Ggra3720.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3720.t1
Unique NameGgra3720.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1206339..1207436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3720Ggra3720Gracilaria gracilis GNS1m malegenetig00000850_pilon 1206339..1207436 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3720.t1.start1Ggra3720.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1206339..1206341 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3720.t1.CDS1Ggra3720.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1206339..1207436 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3720.t1.exon1Ggra3720.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1206339..1207436 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3720.t1.stop1Ggra3720.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1207434..1207436 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3720.t1Ggra3720.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1206339..1207436 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3720.t1 ID=Ggra3720.t1|Name=Ggra3720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=366bp
MRGISFSAAARPDKHRPTSTQPTLSAQPPSTASKMMKKLSTTFRRKTNVS
PTNILAASNALASSRPVVSAPQPSTPPKPAPRAITFSAGSSVDAPVSPTL
AEPEIPFFDDREPLRPKSNAPMVAAVRGKPAWMRDANAHASAAVHYPRQM
SHQPQVAPDQQPQHGDDPYSRHRHFSFDMGRARPPPCPPAASDEKRKLAA
ARRRRPSRRRWLLPLKQNPDLPKLFDPPAGSNYEKIHRHRDRAEAKILVS
ACTYLESELDRVGSHLKCTQEQTCCSCKTAASENVDANKPCQCASRALLA
AASERLRAVLTMLEDRYDSIEQVYVKSEEYTRAMGKFFQVSPDEFHRILN
ERDMAKRVDSRKSLR*
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spliced messenger RNA

>Ggra3720.t1 ID=Ggra3720.t1|Name=Ggra3720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000850_pilon:1206339..1207436+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCGGCATCTCCTTTTCCGCCGCAGCCAGGCCTGATAAGCATCGGCC
CACCTCCACCCAGCCCACGCTGTCTGCCCAGCCGCCGTCCACTGCCTCCA
AGATGATGAAGAAGCTCAGCACAACCTTCCGCCGCAAGACCAACGTCTCT
CCCACCAACATCCTCGCCGCCTCCAACGCCCTGGCTTCCTCCCGTCCAGT
AGTGTCCGCCCCACAGCCCTCCACTCCACCCAAGCCCGCGCCTCGTGCCA
TCACCTTCTCCGCCGGCAGCTCTGTCGACGCCCCGGTCTCGCCCACCCTG
GCAGAGCCCGAGATACCGTTCTTCGATGACCGCGAGCCGCTGCGTCCCAA
GTCCAACGCGCCGATGGTGGCCGCCGTGCGCGGTAAGCCAGCTTGGATGA
GGGACGCCAACGCACATGCTTCTGCGGCAGTTCATTACCCGCGACAAATG
TCGCATCAACCGCAGGTCGCCCCCGACCAACAGCCGCAGCATGGAGACGA
CCCCTACTCAAGACACAGGCATTTTTCCTTTGACATGGGTCGCGCTCGCC
CACCGCCTTGCCCGCCAGCCGCCTCTGACGAGAAGCGAAAGCTGGCGGCT
GCACGGCGTCGTCGCCCGTCAAGGAGGAGGTGGTTACTACCGCTCAAACA
GAACCCGGACCTTCCAAAGCTGTTTGATCCGCCTGCTGGAAGTAATTACG
AAAAGATCCACCGCCATCGTGATCGGGCAGAAGCCAAAATTCTCGTTTCG
GCGTGCACGTATCTCGAGAGCGAGCTCGACCGCGTTGGATCGCATTTAAA
ATGCACGCAAGAACAGACGTGCTGTTCTTGCAAGACTGCCGCGTCGGAGA
ACGTTGACGCAAACAAGCCGTGTCAGTGCGCTTCTAGAGCGCTATTGGCT
GCCGCCTCTGAGCGACTTCGCGCAGTGCTCACGATGCTGGAAGACCGCTA
TGACAGTATTGAACAGGTGTACGTCAAGAGTGAGGAATACACTCGTGCAA
TGGGTAAGTTCTTTCAAGTGAGCCCGGATGAATTTCACCGTATCTTGAAC
GAGAGAGACATGGCCAAGAGGGTGGACAGCAGGAAGTCACTAAGGTAG
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protein sequence of Ggra3720.t1

