Ggra3658.t2 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3658.t2
Unique NameGgra3658.t2
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length305
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:871104..872018 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3658Ggra3658Gracilaria gracilis GNS1m malegenetig00000850_pilon 870567..872018 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3658.t2.start1Ggra3658.t2.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 871104..871106 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3658.t2.CDS1Ggra3658.t2.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 871104..872018 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3658.t2.exon1Ggra3658.t2.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 871104..872018 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3658.t2.stop1Ggra3658.t2.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 872016..872018 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3658.t2Ggra3658.t2Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 871104..872018 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3658.t2 ID=Ggra3658.t2|Name=Ggra3658.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=305bp
MLDTVGNWTITGENKGQPLEFPSQICELSNYGGFRLRGKWWAGIGLSNQP
DDFHVPDGKRVSIGEVHRIENGTIVPALMTLPINPGIGEEHKVTDRATTL
LTIWGGAINSFSRFEPSTAHENVGLKAALEKGANFAQQMEGVILASNIAI
LGLPLVLNLVPVSLISSCEKWRKVIYILLSDILTALPMFIKGIELYSIGN
AKFTEIVTRMGDTFEVGTVGVEMWIASCRVSQGAQTIGTVFITVASLAMV
LGVLLEVIASSLVSRARKRKQLAMEEMQVLEQFEGTGWKYYDEFCQSQAG
WKTI*
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spliced messenger RNA

>Ggra3658.t2 ID=Ggra3658.t2|Name=Ggra3658.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=915bp|location=Sequence derived from alignment at tig00000850_pilon:871104..872018+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCGACACAGTAGGAAACTGGACAATTACCGGAGAAAACAAGGGACA
ACCGTTAGAGTTTCCATCACAGATATGTGAGCTGAGTAACTATGGTGGTT
TTCGCTTACGGGGAAAATGGTGGGCTGGTATTGGTCTGTCTAACCAGCCA
GACGATTTCCATGTTCCGGATGGTAAGCGCGTGTCAATCGGCGAAGTGCA
TCGAATTGAAAATGGAACGATTGTCCCTGCGTTAATGACACTGCCAATTA
ACCCTGGGATTGGGGAAGAGCATAAGGTGACTGACCGCGCTACGACTCTC
TTGACCATATGGGGTGGAGCAATCAATTCTTTCTCTCGTTTCGAACCCTC
TACTGCTCACGAGAACGTGGGCTTAAAGGCGGCGCTGGAAAAGGGGGCCA
ATTTCGCGCAACAAATGGAAGGTGTGATACTCGCTTCTAACATTGCCATA
CTTGGATTACCACTAGTGCTGAACTTGGTGCCAGTTTCGCTGATATCCTC
ATGTGAAAAGTGGAGAAAAGTGATATACATATTGCTAAGCGATATACTAA
CAGCGTTGCCCATGTTCATAAAAGGAATTGAACTTTATAGCATTGGGAAC
GCTAAGTTCACGGAGATCGTAACTCGAATGGGCGACACGTTTGAGGTGGG
CACAGTTGGCGTGGAGATGTGGATTGCCTCTTGCCGGGTGAGTCAAGGCG
CCCAAACAATTGGCACGGTATTCATCACTGTAGCTTCCCTGGCTATGGTT
TTAGGGGTGTTGCTAGAAGTGATTGCCAGTTCATTGGTGTCACGAGCGAG
AAAAAGAAAGCAGCTCGCAATGGAAGAGATGCAGGTACTCGAACAATTCG
AAGGAACTGGTTGGAAGTACTACGACGAATTTTGTCAGTCTCAGGCTGGG
TGGAAAACGATATAG
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protein sequence of Ggra3658.t2

