Ggra3922.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3922.t1
Unique NameGgra3922.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:104153..104785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3922Ggra3922Gracilaria gracilis GNS1m malegenetig00000908_pilon 104153..104785 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3922.t1.start1Ggra3922.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 104153..104155 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3922.t1.CDS1Ggra3922.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 104153..104785 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3922.t1.exon1Ggra3922.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 104153..104785 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3922.t1.stop1Ggra3922.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 104783..104785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3922.t1Ggra3922.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 104153..104785 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3922.t1 ID=Ggra3922.t1|Name=Ggra3922.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=211bp
MYGMRSESIRVRRARSPIYTGSPTTRENLTAMLQHNLVTARVVAFETSPM
RILTRHAYKNALVATRRLTGDIHAMSKAARSNWQKRTLGEIEKLLKQCRM
HAMIKSASVSVAQDVFVLLSQYLGTCAVPDKIVIRQLAADVPVNAPSAKR
LNRAPSNVSWFRRSVSHKQVIQTSLSTNSLPPNSLAHTRASCASLPNVYS
NPNLFKSVEN*
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spliced messenger RNA

>Ggra3922.t1 ID=Ggra3922.t1|Name=Ggra3922.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000908_pilon:104153..104785+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTATGGCATGCGGTCCGAGTCTATTCGCGTGCGACGCGCCCGCTCTCC
GATTTACACCGGGTCGCCCACTACGCGCGAGAATCTCACCGCGATGCTGC
AGCACAACCTGGTCACCGCTCGAGTGGTGGCGTTCGAGACGTCTCCCATG
CGAATTTTGACGCGCCATGCGTACAAGAACGCGCTGGTCGCCACGAGACG
GCTCACTGGCGATATTCACGCCATGAGCAAGGCAGCGCGCTCCAACTGGC
AGAAACGCACTCTTGGTGAGATAGAAAAGTTGTTGAAGCAGTGTCGCATG
CATGCCATGATCAAGTCGGCTTCGGTGAGCGTGGCGCAGGATGTGTTTGT
TCTGCTATCGCAGTATCTTGGAACCTGTGCTGTGCCCGATAAGATTGTGA
TTCGACAACTTGCGGCCGATGTGCCGGTGAATGCGCCGTCTGCCAAGCGT
TTGAATCGAGCGCCGAGTAACGTGTCTTGGTTCCGTCGATCAGTATCGCA
CAAACAGGTGATTCAAACAAGTCTTTCTACAAACTCACTGCCGCCTAATA
GCTTGGCACACACACGCGCGTCGTGCGCGTCGCTACCGAATGTATATTCC
AATCCAAACCTATTCAAAAGCGTGGAGAACTAG
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protein sequence of Ggra3922.t1

>Ggra3922.t1 ID=Ggra3922.t1|Name=Ggra3922.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MYGMRSESIRVRRARSPIYTGSPTTRENLTAMLQHNLVTARVVAFETSPM
RILTRHAYKNALVATRRLTGDIHAMSKAARSNWQKRTLGEIEKLLKQCRM
HAMIKSASVSVAQDVFVLLSQYLGTCAVPDKIVIRQLAADVPVNAPSAKR
LNRAPSNVSWFRRSVSHKQVIQTSLSTNSLPPNSLAHTRASCASLPNVYS
NPNLFKSVEN*
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mRNA from alignment at tig00000908_pilon:104153..104785+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3922.t1 ID=Ggra3922.t1|Name=Ggra3922.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000908_pilon:104153..104785+ (Gracilaria gracilis GNS1m male)
ATGTATGGCATGCGGTCCGAGTCTATTCGCGTGCGACGCGCCCGCTCTCC
GATTTACACCGGGTCGCCCACTACGCGCGAGAATCTCACCGCGATGCTGC
AGCACAACCTGGTCACCGCTCGAGTGGTGGCGTTCGAGACGTCTCCCATG
CGAATTTTGACGCGCCATGCGTACAAGAACGCGCTGGTCGCCACGAGACG
GCTCACTGGCGATATTCACGCCATGAGCAAGGCAGCGCGCTCCAACTGGC
AGAAACGCACTCTTGGTGAGATAGAAAAGTTGTTGAAGCAGTGTCGCATG
CATGCCATGATCAAGTCGGCTTCGGTGAGCGTGGCGCAGGATGTGTTTGT
TCTGCTATCGCAGTATCTTGGAACCTGTGCTGTGCCCGATAAGATTGTGA
TTCGACAACTTGCGGCCGATGTGCCGGTGAATGCGCCGTCTGCCAAGCGT
TTGAATCGAGCGCCGAGTAACGTGTCTTGGTTCCGTCGATCAGTATCGCA
CAAACAGGTGATTCAAACAAGTCTTTCTACAAACTCACTGCCGCCTAATA
GCTTGGCACACACACGCGCGTCGTGCGCGTCGCTACCGAATGTATATTCC
AATCCAAACCTATTCAAAAGCGTGGAGAACTAG
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Coding sequence (CDS) from alignment at tig00000908_pilon:104153..104785+

>Ggra3922.t1 ID=Ggra3922.t1|Name=Ggra3922.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=633bp|location=Sequence derived from alignment at tig00000908_pilon:104153..104785+ (Gracilaria gracilis GNS1m male)
ATGTATGGCATGCGGTCCGAGTCTATTCGCGTGCGACGCGCCCGCTCTCC
GATTTACACCGGGTCGCCCACTACGCGCGAGAATCTCACCGCGATGCTGC
AGCACAACCTGGTCACCGCTCGAGTGGTGGCGTTCGAGACGTCTCCCATG
CGAATTTTGACGCGCCATGCGTACAAGAACGCGCTGGTCGCCACGAGACG
GCTCACTGGCGATATTCACGCCATGAGCAAGGCAGCGCGCTCCAACTGGC
AGAAACGCACTCTTGGTGAGATAGAAAAGTTGTTGAAGCAGTGTCGCATG
CATGCCATGATCAAGTCGGCTTCGGTGAGCGTGGCGCAGGATGTGTTTGT
TCTGCTATCGCAGTATCTTGGAACCTGTGCTGTGCCCGATAAGATTGTGA
TTCGACAACTTGCGGCCGATGTGCCGGTGAATGCGCCGTCTGCCAAGCGT
TTGAATCGAGCGCCGAGTAACGTGTCTTGGTTCCGTCGATCAGTATCGCA
CAAACAGGTGATTCAAACAAGTCTTTCTACAAACTCACTGCCGCCTAATA
GCTTGGCACACACACGCGCGTCGTGCGCGTCGCTACCGAATGTATATTCC
AATCCAAACCTATTCAAAAGCGTGGAGAACTAG
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