Ggra3757.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3757.t1
Unique NameGgra3757.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1332919..1333737 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3757Ggra3757Gracilaria gracilis GNS1m malegenetig00000850_pilon 1332919..1333737 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3757.t1.start1Ggra3757.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1332919..1332921 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3757.t1.CDS1Ggra3757.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1332919..1333737 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3757.t1.exon1Ggra3757.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1332919..1333737 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3757.t1.stop1Ggra3757.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1333735..1333737 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3757.t1Ggra3757.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1332919..1333737 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3757.t1 ID=Ggra3757.t1|Name=Ggra3757.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=273bp
MTVQASSPSSRRRRRPAIIQRVTNILCKRFSAPVSPKAAPPQASFESLTP
PDTPGTPQRRIAHQRHRLFSASGACASPLSSSPLTASPASAASPASAAAR
APDRRPEASSLSCAHRADRSGARRRMSARFSARTLSRLDAVRGNVAEKRR
TKSLMGCECEAAQERDVLSTRLGELAMTEMENESLRAQVDDLQRAVESVR
KQAQEEVDCLVFEMQVLKKRARLEDGEFVQYSDDEEEHDGMHDEADTMGT
LWLGEGALDAAEVAARLEWQEE*
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spliced messenger RNA

>Ggra3757.t1 ID=Ggra3757.t1|Name=Ggra3757.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=819bp|location=Sequence derived from alignment at tig00000850_pilon:1332919..1333737+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGTGCAAGCTTCATCCCCGTCCTCGCGTCGCAGAAGGCGGCCGGC
CATCATCCAGCGCGTCACCAACATTCTCTGCAAGCGCTTCAGCGCGCCGG
TGTCGCCCAAAGCCGCGCCGCCGCAAGCCTCCTTCGAGAGCCTGACGCCC
CCGGACACGCCCGGAACGCCGCAGAGAAGAATAGCGCATCAGCGCCACCG
GCTGTTCTCCGCGTCTGGCGCGTGCGCCTCGCCTCTGAGCAGCTCTCCTC
TGACGGCGTCGCCCGCGTCAGCGGCGTCGCCCGCGTCAGCGGCGGCGCGC
GCGCCGGACCGGCGGCCGGAAGCATCGTCGCTGTCGTGTGCGCACCGTGC
AGACCGCTCCGGCGCGCGGCGGCGCATGTCGGCGCGCTTTTCGGCGCGCA
CGCTGTCGCGGCTGGACGCGGTGCGCGGCAACGTGGCGGAGAAGAGGCGC
ACCAAGTCGCTGATGGGCTGTGAATGTGAGGCGGCTCAGGAACGTGACGT
GCTTTCAACACGGCTGGGCGAGCTGGCCATGACGGAGATGGAGAACGAGA
GCCTGCGCGCGCAGGTGGACGACCTGCAACGCGCGGTGGAAAGTGTGCGC
AAACAGGCGCAGGAGGAAGTGGACTGTCTGGTGTTTGAGATGCAGGTGCT
CAAGAAGAGAGCACGGCTGGAAGACGGCGAGTTTGTGCAGTACTCTGATG
ATGAGGAGGAGCACGATGGTATGCATGATGAGGCGGATACCATGGGCACT
CTGTGGCTGGGAGAAGGTGCTCTAGATGCTGCGGAGGTTGCGGCAAGACT
AGAGTGGCAAGAAGAATGA
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protein sequence of Ggra3757.t1

