTGCGTGGGA
TCACATCATCCGCGCCGTCGCCACGCGCTCCGACAAGCAGGTCAAGGCGT
ACGCCGCGCGCTACCGGCGCAGGAAGAAGCTGGCCGCCAAGGCGCAGCAA
GAGGCCGTGCGCGCGTTTgcggccgcgcagctcaacgccgccgcagccgc
tgccgccgctgccgctgcAAACCACTCGCTCACCATGTATGGACGCGCGC
CCCGCCGCGAGCTGCCCAAGTCGGAGCACCGGCTGGCGCCAATCATGCCG
GCCGATTTTCGCTCCTCTCCCGGCGTGCACGTGCGCTCGCCGGACGTGAC
GCCGTTCTCGAGCAGCCTGTCCGCCTTTGGCGGCGCCGACGCCGACTCAG
GCGCCGAGTGCGCGCCGCCGTCGCCGCCGTCGCCGCCGCCAGTGAGGGCC
GCGGCGGGCGCGTGCGAGCAGGCGTGCGGCGCGGCGCTGATGAGCGACGC
GGACGACGGCACGGACGCGGACGCGGAGGCGGAGGCGTGCGCCACGGAGC
CCAGCGTGGTGGAGAGCAGCAGCAACGCCGACACCGACGACGCGCTGTTC
GCCGACGCGCACATGGGCGGCGACGGGCTGGTGCGTATGATGCGCGCGGC
GTCGGAGGAGATGACGCGCGACCACGCCGAGCGACAGGTGTCGTTGGAAT
GTACGCTGCTGCGCGACAGCGACGATTGGACGCTTGCTGACAGTTTGAGC
GGCGAGTTGCTGCACGACGCGCTACTGGCGGCGCCGCTGTGA
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Coding sequence (CDS) from alignment at tig00000908_pilon:138236..139327+

>Ggra3929.t1 ID=Ggra3929.t1|Name=Ggra3929.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1092bp|location=Sequence derived from alignment at tig00000908_pilon:138236..139327+ (Gracilaria gracilis GNS1m male)
ATGGACGTCACGCAGCACACGCGCTTCTTGGCCAACCCGATTGCGCTCGC
CGCGTCCGCCGAGCTGCGCGCCAATGCCGCCGCAAACGCATCGCGCATCC
GCGAGCTCGAGACCATTCTGCACTCCAAGCGCCGCGAGCTGGCGCGCCTG
CACAGCACAAAGCGGCTGCGCGCCACCTCCATCACGCCGCCGCCCAGCGC
GTGCATCACGCCGCTCACGTCGTCGCCGCGCACCATCGACTACGTCAAGA
ACACGCCGCGCGAAATGGCCGCGCGCGGCTCGCACTGGAGCTTTGCCGAG
AAGGCGCGCTTCGAGGCGGCGCTGCACCGCTACGGCCCCTTTGCGTGGGA
TCACATCATCCGCGCCGTCGCCACGCGCTCCGACAAGCAGGTCAAGGCGT
ACGCCGCGCGCTACCGGCGCAGGAAGAAGCTGGCCGCCAAGGCGCAGCAA
GAGGCCGTGCGCGCGTTTgcggccgcgcagctcaacgccgccgcagccgc
tgccgccgctgccgctgcAAACCACTCGCTCACCATGTATGGACGCGCGC
CCCGCCGCGAGCTGCCCAAGTCGGAGCACCGGCTGGCGCCAATCATGCCG
GCCGATTTTCGCTCCTCTCCCGGCGTGCACGTGCGCTCGCCGGACGTGAC
GCCGTTCTCGAGCAGCCTGTCCGCCTTTGGCGGCGCCGACGCCGACTCAG
GCGCCGAGTGCGCGCCGCCGTCGCCGCCGTCGCCGCCGCCAGTGAGGGCC
GCGGCGGGCGCGTGCGAGCAGGCGTGCGGCGCGGCGCTGATGAGCGACGC
GGACGACGGCACGGACGCGGACGCGGAGGCGGAGGCGTGCGCCACGGAGC
CCAGCGTGGTGGAGAGCAGCAGCAACGCCGACACCGACGACGCGCTGTTC
GCCGACGCGCACATGGGCGGCGACGGGCTGGTGCGTATGATGCGCGCGGC
GTCGGAGGAGATGACGCGCGACCACGCCGAGCGACAGGTGTCGTTGGAAT
GTACGCTGCTGCGCGACAGCGACGATTGGACGCTTGCTGACAGTTTGAGC
GGCGAGTTGCTGCACGACGCGCTACTGGCGGCGCCGCTGTGA
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