Ggra3618.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3618.t1
Unique NameGgra3618.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length384
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:323913..325064 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005706915.1
Preferred namePRMT8
PFAMsMethyltransf_25,PrmA
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC02120,RC03388,RC03390
KEGG koko:K11434,ko:K11439
KEGG ReactionR11216,R11217,R11219
KEGG Pathwayko04068,ko04922,map04068,map04922
GOsGO:0000075,GO:0000077,GO:0000166,GO:0000278,GO:0000902,GO:0000904,GO:0001701,GO:0001889,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002684,GO:0003002,GO:0003674,GO:0003676,GO:0003677,GO:0003712,GO:0003713,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006406,GO:0006464,GO:0006479,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006977,GO:0006979,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007552,GO:0007568,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008284,GO:0008327,GO:0008340,GO:0008469,GO:0008757,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009898,GO:0009952,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010259,GO:0010286,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010883,GO:0010948,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016273,GO:0016274,GO:0016275,GO:0016358,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019919,GO:0021532,GO:0021903,GO:0021915,GO:0022008,GO:0022402,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030154,GO:0030182,GO:0030330,GO:0030519,GO:0030917,GO:0031056,GO:0031099,GO:0031100,GO:0031175,GO:0031224,GO:0031225,GO:0031226,GO:0031235,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031554,GO:0031570,GO:0031571,GO:0031667,GO:0031974,GO:0031981,GO:0032091,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033554,GO:0034243,GO:0034613,GO:0034708,GO:0034709,GO:0034969,GO:0035241,GO:0035242,GO:0035246,GO:0035247,GO:0035295,GO:0035556,GO:0036094,GO:0036211,GO:0042054,GO:0042127,GO:0042325,GO:0042326,GO:0042327,GO:0042594,GO:0042770,GO:0042802,GO:0042803,GO:0042886,GO:0043009,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043242,GO:0043244,GO:0043393,GO:0043408,GO:0043410,GO:0043412,GO:0043414,GO:0043565,GO:0043933,GO:0043985,GO:0044020,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044877,GO:0045184,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045638,GO:0045639,GO:0045646,GO:0045648,GO:0045652,GO:0045653,GO:0045786,GO:0045787,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046658,GO:0046907,GO:0046982,GO:0046983,GO:0046984,GO:0046985,GO:0048037,GO:0048273,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051019,GO:0051028,GO:0051093,GO:0051094,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060567,GO:0061008,GO:0061062,GO:0061065,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070727,GO:0071156,GO:0071158,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0097159,GO:0097421,GO:0098552,GO:0098562,GO:0098753,GO:0120036,GO:0120039,GO:0140096,GO:0140110,GO:1900180,GO:1900182,GO:1900744,GO:1900745,GO:1901265,GO:1901363,GO:1901564,GO:1901681,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902275,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1903708,GO:1903827,GO:1903829,GO:1904047,GO:1905909,GO:1905952,GO:1990234,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001141
