Ggra3673.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3673.t1
Unique NameGgra3673.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length576
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1052249..1053976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005702618.1
Preferred nameELP3
PFAMsAcetyltransf_1,Radical_SAM,Radical_SAM_C
Max annot lvl2759|Eukaryota
KEGG koko:K07739
GOsGO:0000003,GO:0000123,GO:0000228,GO:0000785,GO:0000790,GO:0000791,GO:0000902,GO:0000904,GO:0001764,GO:0001932,GO:0002097,GO:0002098,GO:0002119,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002520,GO:0002926,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0004402,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005719,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006417,GO:0006448,GO:0006450,GO:0006464,GO:0006473,GO:0006475,GO:0006518,GO:0006725,GO:0006807,GO:0006928,GO:0006996,GO:0007010,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007389,GO:0007399,GO:0007409,GO:0007416,GO:0007417,GO:0007528,GO:0007610,GO:0007611,GO:0007612,GO:0007626,GO:0007635,GO:0008023,GO:0008033,GO:0008080,GO:0008150,GO:0008152,GO:0008283,GO:0008306,GO:0008355,GO:0008607,GO:0009058,GO:0009059,GO:0009292,GO:0009294,GO:0009451,GO:0009653,GO:0009790,GO:0009791,GO:0009798,GO:0009889,GO:0009966,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010484,GO:0010485,GO:0010556,GO:0010608,GO:0010646,GO:0010769,GO:0010928,GO:0010975,GO:0016043,GO:0016070,GO:0016407,GO:0016410,GO:0016477,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019207,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019887,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0030234,GO:0030334,GO:0030335,GO:0030431,GO:0030865,GO:0031175,GO:0031248,GO:0031323,GO:0031326,GO:0031344,GO:0031399,GO:0031974,GO:0031981,GO:0032101,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033588,GO:0034212,GO:0034248,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035265,GO:0036211,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0040025,GO:0042048,GO:0042221,GO:0042325,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043549,GO:0043603,GO:0043604,GO:0043966,GO:0043967,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044764,GO:0045202,GO:0045595,GO:0045664,GO:0045859,GO:0046483,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048569,GO:0048583,GO:0048589,GO:0048598,GO:0048599,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048789,GO:0048812,GO:0048831,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050770,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050808,GO:0050877,GO:0050890,GO:0050896,GO:0050920,GO:0051124,GO:0051128,GO:0051171,GO:0051174,GO:0051179,GO:0051239,GO:0051246,GO:0051252,GO:0051270,GO:0051272,GO:0051276,GO:0051338,GO:0051674,GO:0051704,GO:0051960,GO:0060255,GO:0060284,GO:0061564,GO:0061733,GO:0065001,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090708,GO:0097659,GO:0098772,GO:0099402,GO:0120035,GO:0120036,GO:0120039,GO:0140018,GO:1900247,GO:1900618,GO:1901360,GO:1901362,GO:1901371,GO:1901564,GO:1901566,GO:1901576,GO:1902493,GO:1902494,GO:1902667,GO:1903506,GO:1905392,GO:1905421,GO:1905428,GO:1990234,GO:2000024,GO:2000025,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000289,GO:2000765,GO:2001141
