Ggra3845.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3845.t1
Unique NameGgra3845.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length352
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2209347..2210402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3845Ggra3845Gracilaria gracilis GNS1m malegenetig00000850_pilon 2209347..2210402 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3845.t1.start1Ggra3845.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 2209347..2209349 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3845.t1.CDS1Ggra3845.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 2209347..2210402 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3845.t1.exon1Ggra3845.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 2209347..2210402 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3845.t1.stop1Ggra3845.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 2210400..2210402 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3845.t1Ggra3845.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 2209347..2210402 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3845.t1 ID=Ggra3845.t1|Name=Ggra3845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=352bp
MCSVSSFTFQKRLGCMSFGKSKEALLRKHFPKCSEEVGTVLESKHGNYGF
AYDELSGMNRKKKLNSSWNEAMLRAQTITKRFTEEEEKGFENLRQFWTIQ
WKDSYEGFCRVRNEVADLREVVFHGNLERSKEQETLRNLLNRMLRSNARE
WFAVWGELDLHRLSPNDALDSLNRCICNWMWDEVRIISGQRAHNGDHVSK
GVLFNLIHCVTGRAKPDTSKFDKRRIEDINNTRLYIHNNGIDVFYYSDGG
ALYLRRSEEAQKEYLKRLERPSRLSSSSRRKIRFSEANANWPQGSAWEKS
KDTSRRSARLSESRRKTRSSAPTRNSGKPLPTPIRRSPRLSKKLKKPSHM
K*
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spliced messenger RNA

>Ggra3845.t1 ID=Ggra3845.t1|Name=Ggra3845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1056bp|location=Sequence derived from alignment at tig00000850_pilon:2209347..2210402+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCTCTGTATCGTCGTTCACATTCCAGAAACGGCTTGGCTGCATGAG
CTTCGGGAAAAGCAAGGAGGCCCTATTGCGTAAACATTTTCCCAAATGCT
CTGAAGAAGTTGGAACTGTTCTTGAGTCAAAACATGGAAACTATGGTTTT
GCATATGATGAACTTTCAGGGATGAATAGAAAGAAAAAGTTAAATAGTTC
CTGGAATGAAGCAATGCTGCGGGCCCAAACAATCACGAAAAGATTTACAG
AAGAAGAAGAGAAGGGCTTCGAGAATCTTCGCCAATTCTGGACCATTCAG
TGGAAAGATTCCTACGAGGGATTCTGTCGTGTCCGCAATGAAGTCGCTGA
TTTGCGCGAAGTTGTGTTTCATGGTAACTTAGAGAGGTCAAAGGAACAGG
AGACGTTACGGAATCTCCTTAACAGGATGCTTCGTTCAAATGCAAGGGAG
TGGTTTGCTGTTTGGGGAGAACTAGATCTTCATAGACTATCCCCAAATGA
CGCCCTTGATTCTTTAAATCGTTGTATCTGTAATTGGATGTGGGATGAAG
TTCGAATCATATCGGGCCAGAGGGCGCACAACGGGGACCATGTTTCAAAA
GGGGTTCTGTTCAACCTGATCCACTGCGTCACTGGTAGAGCCAAGCCTGA
CACATCTAAGTTCGACAAAAGGAGAATCGAAGATATAAATAATACCAGGC
TTTATATCCATAATAACGGGATAGACGTTTTCTATTACTCGGATGGCGGT
GCTCTCTACCTCAGGAGGTCGGAAGAAGCACAGAAAGAGTACTTGAAGCG
CTTAGAGCGGCCTTCTCGTTTGTCTAGCTCATCAAGAAGAAAGATTCGTT
TCTCAGAAGCGAATGCGAATTGGCCGCAAGGGAGTGCATGGGAGAAGTCG
AAGGACACCTCTCGGAGGTCTGCAAGACTGTCAGAGTCACGCAGGAAGAC
CCGTTCTTCGGCTCCTACTCGGAACAGCGGTAAGCCACTTCCTACCCCCA
TTAGAAGATCTCCAAGACTTTCCAAGAAGTTGAAGAAGCCTAGTCATATG
AAATGA
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protein sequence of Ggra3845.t1