Evalue1.26e-160
EggNOG OGsCOG0500@1|root,KOG1499@2759|Eukaryota
EC2.1.1.319
Descriptionprotein-arginine omega-N asymmetric methyltransferase activity
COG categoryQ
BRITEko00000,ko00001,ko01000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3618Ggra3618Gracilaria gracilis GNS1m malegenetig00000850_pilon 323913..325064 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3618.t1.stop1Ggra3618.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 323913..323915 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3618.t1.CDS1Ggra3618.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 323913..325064 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3618.t1.exon1Ggra3618.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 323913..325064 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3618.t1.start1Ggra3618.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 325062..325064 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3618.t1Ggra3618.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 323913..325064 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3618.t1 ID=Ggra3618.t1|Name=Ggra3618.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=384bp
MSPATELSAAPSPMPLEPGVHSLKTASQDEAAVESSQQLLNRLLPEDVVP
GVIADADFDMTSSDYYFNSYAHFGIHEEMLKDEVRTRSYMRAIKDNPHLF
EGKTVMDVGCGTGVLSIFAAQAGAKKVYAVECSKIVDQARMIIADNGFSN
VIDVVESKVEDMQLDEKVDIIISEWMGYFLFYESMLDTVLYARDKWLKPG
GLMFPDKATLYLCAIEDAQYKAEKIDFWDNVYGLNMSCIKNVALTEPIVD
TVDPEQVMTNVCAVFPIDTTTVRKEQLSFAVPFSLKGIRNDYAHALVAYF
DIEFSHCLKPVSFVTGPHVKPTHWKQTVLYLDRALPFKQGEVLEGVLACR
PNDKNPRDLDIAIEYSFQGGLTSAKNLLRYRLR*
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spliced messenger RNA

>Ggra3618.t1 ID=Ggra3618.t1|Name=Ggra3618.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1152bp|location=Sequence derived from alignment at tig00000850_pilon:323913..325064- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGCCGGCTACGGAGCTGTCAGCCGCGCCGTCACCCATGCCGCTCGA
GCCCGGCGTTCACTCGCTCAAGACCGCTTCGCAAGATGAGGCCGCTGTGG
AGTCTTCTCAACAGTTGCTCAACCGCCTGTTGCCGGAGGACGTTGTGCCG
GGCGTCATTGCCGACGCCGACTTTGATATGACTTCTTCTGACTATTACTT
CAACTCCTATGCGCACTTTGGAATTCACGAGGAAATGCTCAAGGATGAGG
TGCGTACCCGCAGTTATATGCGCGCCATTAAGGATAACCCGCACTTGTTC
GAGGGCAAGACCGTCATGGACGTTGGCTGTGGCACTGGTGTTCTCAGTAT
CTTCGCCGCCCAGGCGGGCGCCAAGAAGGTGTACGCCGTGGAATGCTCTA
AAATTGTGGACCAGGCGCGCATGATCATCGCCGACAACGGCTTCTCGAAC
GTCATCGACGTCGTGGAGTCCAAGGTGGAGGACATGCAGCTAGATGAGAA
GGTCGACATCATCATCTCCGAGTGGATGGGTTACTTTTTGTTCTATGAGT
CCATGCTAGATACTGTGTTGTACGCGCGCGACAAATGGCTCAAACCGGGC
GGACTCATGTTCCCAGACAAGGCCACGCTGTACCTGTGCGCCATAGAAGA
CGCGCAGTACAAGGCGGAGAAGATCGACTTTTGGGACAACGTATACGGGC
TCAACATGTCGTGCATCAAGAACGTCGCGCTCACGGAGCCCATCGTCGAC
ACGGTGGACCCGGAGCAGGTGATGACCAACGTGTGCGCGGTGTTCCCTAT
TGATACCACCACCGTACGCAAAGAGCAGCTGTCGTTCGCCGTGCCGTTCA
GTCTCAAGGGTATTCGTAACGACTATGCGCATGCTTTGGTGGCCTACTTT
GACATTGAGTTCTCGCATTGTTTGAAGCCGGTGTCGTTCGTGACGGGGCC
GCATGTGAAGCCGACGCACTGGAAGCAGACGGTGCTTTACCTGGATAGAG
CGTTGCCGTTCAAACAAGGCGAGGTGCTAGAGGGTGTTCTGGCTTGTCGA
CCCAATGACAAGAACCCCAGGGATTTGGATATTGCGATCGAGTACAGTTT
TCAGGGAGGACTCACGAGTGCGAAGAACTTGCTGCGATATCGGCTGCGGT
GA
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protein sequence of Ggra3618.t1

>Ggra3618.t1 ID=Ggra3618.t1|Name=Ggra3618.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=384bp
MSPATELSAAPSPMPLEPGVHSLKTASQDEAAVESSQQLLNRLLPEDVVP
GVIADADFDMTSSDYYFNSYAHFGIHEEMLKDEVRTRSYMRAIKDNPHLF
