Ggra3873.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3873.t1
Unique NameGgra3873.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length373
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2289268..2290386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3873Ggra3873Gracilaria gracilis GNS1m malegenetig00000850_pilon 2289268..2290386 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3873.t1.stop1Ggra3873.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 2289268..2289270 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3873.t1.CDS1Ggra3873.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 2289268..2290386 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3873.t1.exon1Ggra3873.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 2289268..2290386 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3873.t1.start1Ggra3873.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 2290384..2290386 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3873.t1Ggra3873.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 2289268..2290386 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3873.t1 ID=Ggra3873.t1|Name=Ggra3873.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=373bp
MRRLRAPWRRRCASRAERESCSPSSASGADARHSQLAATLSAATADNSRL
RQQLATQRDASAETIAALRDQHAALHATLAAQKRRAAALAADNRALSDAV
KRERRADARDAVRAADAADAADAAAAAGTGRRRRQSSSVEAAHIRSELKQ
LQAELATVTSDRAALRRVIAHQRQRIDRLDASRAAADDALATVRAGFCDV
VERVHQLLYAIRPDSRATLSKNGVAQRLSDVCSRIQALVQCVDAFHELFG
RDSERATHCDPSVLQGAKQQPLFTPVREHVLEHARLSEHSVPPPPPRDKS
DPTPRRANGAHRRAARLAHHRAREYGMAHLMDERLVPSADEIMPLDDAIP
PRFVPRATRTRSLPFSNLRKPT*
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spliced messenger RNA

>Ggra3873.t1 ID=Ggra3873.t1|Name=Ggra3873.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000850_pilon:2289268..2290386- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCGGCTGCGCGCGCCATGGCGACGGCGCTGCGCGTCGCGCGCGGA
GCGAGAGTCGTGCTCGCCCTCGAGTGCCAGCGGCGCCGACGCGCGCCACT
CGCAGCTGGCGGCCACTCTGTCGGCCGCCACGGCCGACAACAGCCGCCTG
CGTCAGCAGCTGGCCACGCAGCGCGACGCCAGCGCCGAGACCATCGCCGC
GCTGCGCGACCAGCACGCCGCGCTGCACGCCACCCTGGCCGCGCAGAAAC
GCCGCGCCGCCGCGCTGGCCGCCGACAACCGCGCCCTGAGCGACGCCGTC
AAGCGCGAGCGCCGCGCCGACGCGCGCGACGCCGTGCGCGCCGCCGACGC
CGCCGACGCCGCCGACGCCGCCGCCGCTGCGGGCACGGGCAGGCGCAGGC
GCCAGTCGTCGTCGGTGGAGGCGGCGCATATTCGCTCCGAGTTGAAGCAG
CTGCAGGCGGAGTTGGCCACTGTGACCAGCGATCGTGCCGCGTTGCGCCG
CGTGATTGCGCACCAGCGCCAGCGAATTGATCGCCTTGACGCGTCGCGCG
CAGCCGCAGATGACGCCTTGGCCACCGTCAGGGCGGGCTTCTGCGACGTG
GTGGAGAGGGTGCACCAGTTGTTGTACGCCATTCGCCCGGATTCACGCGC
CACATTGTCGAAGAACGGCGTGGCGCAACGGCTGTCGGACGTGTGCTCGC
GCATTCAGGCGTTGGTGCAATGCGTGGACGCCTTCCACGAGCTGTTTGGC
CGCGACAGTGAGCGCGCCACCCATTGCGATCCCTCCGTGTTGCAGGGCGC
CAAGCAGCAGCCGCTGTTCACCCCCGTTAGGGAACACGTGTTGGAGCATG
CTCGCCTGTCGGAACACTCCGTGCCGCCGCCGCCGCCGCGTGATAAGAGT
GACCCCACGCCGCGTCGTGCCAATGGCGCCCACCGTCGTGCCGCCCGTCT
TGCGCACCATCGCGCGAGGGAGTATGGTATGGCGCACTTGATGGATGAGC
GATTGGTGCCTTCTGCTGATGAGATTATGCCCTTGGATGACGCCATTCCG
CCGCGCTTTGTGCCGCGTGCTACCCGCACCAGGTCGCTGCCTTTCTCTAA
CCTCAGGAAGCCCACCTAG
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protein sequence of Ggra3873.t1

