Ggra3795.t2 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3795.t2
Unique NameGgra3795.t2
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1882018..1883103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3795Ggra3795Gracilaria gracilis GNS1m malegenetig00000850_pilon 1882018..1883103 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t2.stop1Ggra3795.t2.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1882018..1882020 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t2.CDS1Ggra3795.t2.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1882018..1883103 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t2.exon1Ggra3795.t2.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1882018..1883103 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t2.start1Ggra3795.t2.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1883101..1883103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3795.t2Ggra3795.t2Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1882018..1883103 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3795.t2 ID=Ggra3795.t2|Name=Ggra3795.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=362bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLL
IGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAP
QACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPS
RVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVP
QFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPS
VNYEIVKVNAC*
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spliced messenger RNA

>Ggra3795.t2 ID=Ggra3795.t2|Name=Ggra3795.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1882018..1883103- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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protein sequence of Ggra3795.t2

>Ggra3795.t2 ID=Ggra3795.t2|Name=Ggra3795.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MECALNPMADQNNPCPNGEVPVENVTLVHFRPVEFDLAINLRGYPLDVIL
LIDASSPSSRINAIKPELVSLLRRLDGEAKVSVAIYGSEQEFDSSGYSVL
ASASDDVNRAIQALDRIPQKADGPRTTLTALRSLKSGGLNLGGFKEVVLL
IGDTPGREPECAVGMDRVQTAGDMFSYYSGMVVLPGSLGAPGLDTALPAP
QACTNSPIEPKPVAEGQASYIASKSQGEMIESLTAETMFQAIDRARRTPS
RVYQNPPGSQISVSTAKFPSIVGPFNVPEEYQTYSNGCEERVTATLMSVP
QFVSAPAQMNAKVKLSLPANACQGGSFSCEVRIVEHHRGYESYSHWSLPS
VNYEIVKVNAC*
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mRNA from alignment at tig00000850_pilon:1882018..1883103-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3795.t2 ID=Ggra3795.t2|Name=Ggra3795.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1882018..1883103- (Gracilaria gracilis GNS1m male)
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1882018..1883103-

>Ggra3795.t2 ID=Ggra3795.t2|Name=Ggra3795.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1882018..1883103- (Gracilaria gracilis GNS1m male)
ATGGAATGCGCATTGAATCCAATGGCTGATCAGAACAATCCCTGTCCAAA
TGGTGAAGTTCCTGTGGAAAATGTTACACTCGTACATTTTCGCCCAGTTG
AATTCGATTTGGCAATAAATCTGCGTGGTTATCCTCTTGACGTTATCTTG
CTGATCGACGCCAGTTCTCCGAGCTCTCGGATTAATGCCATTAAGCCGGA
ATTGGTTTCATTACTCAGAAGATTAGACGGAGAAGCGAAGGTTAGTGTTG
CAATCTATGGATCGGAGCAAGAGTTTGACTCATCTGGTTATTCAGTTCTT
GCCTCTGCCTCTGATGATGTGAATCGTGCAATTCAAGCACTTGACCGCAT
TCCTCAAAAGGCTGATGGACCCCGTACGACGTTAACCGCTCTGCGTTCTT
TGAAAAGTGGTGGGCTTAATCTAGGTGGGTTCAAAGAGGTCGTTCTCCTT
ATCGGTGATACCCCTGGAAGAGAACCGGAATGCGCAGTCGGAATGGATCG
GGTCCAGACAGCAGGGGATATGTTCAGTTACTACAGTGGAATGGTGGTAT
TGCCGGGAAGTCTAGGAGCGCCAGGCCTAGATACTGCTCTTCCCGCGCCT
CAAGCGTGTACCAATTCCCCAATCGAACCCAAGCCCGTCGCTGAAGGACA
AGCTAGTTACATAGCCTCAAAAAGCCAAGGCGAGATGATCGAATCTCTCA
CCGCTGAGACGATGTTTCAAGCCATAGATCGCGCTAGAAGAACGCCTAGC
AGGGTTTATCAAAACCCACCTGGAAGCCAGATAAGCGTCAGTACGGCCAA
GTTCCCTTCAATTGTAGGACCATTCAATGTCCCTGAAGAGTACCAAACCT
ACAGCAATGGCTGTGAGGAAAGGGTTACAGCGACTTTAATGAGTGTTCCA
CAATTTGTGAGTGCTCCAGCCCAAATGAACGCCAAAGTCAAGCTCAGCTT
ACCGGCTAATGCTTGTCAAGGAGGATCGTTCTCATGCGAAGTGAGGATTG
TTGAACATCATCGTGGATATGAATCCTATAGCCACTGGTCATTGCCTTCT
GTGAACTATGAAATTGTCAAAGTCAATGCATGTTAA
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