Ggra3869.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3869.t1
Unique NameGgra3869.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2281660..2282088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3869Ggra3869Gracilaria gracilis GNS1m malegenetig00000850_pilon 2281660..2282088 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3869.t1.stop1Ggra3869.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 2281660..2281662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3869.t1.CDS1Ggra3869.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 2281660..2282088 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3869.t1.exon1Ggra3869.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 2281660..2282088 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3869.t1.start1Ggra3869.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 2282086..2282088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3869.t1Ggra3869.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 2281660..2282088 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3869.t1 ID=Ggra3869.t1|Name=Ggra3869.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=143bp
MTSYRATTGLHQGNPIWHGTLQLHGNVTSFQTEAIAVPTTSAPRPDWGKV
LHLHARQCTPVADHRREVLATRFCFRLIAVDERGFPREEPRLDAIAAVME
EGKLLFRVRVENGWILVWGIHDERGNSSLLGGFYADGTLNPN*
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spliced messenger RNA

>Ggra3869.t1 ID=Ggra3869.t1|Name=Ggra3869.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=429bp|location=Sequence derived from alignment at tig00000850_pilon:2281660..2282088- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACATCGTACCGCGCTACCACCGGTCTGCACCAGGGCAACCCAATCTG
GCATGGAACGCTACAGCTTCACGGCAACGTAACGTCCTTTCAGACCGAGG
CCATCGCCGTGCCTACCACCTCTGCGCCGCGCCCGGACTGGGGAAAGGTT
CTACACCTTCATGCACGTCAATGCACGCCTGTCGCCGATCACCGCCGTGA
GGTTCTCGCCACCCGCTTTTGCTTCCGCTTGATCGCCGTCGATGAACGCG
GATTTCCGCGAGAAGAACCGAGACTGGACGCCATTGCGGCCGTCATGGAG
GAGGGAAAGTTGTTGTTCAGAGTTCGTGTTGAAAATGGATGGATTCTTGT
TTGGGGTATCCATGATGAGAGAGGAAATAGTTCTTTGCTGGGCGGCTTCT
ATGCCGACGGTACTCTAAATCCTAACTGA
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protein sequence of Ggra3869.t1

>Ggra3869.t1 ID=Ggra3869.t1|Name=Ggra3869.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MTSYRATTGLHQGNPIWHGTLQLHGNVTSFQTEAIAVPTTSAPRPDWGKV
LHLHARQCTPVADHRREVLATRFCFRLIAVDERGFPREEPRLDAIAAVME
EGKLLFRVRVENGWILVWGIHDERGNSSLLGGFYADGTLNPN*
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mRNA from alignment at tig00000850_pilon:2281660..2282088-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3869.t1 ID=Ggra3869.t1|Name=Ggra3869.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=429bp|location=Sequence derived from alignment at tig00000850_pilon:2281660..2282088- (Gracilaria gracilis GNS1m male)
ATGACATCGTACCGCGCTACCACCGGTCTGCACCAGGGCAACCCAATCTG
GCATGGAACGCTACAGCTTCACGGCAACGTAACGTCCTTTCAGACCGAGG
CCATCGCCGTGCCTACCACCTCTGCGCCGCGCCCGGACTGGGGAAAGGTT
CTACACCTTCATGCACGTCAATGCACGCCTGTCGCCGATCACCGCCGTGA
GGTTCTCGCCACCCGCTTTTGCTTCCGCTTGATCGCCGTCGATGAACGCG
GATTTCCGCGAGAAGAACCGAGACTGGACGCCATTGCGGCCGTCATGGAG
GAGGGAAAGTTGTTGTTCAGAGTTCGTGTTGAAAATGGATGGATTCTTGT
TTGGGGTATCCATGATGAGAGAGGAAATAGTTCTTTGCTGGGCGGCTTCT
ATGCCGACGGTACTCTAAATCCTAACTGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:2281660..2282088-

>Ggra3869.t1 ID=Ggra3869.t1|Name=Ggra3869.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=429bp|location=Sequence derived from alignment at tig00000850_pilon:2281660..2282088- (Gracilaria gracilis GNS1m male)
ATGACATCGTACCGCGCTACCACCGGTCTGCACCAGGGCAACCCAATCTG
GCATGGAACGCTACAGCTTCACGGCAACGTAACGTCCTTTCAGACCGAGG
CCATCGCCGTGCCTACCACCTCTGCGCCGCGCCCGGACTGGGGAAAGGTT
CTACACCTTCATGCACGTCAATGCACGCCTGTCGCCGATCACCGCCGTGA
GGTTCTCGCCACCCGCTTTTGCTTCCGCTTGATCGCCGTCGATGAACGCG
GATTTCCGCGAGAAGAACCGAGACTGGACGCCATTGCGGCCGTCATGGAG
GAGGGAAAGTTGTTGTTCAGAGTTCGTGTTGAAAATGGATGGATTCTTGT
TTGGGGTATCCATGATGAGAGAGGAAATAGTTCTTTGCTGGGCGGCTTCT
ATGCCGACGGTACTCTAAATCCTAACTGA
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