Ggra3857.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3857.t1
Unique NameGgra3857.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2241482..2242063 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3857Ggra3857Gracilaria gracilis GNS1m malegenetig00000850_pilon 2241482..2242063 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3857.t1.stop1Ggra3857.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 2241482..2241484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3857.t1.CDS1Ggra3857.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 2241482..2242063 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3857.t1.exon1Ggra3857.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 2241482..2242063 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3857.t1.start1Ggra3857.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 2242061..2242063 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3857.t1Ggra3857.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 2241482..2242063 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3857.t1 ID=Ggra3857.t1|Name=Ggra3857.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=194bp
MECNTEETKQIAENLRRTVYLLHEHPHLQSERISSALDLMYRDIKHQISI
ARLSSISRKARRKARTLHKGLYLSKEEAGVTIEEIIDKGSRTPMEVAIEL
RKKGYEGQWMRPRFIKCIVKRVLQKKQEKERLHSKLRNAGKGLPDRFGRP
IKSRAEVMCEMLPDICREMPTDGISGFEDDIQTAIAPMEKVPW*
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spliced messenger RNA

>Ggra3857.t1 ID=Ggra3857.t1|Name=Ggra3857.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:2241482..2242063- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGTGCAACACGGAAGAAACCAAGCAAATTGCTGAGAATCTGCGACG
AACGGTGTATCTGCTCCATGAACATCCACATCTACAGAGCGAGCGAATAA
GCAGCGCTCTCGATCTCATGTACAGAGACATAAAGCACCAAATCTCCATC
GCTCGACTTTCCAGTATCAGCCGAAAGGCCAGACGGAAAGCAAGAACGCT
GCACAAGGGGCTTTATTTGTCGAAAGAAGAAGCTGGAGTCACAATTGAGG
AAATTATAGACAAAGGAAGTCGCACTCCAATGGAAGTCGCTATAGAACTG
AGAAAGAAGGGCTATGAGGGACAGTGGATGCGTCCAAGATTTATAAAGTG
TATTGTGAAGCGTGTCTTACAAAAGAAGCAAGAGAAGGAACGGTTGCACT
CCAAGTTGAGGAATGCAGGTAAGGGTTTACCGGACAGGTTTGGGAGGCCC
ATCAAGAGTAGAGCTGAGGTCATGTGTGAGATGCTTCCGGACATATGCAG
GGAGATGCCTACAGATGGTATTAGCGGTTTTGAAGATGACATTCAGACGG
CCATCGCCCCTATGGAAAAAGTTCCGTGGTAA
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protein sequence of Ggra3857.t1

>Ggra3857.t1 ID=Ggra3857.t1|Name=Ggra3857.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MECNTEETKQIAENLRRTVYLLHEHPHLQSERISSALDLMYRDIKHQISI
ARLSSISRKARRKARTLHKGLYLSKEEAGVTIEEIIDKGSRTPMEVAIEL
RKKGYEGQWMRPRFIKCIVKRVLQKKQEKERLHSKLRNAGKGLPDRFGRP
IKSRAEVMCEMLPDICREMPTDGISGFEDDIQTAIAPMEKVPW*
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mRNA from alignment at tig00000850_pilon:2241482..2242063-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3857.t1 ID=Ggra3857.t1|Name=Ggra3857.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:2241482..2242063- (Gracilaria gracilis GNS1m male)
ATGGAGTGCAACACGGAAGAAACCAAGCAAATTGCTGAGAATCTGCGACG
AACGGTGTATCTGCTCCATGAACATCCACATCTACAGAGCGAGCGAATAA
GCAGCGCTCTCGATCTCATGTACAGAGACATAAAGCACCAAATCTCCATC
GCTCGACTTTCCAGTATCAGCCGAAAGGCCAGACGGAAAGCAAGAACGCT
GCACAAGGGGCTTTATTTGTCGAAAGAAGAAGCTGGAGTCACAATTGAGG
AAATTATAGACAAAGGAAGTCGCACTCCAATGGAAGTCGCTATAGAACTG
AGAAAGAAGGGCTATGAGGGACAGTGGATGCGTCCAAGATTTATAAAGTG
TATTGTGAAGCGTGTCTTACAAAAGAAGCAAGAGAAGGAACGGTTGCACT
CCAAGTTGAGGAATGCAGGTAAGGGTTTACCGGACAGGTTTGGGAGGCCC
ATCAAGAGTAGAGCTGAGGTCATGTGTGAGATGCTTCCGGACATATGCAG
GGAGATGCCTACAGATGGTATTAGCGGTTTTGAAGATGACATTCAGACGG
CCATCGCCCCTATGGAAAAAGTTCCGTGGTAA
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Coding sequence (CDS) from alignment at tig00000850_pilon:2241482..2242063-

>Ggra3857.t1 ID=Ggra3857.t1|Name=Ggra3857.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=582bp|location=Sequence derived from alignment at tig00000850_pilon:2241482..2242063- (Gracilaria gracilis GNS1m male)
ATGGAGTGCAACACGGAAGAAACCAAGCAAATTGCTGAGAATCTGCGACG
AACGGTGTATCTGCTCCATGAACATCCACATCTACAGAGCGAGCGAATAA
GCAGCGCTCTCGATCTCATGTACAGAGACATAAAGCACCAAATCTCCATC
GCTCGACTTTCCAGTATCAGCCGAAAGGCCAGACGGAAAGCAAGAACGCT
GCACAAGGGGCTTTATTTGTCGAAAGAAGAAGCTGGAGTCACAATTGAGG
AAATTATAGACAAAGGAAGTCGCACTCCAATGGAAGTCGCTATAGAACTG
AGAAAGAAGGGCTATGAGGGACAGTGGATGCGTCCAAGATTTATAAAGTG
TATTGTGAAGCGTGTCTTACAAAAGAAGCAAGAGAAGGAACGGTTGCACT
CCAAGTTGAGGAATGCAGGTAAGGGTTTACCGGACAGGTTTGGGAGGCCC
ATCAAGAGTAGAGCTGAGGTCATGTGTGAGATGCTTCCGGACATATGCAG
GGAGATGCCTACAGATGGTATTAGCGGTTTTGAAGATGACATTCAGACGG
CCATCGCCCCTATGGAAAAAGTTCCGTGGTAA
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