Ggra3600.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3600.t1
Unique NameGgra3600.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length201
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:227728..228330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3600Ggra3600Gracilaria gracilis GNS1m malegenetig00000850_pilon 227728..228330 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3600.t1.start1Ggra3600.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 227728..227730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3600.t1.CDS1Ggra3600.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 227728..228330 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3600.t1.exon1Ggra3600.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 227728..228330 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3600.t1.stop1Ggra3600.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 228328..228330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3600.t1Ggra3600.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 227728..228330 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3600.t1 ID=Ggra3600.t1|Name=Ggra3600.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=201bp
MVFNIALVTGFRKNELNKLRLQDVTKVTEGIESVFRISGRIGSSDGASKT
QLGGIKYLNSMPKEIFVWNREQLNGLVNVYADLGEYVALISGLREGQEKF
FCAVNYRGNTPSSFFKPQNISGSTFVRYITEAFTTNKITGVGVRRSMTLH
GLRSTVITQLFNAGMGYASVALRSGHRDHRSFLSYINLRGTLGKRQQEGF
*
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spliced messenger RNA

>Ggra3600.t1 ID=Ggra3600.t1|Name=Ggra3600.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=603bp|location=Sequence derived from alignment at tig00000850_pilon:227728..228330+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGTTCAACATTGCCTTGGTGACGGGCTTTCGAAAAAATGAATTGAA
TAAACTGCGTCTGCAGGACGTTACGAAAGTGACGGAAGGTATTGAAAGTG
TTTTCCGAATTAGCGGACGCATAGGAAGCTCAGACGGAGCCTCAAAGACC
CAATTAGGAGGCATCAAGTATCTTAACTCGATGCCAAAAGAAATTTTTGT
TTGGAATCGTGAACAGCTCAACGGGTTGGTTAATGTGTACGCCGATCTGG
GAGAATACGTCGCCCTCATTTCTGGACTTAGGGAGGGCCAGGAAAAGTTT
TTCTGTGCTGTGAATTATAGAGGTAACACGCCGTCGTCATTTTTCAAGCC
GCAGAACATCAGTGGTAGCACTTTTGTCCGCTATATTACAGAGGCGTTCA
CTACGAATAAGATCACTGGTGTTGGTGTCCGTCGTTCTATGACGCTACAT
GGCTTACGGTCTACTGTGATCACGCAATTGTTTAACGCAGGAATGGGATA
CGCAAGTGTAGCATTGCGATCCGGTCATCGCGATCATCGTTCATTTTTGT
CTTACATCAATTTGCGTGGAACACTGGGTAAACGTCAGCAGGAGGGATTC
TGA
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protein sequence of Ggra3600.t1

>Ggra3600.t1 ID=Ggra3600.t1|Name=Ggra3600.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=201bp
MVFNIALVTGFRKNELNKLRLQDVTKVTEGIESVFRISGRIGSSDGASKT
QLGGIKYLNSMPKEIFVWNREQLNGLVNVYADLGEYVALISGLREGQEKF
FCAVNYRGNTPSSFFKPQNISGSTFVRYITEAFTTNKITGVGVRRSMTLH
GLRSTVITQLFNAGMGYASVALRSGHRDHRSFLSYINLRGTLGKRQQEGF
*
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mRNA from alignment at tig00000850_pilon:227728..228330+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3600.t1 ID=Ggra3600.t1|Name=Ggra3600.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=603bp|location=Sequence derived from alignment at tig00000850_pilon:227728..228330+ (Gracilaria gracilis GNS1m male)
ATGGTGTTCAACATTGCCTTGGTGACGGGCTTTCGAAAAAATGAATTGAA
TAAACTGCGTCTGCAGGACGTTACGAAAGTGACGGAAGGTATTGAAAGTG
TTTTCCGAATTAGCGGACGCATAGGAAGCTCAGACGGAGCCTCAAAGACC
CAATTAGGAGGCATCAAGTATCTTAACTCGATGCCAAAAGAAATTTTTGT
TTGGAATCGTGAACAGCTCAACGGGTTGGTTAATGTGTACGCCGATCTGG
GAGAATACGTCGCCCTCATTTCTGGACTTAGGGAGGGCCAGGAAAAGTTT
TTCTGTGCTGTGAATTATAGAGGTAACACGCCGTCGTCATTTTTCAAGCC
GCAGAACATCAGTGGTAGCACTTTTGTCCGCTATATTACAGAGGCGTTCA
CTACGAATAAGATCACTGGTGTTGGTGTCCGTCGTTCTATGACGCTACAT
GGCTTACGGTCTACTGTGATCACGCAATTGTTTAACGCAGGAATGGGATA
CGCAAGTGTAGCATTGCGATCCGGTCATCGCGATCATCGTTCATTTTTGT
CTTACATCAATTTGCGTGGAACACTGGGTAAACGTCAGCAGGAGGGATTC
TGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:227728..228330+

>Ggra3600.t1 ID=Ggra3600.t1|Name=Ggra3600.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=603bp|location=Sequence derived from alignment at tig00000850_pilon:227728..228330+ (Gracilaria gracilis GNS1m male)
ATGGTGTTCAACATTGCCTTGGTGACGGGCTTTCGAAAAAATGAATTGAA
TAAACTGCGTCTGCAGGACGTTACGAAAGTGACGGAAGGTATTGAAAGTG
TTTTCCGAATTAGCGGACGCATAGGAAGCTCAGACGGAGCCTCAAAGACC
CAATTAGGAGGCATCAAGTATCTTAACTCGATGCCAAAAGAAATTTTTGT
TTGGAATCGTGAACAGCTCAACGGGTTGGTTAATGTGTACGCCGATCTGG
GAGAATACGTCGCCCTCATTTCTGGACTTAGGGAGGGCCAGGAAAAGTTT
TTCTGTGCTGTGAATTATAGAGGTAACACGCCGTCGTCATTTTTCAAGCC
GCAGAACATCAGTGGTAGCACTTTTGTCCGCTATATTACAGAGGCGTTCA
CTACGAATAAGATCACTGGTGTTGGTGTCCGTCGTTCTATGACGCTACAT
GGCTTACGGTCTACTGTGATCACGCAATTGTTTAACGCAGGAATGGGATA
CGCAAGTGTAGCATTGCGATCCGGTCATCGCGATCATCGTTCATTTTTGT
CTTACATCAATTTGCGTGGAACACTGGGTAAACGTCAGCAGGAGGGATTC
TGA
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