>Ggra3720.t1 ID=Ggra3720.t1|Name=Ggra3720.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MRGISFSAAARPDKHRPTSTQPTLSAQPPSTASKMMKKLSTTFRRKTNVS
PTNILAASNALASSRPVVSAPQPSTPPKPAPRAITFSAGSSVDAPVSPTL
AEPEIPFFDDREPLRPKSNAPMVAAVRGKPAWMRDANAHASAAVHYPRQM
SHQPQVAPDQQPQHGDDPYSRHRHFSFDMGRARPPPCPPAASDEKRKLAA
ARRRRPSRRRWLLPLKQNPDLPKLFDPPAGSNYEKIHRHRDRAEAKILVS
ACTYLESELDRVGSHLKCTQEQTCCSCKTAASENVDANKPCQCASRALLA
AASERLRAVLTMLEDRYDSIEQVYVKSEEYTRAMGKFFQVSPDEFHRILN
ERDMAKRVDSRKSLR*
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mRNA from alignment at tig00000850_pilon:1206339..1207436+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3720.t1 ID=Ggra3720.t1|Name=Ggra3720.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000850_pilon:1206339..1207436+ (Gracilaria gracilis GNS1m male)
ATGCGCGGCATCTCCTTTTCCGCCGCAGCCAGGCCTGATAAGCATCGGCC
CACCTCCACCCAGCCCACGCTGTCTGCCCAGCCGCCGTCCACTGCCTCCA
AGATGATGAAGAAGCTCAGCACAACCTTCCGCCGCAAGACCAACGTCTCT
CCCACCAACATCCTCGCCGCCTCCAACGCCCTGGCTTCCTCCCGTCCAGT
AGTGTCCGCCCCACAGCCCTCCACTCCACCCAAGCCCGCGCCTCGTGCCA
TCACCTTCTCCGCCGGCAGCTCTGTCGACGCCCCGGTCTCGCCCACCCTG
GCAGAGCCCGAGATACCGTTCTTCGATGACCGCGAGCCGCTGCGTCCCAA
GTCCAACGCGCCGATGGTGGCCGCCGTGCGCGGTAAGCCAGCTTGGATGA
GGGACGCCAACGCACATGCTTCTGCGGCAGTTCATTACCCGCGACAAATG
TCGCATCAACCGCAGGTCGCCCCCGACCAACAGCCGCAGCATGGAGACGA
CCCCTACTCAAGACACAGGCATTTTTCCTTTGACATGGGTCGCGCTCGCC
CACCGCCTTGCCCGCCAGCCGCCTCTGACGAGAAGCGAAAGCTGGCGGCT
GCACGGCGTCGTCGCCCGTCAAGGAGGAGGTGGTTACTACCGCTCAAACA
GAACCCGGACCTTCCAAAGCTGTTTGATCCGCCTGCTGGAAGTAATTACG
AAAAGATCCACCGCCATCGTGATCGGGCAGAAGCCAAAATTCTCGTTTCG
GCGTGCACGTATCTCGAGAGCGAGCTCGACCGCGTTGGATCGCATTTAAA
ATGCACGCAAGAACAGACGTGCTGTTCTTGCAAGACTGCCGCGTCGGAGA
ACGTTGACGCAAACAAGCCGTGTCAGTGCGCTTCTAGAGCGCTATTGGCT
GCCGCCTCTGAGCGACTTCGCGCAGTGCTCACGATGCTGGAAGACCGCTA
TGACAGTATTGAACAGGTGTACGTCAAGAGTGAGGAATACACTCGTGCAA
TGGGTAAGTTCTTTCAAGTGAGCCCGGATGAATTTCACCGTATCTTGAAC
GAGAGAGACATGGCCAAGAGGGTGGACAGCAGGAAGTCACTAAGGTAG
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Coding sequence (CDS) from alignment at tig00000850_pilon:1206339..1207436+

>Ggra3720.t1 ID=Ggra3720.t1|Name=Ggra3720.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1098bp|location=Sequence derived from alignment at tig00000850_pilon:1206339..1207436+ (Gracilaria gracilis GNS1m male)
ATGCGCGGCATCTCCTTTTCCGCCGCAGCCAGGCCTGATAAGCATCGGCC
CACCTCCACCCAGCCCACGCTGTCTGCCCAGCCGCCGTCCACTGCCTCCA
AGATGATGAAGAAGCTCAGCACAACCTTCCGCCGCAAGACCAACGTCTCT
CCCACCAACATCCTCGCCGCCTCCAACGCCCTGGCTTCCTCCCGTCCAGT
AGTGTCCGCCCCACAGCCCTCCACTCCACCCAAGCCCGCGCCTCGTGCCA
TCACCTTCTCCGCCGGCAGCTCTGTCGACGCCCCGGTCTCGCCCACCCTG
GCAGAGCCCGAGATACCGTTCTTCGATGACCGCGAGCCGCTGCGTCCCAA
GTCCAACGCGCCGATGGTGGCCGCCGTGCGCGGTAAGCCAGCTTGGATGA
GGGACGCCAACGCACATGCTTCTGCGGCAGTTCATTACCCGCGACAAATG
TCGCATCAACCGCAGGTCGCCCCCGACCAACAGCCGCAGCATGGAGACGA
CCCCTACTCAAGACACAGGCATTTTTCCTTTGACATGGGTCGCGCTCGCC
CACCGCCTTGCCCGCCAGCCGCCTCTGACGAGAAGCGAAAGCTGGCGGCT
GCACGGCGTCGTCGCCCGTCAAGGAGGAGGTGGTTACTACCGCTCAAACA
GAACCCGGACCTTCCAAAGCTGTTTGATCCGCCTGCTGGAAGTAATTACG
AAAAGATCCACCGCCATCGTGATCGGGCAGAAGCCAAAATTCTCGTTTCG
GCGTGCACGTATCTCGAGAGCGAGCTCGACCGCGTTGGATCGCATTTAAA
ATGCACGCAAGAACAGACGTGCTGTTCTTGCAAGACTGCCGCGTCGGAGA
ACGTTGACGCAAACAAGCCGTGTCAGTGCGCTTCTAGAGCGCTATTGGCT
GCCGCCTCTGAGCGACTTCGCGCAGTGCTCACGATGCTGGAAGACCGCTA
TGACAGTATTGAACAGGTGTACGTCAAGAGTGAGGAATACACTCGTGCAA
TGGGTAAGTTCTTTCAAGTGAGCCCGGATGAATTTCACCGTATCTTGAAC
GAGAGAGACATGGCCAAGAGGGTGGACAGCAGGAAGTCACTAAGGTAG
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