Evalue9.85e-296
EggNOG OGsCOG1243@1|root,KOG2535@2759|Eukaryota
EC2.3.1.48
Descriptionphosphorylase kinase regulator activity
COG categoryBK
BRITEko00000,ko01000,ko03016,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3673Ggra3673Gracilaria gracilis GNS1m malegenetig00000850_pilon 1052249..1053976 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3673.t1.stop1Ggra3673.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1052249..1052251 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3673.t1.CDS1Ggra3673.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1052249..1053976 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3673.t1.exon1Ggra3673.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1052249..1053976 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3673.t1.start1Ggra3673.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1053974..1053976 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3673.t1Ggra3673.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1052249..1053976 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3673.t1 ID=Ggra3673.t1|Name=Ggra3673.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=576bp
MAIESSDYASQQADSAQTGRRKPSRRKLPDQDVAKKAAIADIVAELIRET
DLNQTPSVTALKTAAAKRHRLSDYPKLVDILAAVPPSHRARLAPLLKAKP
VRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGY
EPTSMRAIRARYDPYVQVRSRVDQLRSLGHDVDKVEFILMGGTFMSLDKG
YRDYFVRNLHDALSGHSSKDVLEAVRYSEHSYAKCVALTIESRPDHSSPH
HLSAMLEYGCTRLEIGVQSVYEDVARDTNRGHSVQAVCDCFRLAKDAGFK
VVSHMMPDLPNMGKERDMESFKELFENPAFRPDGLKIYPTLVIRGTGLYE
LWKNGMYKNYAPSELIDLVARILALVPPWVRVYRIQRDIPMPLVSSGVEH
GNLRELALARMADLGLPCRDVRTREVGIQTIHFQINPEQVELIRRDYVAN
DGWETFLSYEDAAQDILVALLRLRQAGPGAKAVRPEMRSDPCSIVRELHV
YGSVVPVHERDPAKFQHKGFGSLLMEEAERIACVEHGSTKMVVISGVGTR
HYYRKLGYHLEGPYMVKHLNDAPVK*
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spliced messenger RNA

>Ggra3673.t1 ID=Ggra3673.t1|Name=Ggra3673.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1728bp|location=Sequence derived from alignment at tig00000850_pilon:1052249..1053976- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTATAGAAAGCTCAGATTATGCATCACAGCAAGCAGATTCGGCGCA
AACAGGCCGTCGAAAACCTTCTCGGAGGAAGCTGCCAGACCAGGATGTGG
CAAAAAAAGCCGCTATTGCCGACATTGTGGCAGAACTCATTCGAGAGACC
GATCTCAACCAGACACCTTCCGTCACGGCACTGAAGACAGCCGCGGCCAA
GCGTCACAGACTCTCAGATTATCCAAAGCTAGTGGACATATTAGCTGCAG
TTCCGCCTTCGCACCGTGCTCGACTGGCTCCGCTGCTCAAGGCAAAACCT
GTTCGCACTGCCAGTGGAATCGCCGTTGTTGCGGTTATGTCCAAACCGCA
CCGCTGCCCTCATATCGCTACAACAGGTAATATTTGCGTTTACTGCCCTG
GCGGCCCGGATAGTGACTTTGAATATTCCACGCAGAGCTACACTGGTTAT
GAACCAACCTCAATGAGAGCTATCCGCGCTCGCTACGATCCATATGTGCA
AGTGCGTTCCAGGGTCGATCAGCTTCGGAGTCTTGGTCACGATGTGGACA
AGGTCGAGTTTATTCTCATGGGTGGCACCTTCATGTCTCTTGATAAGGGG
TACAGAGATTACTTTGTTCGCAATCTCCACGATGCTCTAAGCGGTCATTC
TTCCAAGGATGTTCTCGAAGCCGTGCGCTACTCAGAACACTCATACGCGA