>Ggra3757.t1 ID=Ggra3757.t1|Name=Ggra3757.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MTVQASSPSSRRRRRPAIIQRVTNILCKRFSAPVSPKAAPPQASFESLTP
PDTPGTPQRRIAHQRHRLFSASGACASPLSSSPLTASPASAASPASAAAR
APDRRPEASSLSCAHRADRSGARRRMSARFSARTLSRLDAVRGNVAEKRR
TKSLMGCECEAAQERDVLSTRLGELAMTEMENESLRAQVDDLQRAVESVR
KQAQEEVDCLVFEMQVLKKRARLEDGEFVQYSDDEEEHDGMHDEADTMGT
LWLGEGALDAAEVAARLEWQEE*
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mRNA from alignment at tig00000850_pilon:1332919..1333737+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3757.t1 ID=Ggra3757.t1|Name=Ggra3757.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=819bp|location=Sequence derived from alignment at tig00000850_pilon:1332919..1333737+ (Gracilaria gracilis GNS1m male)
ATGACTGTGCAAGCTTCATCCCCGTCCTCGCGTCGCAGAAGGCGGCCGGC
CATCATCCAGCGCGTCACCAACATTCTCTGCAAGCGCTTCAGCGCGCCGG
TGTCGCCCAAAGCCGCGCCGCCGCAAGCCTCCTTCGAGAGCCTGACGCCC
CCGGACACGCCCGGAACGCCGCAGAGAAGAATAGCGCATCAGCGCCACCG
GCTGTTCTCCGCGTCTGGCGCGTGCGCCTCGCCTCTGAGCAGCTCTCCTC
TGACGGCGTCGCCCGCGTCAGCGGCGTCGCCCGCGTCAGCGGCGGCGCGC
GCGCCGGACCGGCGGCCGGAAGCATCGTCGCTGTCGTGTGCGCACCGTGC
AGACCGCTCCGGCGCGCGGCGGCGCATGTCGGCGCGCTTTTCGGCGCGCA
CGCTGTCGCGGCTGGACGCGGTGCGCGGCAACGTGGCGGAGAAGAGGCGC
ACCAAGTCGCTGATGGGCTGTGAATGTGAGGCGGCTCAGGAACGTGACGT
GCTTTCAACACGGCTGGGCGAGCTGGCCATGACGGAGATGGAGAACGAGA
GCCTGCGCGCGCAGGTGGACGACCTGCAACGCGCGGTGGAAAGTGTGCGC
AAACAGGCGCAGGAGGAAGTGGACTGTCTGGTGTTTGAGATGCAGGTGCT
CAAGAAGAGAGCACGGCTGGAAGACGGCGAGTTTGTGCAGTACTCTGATG
ATGAGGAGGAGCACGATGGTATGCATGATGAGGCGGATACCATGGGCACT
CTGTGGCTGGGAGAAGGTGCTCTAGATGCTGCGGAGGTTGCGGCAAGACT
AGAGTGGCAAGAAGAATGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1332919..1333737+

>Ggra3757.t1 ID=Ggra3757.t1|Name=Ggra3757.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=819bp|location=Sequence derived from alignment at tig00000850_pilon:1332919..1333737+ (Gracilaria gracilis GNS1m male)
ATGACTGTGCAAGCTTCATCCCCGTCCTCGCGTCGCAGAAGGCGGCCGGC
CATCATCCAGCGCGTCACCAACATTCTCTGCAAGCGCTTCAGCGCGCCGG
TGTCGCCCAAAGCCGCGCCGCCGCAAGCCTCCTTCGAGAGCCTGACGCCC
CCGGACACGCCCGGAACGCCGCAGAGAAGAATAGCGCATCAGCGCCACCG
GCTGTTCTCCGCGTCTGGCGCGTGCGCCTCGCCTCTGAGCAGCTCTCCTC
TGACGGCGTCGCCCGCGTCAGCGGCGTCGCCCGCGTCAGCGGCGGCGCGC
GCGCCGGACCGGCGGCCGGAAGCATCGTCGCTGTCGTGTGCGCACCGTGC
AGACCGCTCCGGCGCGCGGCGGCGCATGTCGGCGCGCTTTTCGGCGCGCA
CGCTGTCGCGGCTGGACGCGGTGCGCGGCAACGTGGCGGAGAAGAGGCGC
ACCAAGTCGCTGATGGGCTGTGAATGTGAGGCGGCTCAGGAACGTGACGT
GCTTTCAACACGGCTGGGCGAGCTGGCCATGACGGAGATGGAGAACGAGA
GCCTGCGCGCGCAGGTGGACGACCTGCAACGCGCGGTGGAAAGTGTGCGC
AAACAGGCGCAGGAGGAAGTGGACTGTCTGGTGTTTGAGATGCAGGTGCT
CAAGAAGAGAGCACGGCTGGAAGACGGCGAGTTTGTGCAGTACTCTGATG
ATGAGGAGGAGCACGATGGTATGCATGATGAGGCGGATACCATGGGCACT
CTGTGGCTGGGAGAAGGTGCTCTAGATGCTGCGGAGGTTGCGGCAAGACT
AGAGTGGCAAGAAGAATGA
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