>Ggra3845.t1 ID=Ggra3845.t1|Name=Ggra3845.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=352bp
MCSVSSFTFQKRLGCMSFGKSKEALLRKHFPKCSEEVGTVLESKHGNYGF
AYDELSGMNRKKKLNSSWNEAMLRAQTITKRFTEEEEKGFENLRQFWTIQ
WKDSYEGFCRVRNEVADLREVVFHGNLERSKEQETLRNLLNRMLRSNARE
WFAVWGELDLHRLSPNDALDSLNRCICNWMWDEVRIISGQRAHNGDHVSK
GVLFNLIHCVTGRAKPDTSKFDKRRIEDINNTRLYIHNNGIDVFYYSDGG
ALYLRRSEEAQKEYLKRLERPSRLSSSSRRKIRFSEANANWPQGSAWEKS
KDTSRRSARLSESRRKTRSSAPTRNSGKPLPTPIRRSPRLSKKLKKPSHM
K*
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mRNA from alignment at tig00000850_pilon:2209347..2210402+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3845.t1 ID=Ggra3845.t1|Name=Ggra3845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1056bp|location=Sequence derived from alignment at tig00000850_pilon:2209347..2210402+ (Gracilaria gracilis GNS1m male)
ATGTGCTCTGTATCGTCGTTCACATTCCAGAAACGGCTTGGCTGCATGAG
CTTCGGGAAAAGCAAGGAGGCCCTATTGCGTAAACATTTTCCCAAATGCT
CTGAAGAAGTTGGAACTGTTCTTGAGTCAAAACATGGAAACTATGGTTTT
GCATATGATGAACTTTCAGGGATGAATAGAAAGAAAAAGTTAAATAGTTC
CTGGAATGAAGCAATGCTGCGGGCCCAAACAATCACGAAAAGATTTACAG
AAGAAGAAGAGAAGGGCTTCGAGAATCTTCGCCAATTCTGGACCATTCAG
TGGAAAGATTCCTACGAGGGATTCTGTCGTGTCCGCAATGAAGTCGCTGA
TTTGCGCGAAGTTGTGTTTCATGGTAACTTAGAGAGGTCAAAGGAACAGG
AGACGTTACGGAATCTCCTTAACAGGATGCTTCGTTCAAATGCAAGGGAG
TGGTTTGCTGTTTGGGGAGAACTAGATCTTCATAGACTATCCCCAAATGA
CGCCCTTGATTCTTTAAATCGTTGTATCTGTAATTGGATGTGGGATGAAG
TTCGAATCATATCGGGCCAGAGGGCGCACAACGGGGACCATGTTTCAAAA
GGGGTTCTGTTCAACCTGATCCACTGCGTCACTGGTAGAGCCAAGCCTGA
CACATCTAAGTTCGACAAAAGGAGAATCGAAGATATAAATAATACCAGGC
TTTATATCCATAATAACGGGATAGACGTTTTCTATTACTCGGATGGCGGT
GCTCTCTACCTCAGGAGGTCGGAAGAAGCACAGAAAGAGTACTTGAAGCG
CTTAGAGCGGCCTTCTCGTTTGTCTAGCTCATCAAGAAGAAAGATTCGTT
TCTCAGAAGCGAATGCGAATTGGCCGCAAGGGAGTGCATGGGAGAAGTCG
AAGGACACCTCTCGGAGGTCTGCAAGACTGTCAGAGTCACGCAGGAAGAC
CCGTTCTTCGGCTCCTACTCGGAACAGCGGTAAGCCACTTCCTACCCCCA
TTAGAAGATCTCCAAGACTTTCCAAGAAGTTGAAGAAGCCTAGTCATATG
AAATGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:2209347..2210402+

>Ggra3845.t1 ID=Ggra3845.t1|Name=Ggra3845.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1056bp|location=Sequence derived from alignment at tig00000850_pilon:2209347..2210402+ (Gracilaria gracilis GNS1m male)
ATGTGCTCTGTATCGTCGTTCACATTCCAGAAACGGCTTGGCTGCATGAG
CTTCGGGAAAAGCAAGGAGGCCCTATTGCGTAAACATTTTCCCAAATGCT
CTGAAGAAGTTGGAACTGTTCTTGAGTCAAAACATGGAAACTATGGTTTT
GCATATGATGAACTTTCAGGGATGAATAGAAAGAAAAAGTTAAATAGTTC
CTGGAATGAAGCAATGCTGCGGGCCCAAACAATCACGAAAAGATTTACAG
AAGAAGAAGAGAAGGGCTTCGAGAATCTTCGCCAATTCTGGACCATTCAG
TGGAAAGATTCCTACGAGGGATTCTGTCGTGTCCGCAATGAAGTCGCTGA
TTTGCGCGAAGTTGTGTTTCATGGTAACTTAGAGAGGTCAAAGGAACAGG
AGACGTTACGGAATCTCCTTAACAGGATGCTTCGTTCAAATGCAAGGGAG
TGGTTTGCTGTTTGGGGAGAACTAGATCTTCATAGACTATCCCCAAATGA
CGCCCTTGATTCTTTAAATCGTTGTATCTGTAATTGGATGTGGGATGAAG
TTCGAATCATATCGGGCCAGAGGGCGCACAACGGGGACCATGTTTCAAAA
GGGGTTCTGTTCAACCTGATCCACTGCGTCACTGGTAGAGCCAAGCCTGA
CACATCTAAGTTCGACAAAAGGAGAATCGAAGATATAAATAATACCAGGC
TTTATATCCATAATAACGGGATAGACGTTTTCTATTACTCGGATGGCGGT
GCTCTCTACCTCAGGAGGTCGGAAGAAGCACAGAAAGAGTACTTGAAGCG
CTTAGAGCGGCCTTCTCGTTTGTCTAGCTCATCAAGAAGAAAGATTCGTT
TCTCAGAAGCGAATGCGAATTGGCCGCAAGGGAGTGCATGGGAGAAGTCG
AAGGACACCTCTCGGAGGTCTGCAAGACTGTCAGAGTCACGCAGGAAGAC
CCGTTCTTCGGCTCCTACTCGGAACAGCGGTAAGCCACTTCCTACCCCCA
TTAGAAGATCTCCAAGACTTTCCAAGAAGTTGAAGAAGCCTAGTCATATG
AAATGA
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