AATGCGTGGCGCTGACGATCGAAAGTCGCCCTGATCACTCTTCCCCACAC
CATTTATCTGCAATGCTCGAGTACGGTTGCACACGCCTCGAAATTGGGGT
CCAGAGCGTATATGAGGATGTTGCGAGAGATACCAACAGAGGGCATTCCG
TACAGGCAGTTTGTGATTGCTTTCGCCTCGCCAAAGATGCTGGTTTCAAG
GTAGTTTCACACATGATGCCGGACCTGCCTAACATGGGCAAGGAGAGAGA
CATGGAGTCGTTCAAAGAGTTGTTCGAAAACCCGGCATTCCGCCCAGACG
GACTCAAGATCTACCCTACACTGGTAATCAGAGGGACGGGTTTGTATGAA
TTGTGGAAGAATGGAATGTACAAAAACTATGCTCCCTCGGAGCTTATAGA
CCTGGTAGCACGCATATTGGCACTTGTTCCTCCGTGGGTACGTGTGTATC
GCATACAGCGTGATATTCCAATGCCCCTCGTTTCATCAGGGGTTGAACAT
GGAAACCTCCGCGAGCTTGCTCTGGCTAGGATGGCAGACCTTGGTCTTCC
TTGCAGGGATGTCAGAACCCGAGAGGTTGGCATACAAACAATACACTTCC
AAATCAATCCAGAACAAGTAGAGTTAATTCGTCGTGATTACGTTGCAAAC
GATGGCTGGGAGACGTTTCTATCTTACGAAGATGCAGCTCAAGATATTTT
AGTCGCCTTGTTGCGGTTGAGGCAAGCCGGTCCAGGCGCAAAGGCTGTAC
GCCCGGAGATGCGAAGCGACCCATGCAGCATAGTTCGAGAACTTCACGTT
TATGGGTCTGTTGTGCCAGTACACGAGCGCGATCCAGCAAAGTTTCAACA
CAAAGGATTTGGTTCTCTTCTTATGGAGGAGGCTGAACGAATTGCTTGCG
TCGAACATGGATCTACGAAGATGGTCGTCATTTCAGGTGTTGGTACTCGC
CATTACTACCGGAAACTCGGATACCATCTAGAAGGCCCGTACATGGTGAA
GCATTTGAATGACGCCCCAGTGAAGTAA
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protein sequence of Ggra3673.t1

>Ggra3673.t1 ID=Ggra3673.t1|Name=Ggra3673.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=576bp
MAIESSDYASQQADSAQTGRRKPSRRKLPDQDVAKKAAIADIVAELIRET
DLNQTPSVTALKTAAAKRHRLSDYPKLVDILAAVPPSHRARLAPLLKAKP
VRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGY
EPTSMRAIRARYDPYVQVRSRVDQLRSLGHDVDKVEFILMGGTFMSLDKG
YRDYFVRNLHDALSGHSSKDVLEAVRYSEHSYAKCVALTIESRPDHSSPH
HLSAMLEYGCTRLEIGVQSVYEDVARDTNRGHSVQAVCDCFRLAKDAGFK
VVSHMMPDLPNMGKERDMESFKELFENPAFRPDGLKIYPTLVIRGTGLYE
LWKNGMYKNYAPSELIDLVARILALVPPWVRVYRIQRDIPMPLVSSGVEH
GNLRELALARMADLGLPCRDVRTREVGIQTIHFQINPEQVELIRRDYVAN
DGWETFLSYEDAAQDILVALLRLRQAGPGAKAVRPEMRSDPCSIVRELHV
YGSVVPVHERDPAKFQHKGFGSLLMEEAERIACVEHGSTKMVVISGVGTR
HYYRKLGYHLEGPYMVKHLNDAPVK*
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mRNA from alignment at tig00000850_pilon:1052249..1053976-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3673.t1 ID=Ggra3673.t1|Name=Ggra3673.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1728bp|location=Sequence derived from alignment at tig00000850_pilon:1052249..1053976- (Gracilaria gracilis GNS1m male)
ATGGCTATAGAAAGCTCAGATTATGCATCACAGCAAGCAGATTCGGCGCA
AACAGGCCGTCGAAAACCTTCTCGGAGGAAGCTGCCAGACCAGGATGTGG
CAAAAAAAGCCGCTATTGCCGACATTGTGGCAGAACTCATTCGAGAGACC
GATCTCAACCAGACACCTTCCGTCACGGCACTGAAGACAGCCGCGGCCAA
GCGTCACAGACTCTCAGATTATCCAAAGCTAGTGGACATATTAGCTGCAG
TTCCGCCTTCGCACCGTGCTCGACTGGCTCCGCTGCTCAAGGCAAAACCT
GTTCGCACTGCCAGTGGAATCGCCGTTGTTGCGGTTATGTCCAAACCGCA
CCGCTGCCCTCATATCGCTACAACAGGTAATATTTGCGTTTACTGCCCTG
GCGGCCCGGATAGTGACTTTGAATATTCCACGCAGAGCTACACTGGTTAT
GAACCAACCTCAATGAGAGCTATCCGCGCTCGCTACGATCCATATGTGCA
AGTGCGTTCCAGGGTCGATCAGCTTCGGAGTCTTGGTCACGATGTGGACA
AGGTCGAGTTTATTCTCATGGGTGGCACCTTCATGTCTCTTGATAAGGGG
TACAGAGATTACTTTGTTCGCAATCTCCACGATGCTCTAAGCGGTCATTC
TTCCAAGGATGTTCTCGAAGCCGTGCGCTACTCAGAACACTCATACGCGA
AATGCGTGGCGCTGACGATCGAAAGTCGCCCTGATCACTCTTCCCCACAC
CATTTATCTGCAATGCTCGAGTACGGTTGCACACGCCTCGAAATTGGGGT
