Ggra36.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra36.t1
Unique NameGgra36.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000967_piloncontigtig00000967_pilon:18562..19677 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra36Ggra36Gracilaria gracilis GNS1m malegenetig00000967_pilon 18562..19677 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra36.t1.start1Ggra36.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000967_pilon 18562..18564 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra36.t1.CDS1Ggra36.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000967_pilon 18562..19677 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra36.t1.exon1Ggra36.t1.exon1Gracilaria gracilis GNS1m maleexontig00000967_pilon 18562..19677 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra36.t1.stop1Ggra36.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000967_pilon 19675..19677 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra36.t1Ggra36.t1Gracilaria gracilis GNS1m malepolypeptidetig00000967_pilon 18562..19677 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra36.t1 ID=Ggra36.t1|Name=Ggra36.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp
MVFVSGFGKDILCIDGYLISSSVFQEWSGKTFQISRDLTEENAELANLSR
KHGHPEHGLILKVKHISNHDKTEEEDLKNRIEIQKIEMDVLATLSERNDS
VPGSSVVESWVAGLTLRYWQATATVFGFLDMSEEERRKVFEEKVYLPGAE
EMETMSTSLWCWYPSCIPDSLTSFLKHMEGRSFGRDEASFAMSEIHPALG
GFYIVKLLKSGTSRDQCEVEYMDKTNSVQQGYVQTGNSSNVAFTSAEWKS
RTKVLCTLKQFIKHRQTSQHKVRMLNWGCTGMDNLQTMFFFPLRMIPNGM
YGPVRSSTVPDDIQLFSKLSRSTKKLPQVVFKGIRCDAEENMSDLFDFGI
VLNYSERNEETAEPFMKKQKT*
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spliced messenger RNA

>Ggra36.t1 ID=Ggra36.t1|Name=Ggra36.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000967_pilon:18562..19677+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTTTCGTTAGTGGATTTGGTAAGGATATACTTTGCATTGATGGATA
CTTAATCTCATCCTCTGTTTTTCAAGAATGGTCAGGAAAAACGTTTCAAA
TCAGCAGAGATCTTACAGAAGAAAACGCAGAACTTGCGAATCTCTCTAGG
AAGCATGGGCATCCAGAGCATGGGCTAATTTTAAAGGTCAAACATATAAG
CAACCACGACAAAACTGAAGAGGAAGATCTTAAGAACAGAATTGAGATAC
AGAAAATCGAAATGGATGTCCTGGCCACTCTTTCTGAAAGAAATGATTCT
GTCCCTGGTTCTTCGGTGGTTGAGAGCTGGGTGGCTGGCCTCACCCTACG
ATACTGGCAAGCAACTGCGACAGTATTTGGATTTTTGGATATGTCAGAAG
AAGAACGTAGGAAAGTTTTCGAGGAAAAGGTCTACCTTCCGGGAGCTGAA
GAAATGGAGACAATGTCCACCTCTCTATGGTGCTGGTATCCATCTTGCAT
TCCAGACAGCCTCACGTCGTTCTTGAAACATATGGAGGGTAGATCATTTG
GACGGGATGAAGCCAGTTTTGCAATGAGCGAAATCCATCCCGCTCTCGGT
GGGTTTTATATTGTGAAGCTCCTCAAATCAGGGACAAGCAGAGATCAGTG
CGAAGTTGAGTACATGGATAAGACCAATAGTGTTCAGCAGGGGTATGTTC
AAACCGGGAATTCTTCAAATGTTGCGTTCACTTCCGCTGAATGGAAGTCA
AGAACCAAAGTTCTTTGCACCCTCAAGCAGTTTATCAAGCATCGCCAAAC
ATCTCAACACAAAGTAAGAATGTTGAACTGGGGTTGCACAGGAATGGATA
ATCTCCAGACAATGTTTTTCTTCCCCCTTCGTATGATACCCAACGGGATG
TATGGCCCTGTTAGATCCTCCACAGTACCAGATGATATCCAGTTATTTTC
TAAGTTATCTAGAAGTACAAAGAAACTACCGCAAGTAGTGTTTAAGGGAA
TTCGGTGCGACGCTGAAGAAAATATGTCCGATTTATTTGATTTTGGGATT
GTGCTAAACTATTCTGAGAGGAACGAAGAGACGGCTGAACCATTTATGAA
GAAGCAAAAGACTTGA
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protein sequence of Ggra36.t1