EGKTVMDVGCGTGVLSIFAAQAGAKKVYAVECSKIVDQARMIIADNGFSN
VIDVVESKVEDMQLDEKVDIIISEWMGYFLFYESMLDTVLYARDKWLKPG
GLMFPDKATLYLCAIEDAQYKAEKIDFWDNVYGLNMSCIKNVALTEPIVD
TVDPEQVMTNVCAVFPIDTTTVRKEQLSFAVPFSLKGIRNDYAHALVAYF
DIEFSHCLKPVSFVTGPHVKPTHWKQTVLYLDRALPFKQGEVLEGVLACR
PNDKNPRDLDIAIEYSFQGGLTSAKNLLRYRLR*
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mRNA from alignment at tig00000850_pilon:323913..325064-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3618.t1 ID=Ggra3618.t1|Name=Ggra3618.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1152bp|location=Sequence derived from alignment at tig00000850_pilon:323913..325064- (Gracilaria gracilis GNS1m male)
ATGTCGCCGGCTACGGAGCTGTCAGCCGCGCCGTCACCCATGCCGCTCGA
GCCCGGCGTTCACTCGCTCAAGACCGCTTCGCAAGATGAGGCCGCTGTGG
AGTCTTCTCAACAGTTGCTCAACCGCCTGTTGCCGGAGGACGTTGTGCCG
GGCGTCATTGCCGACGCCGACTTTGATATGACTTCTTCTGACTATTACTT
CAACTCCTATGCGCACTTTGGAATTCACGAGGAAATGCTCAAGGATGAGG
TGCGTACCCGCAGTTATATGCGCGCCATTAAGGATAACCCGCACTTGTTC
GAGGGCAAGACCGTCATGGACGTTGGCTGTGGCACTGGTGTTCTCAGTAT
CTTCGCCGCCCAGGCGGGCGCCAAGAAGGTGTACGCCGTGGAATGCTCTA
AAATTGTGGACCAGGCGCGCATGATCATCGCCGACAACGGCTTCTCGAAC
GTCATCGACGTCGTGGAGTCCAAGGTGGAGGACATGCAGCTAGATGAGAA
GGTCGACATCATCATCTCCGAGTGGATGGGTTACTTTTTGTTCTATGAGT
CCATGCTAGATACTGTGTTGTACGCGCGCGACAAATGGCTCAAACCGGGC
GGACTCATGTTCCCAGACAAGGCCACGCTGTACCTGTGCGCCATAGAAGA
CGCGCAGTACAAGGCGGAGAAGATCGACTTTTGGGACAACGTATACGGGC
TCAACATGTCGTGCATCAAGAACGTCGCGCTCACGGAGCCCATCGTCGAC
ACGGTGGACCCGGAGCAGGTGATGACCAACGTGTGCGCGGTGTTCCCTAT
TGATACCACCACCGTACGCAAAGAGCAGCTGTCGTTCGCCGTGCCGTTCA
GTCTCAAGGGTATTCGTAACGACTATGCGCATGCTTTGGTGGCCTACTTT
GACATTGAGTTCTCGCATTGTTTGAAGCCGGTGTCGTTCGTGACGGGGCC
GCATGTGAAGCCGACGCACTGGAAGCAGACGGTGCTTTACCTGGATAGAG
CGTTGCCGTTCAAACAAGGCGAGGTGCTAGAGGGTGTTCTGGCTTGTCGA
CCCAATGACAAGAACCCCAGGGATTTGGATATTGCGATCGAGTACAGTTT
TCAGGGAGGACTCACGAGTGCGAAGAACTTGCTGCGATATCGGCTGCGGT
GA
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Coding sequence (CDS) from alignment at tig00000850_pilon:323913..325064-

>Ggra3618.t1 ID=Ggra3618.t1|Name=Ggra3618.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1152bp|location=Sequence derived from alignment at tig00000850_pilon:323913..325064- (Gracilaria gracilis GNS1m male)
ATGTCGCCGGCTACGGAGCTGTCAGCCGCGCCGTCACCCATGCCGCTCGA
GCCCGGCGTTCACTCGCTCAAGACCGCTTCGCAAGATGAGGCCGCTGTGG
AGTCTTCTCAACAGTTGCTCAACCGCCTGTTGCCGGAGGACGTTGTGCCG
GGCGTCATTGCCGACGCCGACTTTGATATGACTTCTTCTGACTATTACTT
CAACTCCTATGCGCACTTTGGAATTCACGAGGAAATGCTCAAGGATGAGG
TGCGTACCCGCAGTTATATGCGCGCCATTAAGGATAACCCGCACTTGTTC
GAGGGCAAGACCGTCATGGACGTTGGCTGTGGCACTGGTGTTCTCAGTAT
CTTCGCCGCCCAGGCGGGCGCCAAGAAGGTGTACGCCGTGGAATGCTCTA
AAATTGTGGACCAGGCGCGCATGATCATCGCCGACAACGGCTTCTCGAAC
GTCATCGACGTCGTGGAGTCCAAGGTGGAGGACATGCAGCTAGATGAGAA
GGTCGACATCATCATCTCCGAGTGGATGGGTTACTTTTTGTTCTATGAGT
CCATGCTAGATACTGTGTTGTACGCGCGCGACAAATGGCTCAAACCGGGC
GGACTCATGTTCCCAGACAAGGCCACGCTGTACCTGTGCGCCATAGAAGA
CGCGCAGTACAAGGCGGAGAAGATCGACTTTTGGGACAACGTATACGGGC
TCAACATGTCGTGCATCAAGAACGTCGCGCTCACGGAGCCCATCGTCGAC
ACGGTGGACCCGGAGCAGGTGATGACCAACGTGTGCGCGGTGTTCCCTAT
TGATACCACCACCGTACGCAAAGAGCAGCTGTCGTTCGCCGTGCCGTTCA
GTCTCAAGGGTATTCGTAACGACTATGCGCATGCTTTGGTGGCCTACTTT
GACATTGAGTTCTCGCATTGTTTGAAGCCGGTGTCGTTCGTGACGGGGCC
GCATGTGAAGCCGACGCACTGGAAGCAGACGGTGCTTTACCTGGATAGAG
CGTTGCCGTTCAAACAAGGCGAGGTGCTAGAGGGTGTTCTGGCTTGTCGA
CCCAATGACAAGAACCCCAGGGATTTGGATATTGCGATCGAGTACAGTTT
TCAGGGAGGACTCACGAGTGCGAAGAACTTGCTGCGATATCGGCTGCGGT
GA
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