>Ggra3658.t2 ID=Ggra3658.t2|Name=Ggra3658.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=305bp
MLDTVGNWTITGENKGQPLEFPSQICELSNYGGFRLRGKWWAGIGLSNQP
DDFHVPDGKRVSIGEVHRIENGTIVPALMTLPINPGIGEEHKVTDRATTL
LTIWGGAINSFSRFEPSTAHENVGLKAALEKGANFAQQMEGVILASNIAI
LGLPLVLNLVPVSLISSCEKWRKVIYILLSDILTALPMFIKGIELYSIGN
AKFTEIVTRMGDTFEVGTVGVEMWIASCRVSQGAQTIGTVFITVASLAMV
LGVLLEVIASSLVSRARKRKQLAMEEMQVLEQFEGTGWKYYDEFCQSQAG
WKTI*
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mRNA from alignment at tig00000850_pilon:871104..872018+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3658.t2 ID=Ggra3658.t2|Name=Ggra3658.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=915bp|location=Sequence derived from alignment at tig00000850_pilon:871104..872018+ (Gracilaria gracilis GNS1m male)
ATGCTCGACACAGTAGGAAACTGGACAATTACCGGAGAAAACAAGGGACA
ACCGTTAGAGTTTCCATCACAGATATGTGAGCTGAGTAACTATGGTGGTT
TTCGCTTACGGGGAAAATGGTGGGCTGGTATTGGTCTGTCTAACCAGCCA
GACGATTTCCATGTTCCGGATGGTAAGCGCGTGTCAATCGGCGAAGTGCA
TCGAATTGAAAATGGAACGATTGTCCCTGCGTTAATGACACTGCCAATTA
ACCCTGGGATTGGGGAAGAGCATAAGGTGACTGACCGCGCTACGACTCTC
TTGACCATATGGGGTGGAGCAATCAATTCTTTCTCTCGTTTCGAACCCTC
TACTGCTCACGAGAACGTGGGCTTAAAGGCGGCGCTGGAAAAGGGGGCCA
ATTTCGCGCAACAAATGGAAGGTGTGATACTCGCTTCTAACATTGCCATA
CTTGGATTACCACTAGTGCTGAACTTGGTGCCAGTTTCGCTGATATCCTC
ATGTGAAAAGTGGAGAAAAGTGATATACATATTGCTAAGCGATATACTAA
CAGCGTTGCCCATGTTCATAAAAGGAATTGAACTTTATAGCATTGGGAAC
GCTAAGTTCACGGAGATCGTAACTCGAATGGGCGACACGTTTGAGGTGGG
CACAGTTGGCGTGGAGATGTGGATTGCCTCTTGCCGGGTGAGTCAAGGCG
CCCAAACAATTGGCACGGTATTCATCACTGTAGCTTCCCTGGCTATGGTT
TTAGGGGTGTTGCTAGAAGTGATTGCCAGTTCATTGGTGTCACGAGCGAG
AAAAAGAAAGCAGCTCGCAATGGAAGAGATGCAGGTACTCGAACAATTCG
AAGGAACTGGTTGGAAGTACTACGACGAATTTTGTCAGTCTCAGGCTGGG
TGGAAAACGATATAG
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Coding sequence (CDS) from alignment at tig00000850_pilon:871104..872018+

>Ggra3658.t2 ID=Ggra3658.t2|Name=Ggra3658.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=915bp|location=Sequence derived from alignment at tig00000850_pilon:871104..872018+ (Gracilaria gracilis GNS1m male)
ATGCTCGACACAGTAGGAAACTGGACAATTACCGGAGAAAACAAGGGACA
ACCGTTAGAGTTTCCATCACAGATATGTGAGCTGAGTAACTATGGTGGTT
TTCGCTTACGGGGAAAATGGTGGGCTGGTATTGGTCTGTCTAACCAGCCA
GACGATTTCCATGTTCCGGATGGTAAGCGCGTGTCAATCGGCGAAGTGCA
TCGAATTGAAAATGGAACGATTGTCCCTGCGTTAATGACACTGCCAATTA
ACCCTGGGATTGGGGAAGAGCATAAGGTGACTGACCGCGCTACGACTCTC
TTGACCATATGGGGTGGAGCAATCAATTCTTTCTCTCGTTTCGAACCCTC
TACTGCTCACGAGAACGTGGGCTTAAAGGCGGCGCTGGAAAAGGGGGCCA
ATTTCGCGCAACAAATGGAAGGTGTGATACTCGCTTCTAACATTGCCATA
CTTGGATTACCACTAGTGCTGAACTTGGTGCCAGTTTCGCTGATATCCTC
ATGTGAAAAGTGGAGAAAAGTGATATACATATTGCTAAGCGATATACTAA
CAGCGTTGCCCATGTTCATAAAAGGAATTGAACTTTATAGCATTGGGAAC
GCTAAGTTCACGGAGATCGTAACTCGAATGGGCGACACGTTTGAGGTGGG
CACAGTTGGCGTGGAGATGTGGATTGCCTCTTGCCGGGTGAGTCAAGGCG
CCCAAACAATTGGCACGGTATTCATCACTGTAGCTTCCCTGGCTATGGTT
TTAGGGGTGTTGCTAGAAGTGATTGCCAGTTCATTGGTGTCACGAGCGAG
AAAAAGAAAGCAGCTCGCAATGGAAGAGATGCAGGTACTCGAACAATTCG
AAGGAACTGGTTGGAAGTACTACGACGAATTTTGTCAGTCTCAGGCTGGG
TGGAAAACGATATAG
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