Ggra363.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra363.t1
Unique NameGgra363.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length171
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:160526..161038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra363Ggra363Gracilaria gracilis GNS1m malegenetig00000950_pilon 160526..161038 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra363.t1.stop1Ggra363.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000950_pilon 160526..160528 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra363.t1.CDS1Ggra363.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000950_pilon 160526..161038 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra363.t1.exon1Ggra363.t1.exon1Gracilaria gracilis GNS1m maleexontig00000950_pilon 160526..161038 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra363.t1.start1Ggra363.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000950_pilon 161036..161038 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra363.t1Ggra363.t1Gracilaria gracilis GNS1m malepolypeptidetig00000950_pilon 160526..161038 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra363.t1 ID=Ggra363.t1|Name=Ggra363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=171bp
MDDESNYRADEDSFFDPATICANLLKTCFDDFSEPVISDDFAFATEAGLQ
QAIEVLESSFNMLSTNQLNQLRVALKEASIPFEDFSNQPSNDHTQGEKSD
GHGTSQYSSNDDYRGGYLSSEFNSRCVFQDELEDIRTMTSVLDKKEKKGV
EPRSPPGVIDLESVHERSTA*
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spliced messenger RNA

>Ggra363.t1 ID=Ggra363.t1|Name=Ggra363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=513bp|location=Sequence derived from alignment at tig00000950_pilon:160526..161038- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGATGAATCGAACTACCGGGCAGATGAGGACAGTTTCTTCGACCC
GGCTACCATTTGCGCAAACTTGTTGAAGACATGTTTCGATGATTTCAGCG
AACCTGTAATATCGGATGACTTCGCATTTGCTACCGAAGCAGGCTTGCAG
CAAGCTATCGAAGTCCTTGAATCAAGCTTCAATATGCTTTCCACCAATCA
GCTAAATCAATTGCGTGTGGCCCTTAAGGAAGCATCCATACCTTTCGAAG
ACTTTTCGAATCAACCCTCAAATGACCATACCCAAGGCGAGAAATCAGAT
GGCCATGGTACAAGTCAGTACAGCAGCAACGACGATTACCGTGGCGGTTA
TTTAAGCTCAGAGTTTAACAGTCGTTGTGTGTTTCAAGACGAACTTGAGG
ATATTCGAACTATGACCTCCGTGTTAGATAAGAAGGAGAAGAAGGGTGTT
GAACCGCGGTCACCCCCAGGTGTCATTGACCTCGAATCAGTACATGAAAG
AAGTACTGCTTGA
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protein sequence of Ggra363.t1

>Ggra363.t1 ID=Ggra363.t1|Name=Ggra363.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=171bp
MDDESNYRADEDSFFDPATICANLLKTCFDDFSEPVISDDFAFATEAGLQ
QAIEVLESSFNMLSTNQLNQLRVALKEASIPFEDFSNQPSNDHTQGEKSD
GHGTSQYSSNDDYRGGYLSSEFNSRCVFQDELEDIRTMTSVLDKKEKKGV
EPRSPPGVIDLESVHERSTA*
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mRNA from alignment at tig00000950_pilon:160526..161038-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra363.t1 ID=Ggra363.t1|Name=Ggra363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=513bp|location=Sequence derived from alignment at tig00000950_pilon:160526..161038- (Gracilaria gracilis GNS1m male)
ATGGATGATGAATCGAACTACCGGGCAGATGAGGACAGTTTCTTCGACCC
GGCTACCATTTGCGCAAACTTGTTGAAGACATGTTTCGATGATTTCAGCG
AACCTGTAATATCGGATGACTTCGCATTTGCTACCGAAGCAGGCTTGCAG
CAAGCTATCGAAGTCCTTGAATCAAGCTTCAATATGCTTTCCACCAATCA
GCTAAATCAATTGCGTGTGGCCCTTAAGGAAGCATCCATACCTTTCGAAG
ACTTTTCGAATCAACCCTCAAATGACCATACCCAAGGCGAGAAATCAGAT
GGCCATGGTACAAGTCAGTACAGCAGCAACGACGATTACCGTGGCGGTTA
TTTAAGCTCAGAGTTTAACAGTCGTTGTGTGTTTCAAGACGAACTTGAGG
ATATTCGAACTATGACCTCCGTGTTAGATAAGAAGGAGAAGAAGGGTGTT
GAACCGCGGTCACCCCCAGGTGTCATTGACCTCGAATCAGTACATGAAAG
AAGTACTGCTTGA
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Coding sequence (CDS) from alignment at tig00000950_pilon:160526..161038-

>Ggra363.t1 ID=Ggra363.t1|Name=Ggra363.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=513bp|location=Sequence derived from alignment at tig00000950_pilon:160526..161038- (Gracilaria gracilis GNS1m male)
ATGGATGATGAATCGAACTACCGGGCAGATGAGGACAGTTTCTTCGACCC
GGCTACCATTTGCGCAAACTTGTTGAAGACATGTTTCGATGATTTCAGCG
AACCTGTAATATCGGATGACTTCGCATTTGCTACCGAAGCAGGCTTGCAG
CAAGCTATCGAAGTCCTTGAATCAAGCTTCAATATGCTTTCCACCAATCA
GCTAAATCAATTGCGTGTGGCCCTTAAGGAAGCATCCATACCTTTCGAAG
ACTTTTCGAATCAACCCTCAAATGACCATACCCAAGGCGAGAAATCAGAT
GGCCATGGTACAAGTCAGTACAGCAGCAACGACGATTACCGTGGCGGTTA
TTTAAGCTCAGAGTTTAACAGTCGTTGTGTGTTTCAAGACGAACTTGAGG
ATATTCGAACTATGACCTCCGTGTTAGATAAGAAGGAGAAGAAGGGTGTT
GAACCGCGGTCACCCCCAGGTGTCATTGACCTCGAATCAGTACATGAAAG
AAGTACTGCTTGA
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