>Ggra3873.t1 ID=Ggra3873.t1|Name=Ggra3873.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=373bp
MRRLRAPWRRRCASRAERESCSPSSASGADARHSQLAATLSAATADNSRL
RQQLATQRDASAETIAALRDQHAALHATLAAQKRRAAALAADNRALSDAV
KRERRADARDAVRAADAADAADAAAAAGTGRRRRQSSSVEAAHIRSELKQ
LQAELATVTSDRAALRRVIAHQRQRIDRLDASRAAADDALATVRAGFCDV
VERVHQLLYAIRPDSRATLSKNGVAQRLSDVCSRIQALVQCVDAFHELFG
RDSERATHCDPSVLQGAKQQPLFTPVREHVLEHARLSEHSVPPPPPRDKS
DPTPRRANGAHRRAARLAHHRAREYGMAHLMDERLVPSADEIMPLDDAIP
PRFVPRATRTRSLPFSNLRKPT*
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mRNA from alignment at tig00000850_pilon:2289268..2290386-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3873.t1 ID=Ggra3873.t1|Name=Ggra3873.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000850_pilon:2289268..2290386- (Gracilaria gracilis GNS1m male)
ATGCGCCGGCTGCGCGCGCCATGGCGACGGCGCTGCGCGTCGCGCGCGGA
GCGAGAGTCGTGCTCGCCCTCGAGTGCCAGCGGCGCCGACGCGCGCCACT
CGCAGCTGGCGGCCACTCTGTCGGCCGCCACGGCCGACAACAGCCGCCTG
CGTCAGCAGCTGGCCACGCAGCGCGACGCCAGCGCCGAGACCATCGCCGC
GCTGCGCGACCAGCACGCCGCGCTGCACGCCACCCTGGCCGCGCAGAAAC
GCCGCGCCGCCGCGCTGGCCGCCGACAACCGCGCCCTGAGCGACGCCGTC
AAGCGCGAGCGCCGCGCCGACGCGCGCGACGCCGTGCGCGCCGCCGACGC
CGCCGACGCCGCCGACGCCGCCGCCGCTGCGGGCACGGGCAGGCGCAGGC
GCCAGTCGTCGTCGGTGGAGGCGGCGCATATTCGCTCCGAGTTGAAGCAG
CTGCAGGCGGAGTTGGCCACTGTGACCAGCGATCGTGCCGCGTTGCGCCG
CGTGATTGCGCACCAGCGCCAGCGAATTGATCGCCTTGACGCGTCGCGCG
CAGCCGCAGATGACGCCTTGGCCACCGTCAGGGCGGGCTTCTGCGACGTG
GTGGAGAGGGTGCACCAGTTGTTGTACGCCATTCGCCCGGATTCACGCGC
CACATTGTCGAAGAACGGCGTGGCGCAACGGCTGTCGGACGTGTGCTCGC
GCATTCAGGCGTTGGTGCAATGCGTGGACGCCTTCCACGAGCTGTTTGGC
CGCGACAGTGAGCGCGCCACCCATTGCGATCCCTCCGTGTTGCAGGGCGC
CAAGCAGCAGCCGCTGTTCACCCCCGTTAGGGAACACGTGTTGGAGCATG
CTCGCCTGTCGGAACACTCCGTGCCGCCGCCGCCGCCGCGTGATAAGAGT
GACCCCACGCCGCGTCGTGCCAATGGCGCCCACCGTCGTGCCGCCCGTCT
TGCGCACCATCGCGCGAGGGAGTATGGTATGGCGCACTTGATGGATGAGC
GATTGGTGCCTTCTGCTGATGAGATTATGCCCTTGGATGACGCCATTCCG
CCGCGCTTTGTGCCGCGTGCTACCCGCACCAGGTCGCTGCCTTTCTCTAA
CCTCAGGAAGCCCACCTAG
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Coding sequence (CDS) from alignment at tig00000850_pilon:2289268..2290386-

>Ggra3873.t1 ID=Ggra3873.t1|Name=Ggra3873.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1119bp|location=Sequence derived from alignment at tig00000850_pilon:2289268..2290386- (Gracilaria gracilis GNS1m male)
ATGCGCCGGCTGCGCGCGCCATGGCGACGGCGCTGCGCGTCGCGCGCGGA
GCGAGAGTCGTGCTCGCCCTCGAGTGCCAGCGGCGCCGACGCGCGCCACT
CGCAGCTGGCGGCCACTCTGTCGGCCGCCACGGCCGACAACAGCCGCCTG
CGTCAGCAGCTGGCCACGCAGCGCGACGCCAGCGCCGAGACCATCGCCGC
GCTGCGCGACCAGCACGCCGCGCTGCACGCCACCCTGGCCGCGCAGAAAC
GCCGCGCCGCCGCGCTGGCCGCCGACAACCGCGCCCTGAGCGACGCCGTC
AAGCGCGAGCGCCGCGCCGACGCGCGCGACGCCGTGCGCGCCGCCGACGC
CGCCGACGCCGCCGACGCCGCCGCCGCTGCGGGCACGGGCAGGCGCAGGC
GCCAGTCGTCGTCGGTGGAGGCGGCGCATATTCGCTCCGAGTTGAAGCAG
CTGCAGGCGGAGTTGGCCACTGTGACCAGCGATCGTGCCGCGTTGCGCCG
CGTGATTGCGCACCAGCGCCAGCGAATTGATCGCCTTGACGCGTCGCGCG
CAGCCGCAGATGACGCCTTGGCCACCGTCAGGGCGGGCTTCTGCGACGTG
GTGGAGAGGGTGCACCAGTTGTTGTACGCCATTCGCCCGGATTCACGCGC
CACATTGTCGAAGAACGGCGTGGCGCAACGGCTGTCGGACGTGTGCTCGC
GCATTCAGGCGTTGGTGCAATGCGTGGACGCCTTCCACGAGCTGTTTGGC
CGCGACAGTGAGCGCGCCACCCATTGCGATCCCTCCGTGTTGCAGGGCGC
CAAGCAGCAGCCGCTGTTCACCCCCGTTAGGGAACACGTGTTGGAGCATG
CTCGCCTGTCGGAACACTCCGTGCCGCCGCCGCCGCCGCGTGATAAGAGT
GACCCCACGCCGCGTCGTGCCAATGGCGCCCACCGTCGTGCCGCCCGTCT
TGCGCACCATCGCGCGAGGGAGTATGGTATGGCGCACTTGATGGATGAGC
GATTGGTGCCTTCTGCTGATGAGATTATGCCCTTGGATGACGCCATTCCG
CCGCGCTTTGTGCCGCGTGCTACCCGCACCAGGTCGCTGCCTTTCTCTAA
CCTCAGGAAGCCCACCTAG
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