CCAGAGCGTATATGAGGATGTTGCGAGAGATACCAACAGAGGGCATTCCG
TACAGGCAGTTTGTGATTGCTTTCGCCTCGCCAAAGATGCTGGTTTCAAG
GTAGTTTCACACATGATGCCGGACCTGCCTAACATGGGCAAGGAGAGAGA
CATGGAGTCGTTCAAAGAGTTGTTCGAAAACCCGGCATTCCGCCCAGACG
GACTCAAGATCTACCCTACACTGGTAATCAGAGGGACGGGTTTGTATGAA
TTGTGGAAGAATGGAATGTACAAAAACTATGCTCCCTCGGAGCTTATAGA
CCTGGTAGCACGCATATTGGCACTTGTTCCTCCGTGGGTACGTGTGTATC
GCATACAGCGTGATATTCCAATGCCCCTCGTTTCATCAGGGGTTGAACAT
GGAAACCTCCGCGAGCTTGCTCTGGCTAGGATGGCAGACCTTGGTCTTCC
TTGCAGGGATGTCAGAACCCGAGAGGTTGGCATACAAACAATACACTTCC
AAATCAATCCAGAACAAGTAGAGTTAATTCGTCGTGATTACGTTGCAAAC
GATGGCTGGGAGACGTTTCTATCTTACGAAGATGCAGCTCAAGATATTTT
AGTCGCCTTGTTGCGGTTGAGGCAAGCCGGTCCAGGCGCAAAGGCTGTAC
GCCCGGAGATGCGAAGCGACCCATGCAGCATAGTTCGAGAACTTCACGTT
TATGGGTCTGTTGTGCCAGTACACGAGCGCGATCCAGCAAAGTTTCAACA
CAAAGGATTTGGTTCTCTTCTTATGGAGGAGGCTGAACGAATTGCTTGCG
TCGAACATGGATCTACGAAGATGGTCGTCATTTCAGGTGTTGGTACTCGC
CATTACTACCGGAAACTCGGATACCATCTAGAAGGCCCGTACATGGTGAA
GCATTTGAATGACGCCCCAGTGAAGTAA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1052249..1053976-

>Ggra3673.t1 ID=Ggra3673.t1|Name=Ggra3673.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1728bp|location=Sequence derived from alignment at tig00000850_pilon:1052249..1053976- (Gracilaria gracilis GNS1m male)
ATGGCTATAGAAAGCTCAGATTATGCATCACAGCAAGCAGATTCGGCGCA
AACAGGCCGTCGAAAACCTTCTCGGAGGAAGCTGCCAGACCAGGATGTGG
CAAAAAAAGCCGCTATTGCCGACATTGTGGCAGAACTCATTCGAGAGACC
GATCTCAACCAGACACCTTCCGTCACGGCACTGAAGACAGCCGCGGCCAA
GCGTCACAGACTCTCAGATTATCCAAAGCTAGTGGACATATTAGCTGCAG
TTCCGCCTTCGCACCGTGCTCGACTGGCTCCGCTGCTCAAGGCAAAACCT
GTTCGCACTGCCAGTGGAATCGCCGTTGTTGCGGTTATGTCCAAACCGCA
CCGCTGCCCTCATATCGCTACAACAGGTAATATTTGCGTTTACTGCCCTG
GCGGCCCGGATAGTGACTTTGAATATTCCACGCAGAGCTACACTGGTTAT
GAACCAACCTCAATGAGAGCTATCCGCGCTCGCTACGATCCATATGTGCA
AGTGCGTTCCAGGGTCGATCAGCTTCGGAGTCTTGGTCACGATGTGGACA
AGGTCGAGTTTATTCTCATGGGTGGCACCTTCATGTCTCTTGATAAGGGG
TACAGAGATTACTTTGTTCGCAATCTCCACGATGCTCTAAGCGGTCATTC
TTCCAAGGATGTTCTCGAAGCCGTGCGCTACTCAGAACACTCATACGCGA
AATGCGTGGCGCTGACGATCGAAAGTCGCCCTGATCACTCTTCCCCACAC
CATTTATCTGCAATGCTCGAGTACGGTTGCACACGCCTCGAAATTGGGGT
CCAGAGCGTATATGAGGATGTTGCGAGAGATACCAACAGAGGGCATTCCG
TACAGGCAGTTTGTGATTGCTTTCGCCTCGCCAAAGATGCTGGTTTCAAG
GTAGTTTCACACATGATGCCGGACCTGCCTAACATGGGCAAGGAGAGAGA
CATGGAGTCGTTCAAAGAGTTGTTCGAAAACCCGGCATTCCGCCCAGACG
GACTCAAGATCTACCCTACACTGGTAATCAGAGGGACGGGTTTGTATGAA
TTGTGGAAGAATGGAATGTACAAAAACTATGCTCCCTCGGAGCTTATAGA
CCTGGTAGCACGCATATTGGCACTTGTTCCTCCGTGGGTACGTGTGTATC
GCATACAGCGTGATATTCCAATGCCCCTCGTTTCATCAGGGGTTGAACAT
GGAAACCTCCGCGAGCTTGCTCTGGCTAGGATGGCAGACCTTGGTCTTCC
TTGCAGGGATGTCAGAACCCGAGAGGTTGGCATACAAACAATACACTTCC
AAATCAATCCAGAACAAGTAGAGTTAATTCGTCGTGATTACGTTGCAAAC
GATGGCTGGGAGACGTTTCTATCTTACGAAGATGCAGCTCAAGATATTTT
AGTCGCCTTGTTGCGGTTGAGGCAAGCCGGTCCAGGCGCAAAGGCTGTAC
GCCCGGAGATGCGAAGCGACCCATGCAGCATAGTTCGAGAACTTCACGTT
TATGGGTCTGTTGTGCCAGTACACGAGCGCGATCCAGCAAAGTTTCAACA
CAAAGGATTTGGTTCTCTTCTTATGGAGGAGGCTGAACGAATTGCTTGCG
TCGAACATGGATCTACGAAGATGGTCGTCATTTCAGGTGTTGGTACTCGC
CATTACTACCGGAAACTCGGATACCATCTAGAAGGCCCGTACATGGTGAA
GCATTTGAATGACGCCCCAGTGAAGTAA
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