>Ggra36.t1 ID=Ggra36.t1|Name=Ggra36.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MVFVSGFGKDILCIDGYLISSSVFQEWSGKTFQISRDLTEENAELANLSR
KHGHPEHGLILKVKHISNHDKTEEEDLKNRIEIQKIEMDVLATLSERNDS
VPGSSVVESWVAGLTLRYWQATATVFGFLDMSEEERRKVFEEKVYLPGAE
EMETMSTSLWCWYPSCIPDSLTSFLKHMEGRSFGRDEASFAMSEIHPALG
GFYIVKLLKSGTSRDQCEVEYMDKTNSVQQGYVQTGNSSNVAFTSAEWKS
RTKVLCTLKQFIKHRQTSQHKVRMLNWGCTGMDNLQTMFFFPLRMIPNGM
YGPVRSSTVPDDIQLFSKLSRSTKKLPQVVFKGIRCDAEENMSDLFDFGI
VLNYSERNEETAEPFMKKQKT*
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mRNA from alignment at tig00000967_pilon:18562..19677+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra36.t1 ID=Ggra36.t1|Name=Ggra36.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000967_pilon:18562..19677+ (Gracilaria gracilis GNS1m male)
ATGGTTTTCGTTAGTGGATTTGGTAAGGATATACTTTGCATTGATGGATA
CTTAATCTCATCCTCTGTTTTTCAAGAATGGTCAGGAAAAACGTTTCAAA
TCAGCAGAGATCTTACAGAAGAAAACGCAGAACTTGCGAATCTCTCTAGG
AAGCATGGGCATCCAGAGCATGGGCTAATTTTAAAGGTCAAACATATAAG
CAACCACGACAAAACTGAAGAGGAAGATCTTAAGAACAGAATTGAGATAC
AGAAAATCGAAATGGATGTCCTGGCCACTCTTTCTGAAAGAAATGATTCT
GTCCCTGGTTCTTCGGTGGTTGAGAGCTGGGTGGCTGGCCTCACCCTACG
ATACTGGCAAGCAACTGCGACAGTATTTGGATTTTTGGATATGTCAGAAG
AAGAACGTAGGAAAGTTTTCGAGGAAAAGGTCTACCTTCCGGGAGCTGAA
GAAATGGAGACAATGTCCACCTCTCTATGGTGCTGGTATCCATCTTGCAT
TCCAGACAGCCTCACGTCGTTCTTGAAACATATGGAGGGTAGATCATTTG
GACGGGATGAAGCCAGTTTTGCAATGAGCGAAATCCATCCCGCTCTCGGT
GGGTTTTATATTGTGAAGCTCCTCAAATCAGGGACAAGCAGAGATCAGTG
CGAAGTTGAGTACATGGATAAGACCAATAGTGTTCAGCAGGGGTATGTTC
AAACCGGGAATTCTTCAAATGTTGCGTTCACTTCCGCTGAATGGAAGTCA
AGAACCAAAGTTCTTTGCACCCTCAAGCAGTTTATCAAGCATCGCCAAAC
ATCTCAACACAAAGTAAGAATGTTGAACTGGGGTTGCACAGGAATGGATA
ATCTCCAGACAATGTTTTTCTTCCCCCTTCGTATGATACCCAACGGGATG
TATGGCCCTGTTAGATCCTCCACAGTACCAGATGATATCCAGTTATTTTC
TAAGTTATCTAGAAGTACAAAGAAACTACCGCAAGTAGTGTTTAAGGGAA
TTCGGTGCGACGCTGAAGAAAATATGTCCGATTTATTTGATTTTGGGATT
GTGCTAAACTATTCTGAGAGGAACGAAGAGACGGCTGAACCATTTATGAA
GAAGCAAAAGACTTGA
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Coding sequence (CDS) from alignment at tig00000967_pilon:18562..19677+

>Ggra36.t1 ID=Ggra36.t1|Name=Ggra36.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1116bp|location=Sequence derived from alignment at tig00000967_pilon:18562..19677+ (Gracilaria gracilis GNS1m male)
ATGGTTTTCGTTAGTGGATTTGGTAAGGATATACTTTGCATTGATGGATA
CTTAATCTCATCCTCTGTTTTTCAAGAATGGTCAGGAAAAACGTTTCAAA
TCAGCAGAGATCTTACAGAAGAAAACGCAGAACTTGCGAATCTCTCTAGG
AAGCATGGGCATCCAGAGCATGGGCTAATTTTAAAGGTCAAACATATAAG
CAACCACGACAAAACTGAAGAGGAAGATCTTAAGAACAGAATTGAGATAC
AGAAAATCGAAATGGATGTCCTGGCCACTCTTTCTGAAAGAAATGATTCT
GTCCCTGGTTCTTCGGTGGTTGAGAGCTGGGTGGCTGGCCTCACCCTACG
ATACTGGCAAGCAACTGCGACAGTATTTGGATTTTTGGATATGTCAGAAG
AAGAACGTAGGAAAGTTTTCGAGGAAAAGGTCTACCTTCCGGGAGCTGAA
GAAATGGAGACAATGTCCACCTCTCTATGGTGCTGGTATCCATCTTGCAT
TCCAGACAGCCTCACGTCGTTCTTGAAACATATGGAGGGTAGATCATTTG
GACGGGATGAAGCCAGTTTTGCAATGAGCGAAATCCATCCCGCTCTCGGT
GGGTTTTATATTGTGAAGCTCCTCAAATCAGGGACAAGCAGAGATCAGTG
CGAAGTTGAGTACATGGATAAGACCAATAGTGTTCAGCAGGGGTATGTTC
AAACCGGGAATTCTTCAAATGTTGCGTTCACTTCCGCTGAATGGAAGTCA
AGAACCAAAGTTCTTTGCACCCTCAAGCAGTTTATCAAGCATCGCCAAAC
ATCTCAACACAAAGTAAGAATGTTGAACTGGGGTTGCACAGGAATGGATA
ATCTCCAGACAATGTTTTTCTTCCCCCTTCGTATGATACCCAACGGGATG
TATGGCCCTGTTAGATCCTCCACAGTACCAGATGATATCCAGTTATTTTC
TAAGTTATCTAGAAGTACAAAGAAACTACCGCAAGTAGTGTTTAAGGGAA
TTCGGTGCGACGCTGAAGAAAATATGTCCGATTTATTTGATTTTGGGATT
GTGCTAAACTATTCTGAGAGGAACGAAGAGACGGCTGAACCATTTATGAA
GAAGCAAAAGACTTGA
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