Ggra3595.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3595.t1
Unique NameGgra3595.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length392
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:204474..205649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3595Ggra3595Gracilaria gracilis GNS1m malegenetig00000850_pilon 204474..205649 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3595.t1.stop1Ggra3595.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 204474..204476 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3595.t1.CDS1Ggra3595.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 204474..205649 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3595.t1.exon1Ggra3595.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 204474..205649 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3595.t1.start1Ggra3595.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 205647..205649 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3595.t1Ggra3595.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 204474..205649 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3595.t1 ID=Ggra3595.t1|Name=Ggra3595.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=392bp
MAEQPNASIAEKNAALRRGTRNRIAKRRPDFVDPFSLRKKRKTKGEGDEL
LSALSPCSEEGNLKVKLPQSLSNQDSTEKKHHSSSFEGEKTISEVVHSLP
TSNPKVRVIIRRKPQPVVPKTVSLKFVPNEEVPREKAVVKLRLRVRPPQA
KLDSNLLENLPTCGRRQQADTVPNSSSKVGKSEGEDSPCRALRKSPRNKS
PRSKSPLSMSPRKVITKVKLLVSPRPVEKSSSLDNEQNSPDRSQRKVVES
SQKPQKKKRNSVRVEALEDSSCTQAPTKALPSIEDDTKHSKVHDAVPEHK
RLQAELEPRKHVKGTFNAVDVEQLSTQSSVNGKVKDESKLDSNTSKMDVK
LALRENSLPLRKRPYMREERASSSPVLRRSTRNRQRNGYSR*
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spliced messenger RNA

>Ggra3595.t1 ID=Ggra3595.t1|Name=Ggra3595.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00000850_pilon:204474..205649- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGAACAACCAAACGCTTCCATTGCCGAGAAGAATGCCGCGTTAAG
GCGGGGGACTAGAAACCGGATCGCCAAAAGAAGACCGGACTTCGTAGACC
CCTTCTCCCTTCGAAAGAAACGCAAAACGAAGGGCGAAGGGGACGAATTG
TTGAGTGCACTCTCGCCTTGCTCGGAAGAAGGGAATTTGAAGGTAAAGCT
GCCTCAAAGCCTTTCAAACCAAGACTCGACGGAGAAGAAGCACCACTCAT
CAAGCTTCGAAGGAGAGAAAACCATTTCTGAAGTGGTGCACAGCCTTCCG
ACATCGAACCCGAAGGTAAGGGTGATTATCCGAAGAAAACCGCAACCAGT
AGTTCCCAAGACTGTTTCGCTGAAGTTTGTTCCCAACGAAGAGGTACCCA
GAGAAAAGGCCGTTGTGAAACTCCGCCTTCGGGTTAGGCCTCCGCAAGCC
AAACTTGATTCGAATCTTCTTGAAAACCTTCCGACTTGCGGCCGACGGCA
ACAAGCTGACACGGTACCCAATTCCAGCAGCAAAGTCGGAAAAAGTGAGG
GCGAGGACAGCCCTTGCAGGGCCCTGCGCAAGAGTCCGCGCAATAAGAGC
CCGCGCAGCAAGAGCCCGCTCAGCATGAGTCCGCGCAAGGTAATCACGAA
GGTGAAGCTTCTAGTTTCTCCAAGACCAGTGGAGAAGAGTAGTTCGCTCG
ATAATGAACAGAACTCTCCTGATCGCTCTCAACGAAAGGTTGTAGAGTCG
AGTCAGAAGCCCCAAAAGAAGAAACGAAACTCCGTTCGAGTTGAAGCTTT
GGAAGACTCATCCTGTACTCAAGCACCGACCAAAGCCTTACCTTCAATCG
AAGATGACACTAAGCATTCAAAAGTGCATGATGCAGTGCCAGAACACAAA
AGACTCCAAGCAGAGTTGGAACCAAGGAAACATGTCAAGGGAACATTTAA
TGCCGTGGATGTGGAACAGCTGAGCACGCAGAGTTCTGTAAACGGCAAGG
TAAAAGACGAGTCAAAGCTGGACTCTAATACTTCGAAGATGGATGTGAAG
CTCGCGCTACGGGAAAACTCGCTTCCTCTCCGCAAGAGGCCCTACATGCG
TGAGGAAAGGGCGTCATCCTCCCCAGTATTGAGGAGAAGTACGAGGAATA
GACAAAGAAACGGCTACTCGAGGTGA
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protein sequence of Ggra3595.t1

>Ggra3595.t1 ID=Ggra3595.t1|Name=Ggra3595.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=392bp
MAEQPNASIAEKNAALRRGTRNRIAKRRPDFVDPFSLRKKRKTKGEGDEL
LSALSPCSEEGNLKVKLPQSLSNQDSTEKKHHSSSFEGEKTISEVVHSLP
TSNPKVRVIIRRKPQPVVPKTVSLKFVPNEEVPREKAVVKLRLRVRPPQA
KLDSNLLENLPTCGRRQQADTVPNSSSKVGKSEGEDSPCRALRKSPRNKS
PRSKSPLSMSPRKVITKVKLLVSPRPVEKSSSLDNEQNSPDRSQRKVVES
SQKPQKKKRNSVRVEALEDSSCTQAPTKALPSIEDDTKHSKVHDAVPEHK
RLQAELEPRKHVKGTFNAVDVEQLSTQSSVNGKVKDESKLDSNTSKMDVK
LALRENSLPLRKRPYMREERASSSPVLRRSTRNRQRNGYSR*
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mRNA from alignment at tig00000850_pilon:204474..205649-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3595.t1 ID=Ggra3595.t1|Name=Ggra3595.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00000850_pilon:204474..205649- (Gracilaria gracilis GNS1m male)
ATGGCCGAACAACCAAACGCTTCCATTGCCGAGAAGAATGCCGCGTTAAG
GCGGGGGACTAGAAACCGGATCGCCAAAAGAAGACCGGACTTCGTAGACC
CCTTCTCCCTTCGAAAGAAACGCAAAACGAAGGGCGAAGGGGACGAATTG
TTGAGTGCACTCTCGCCTTGCTCGGAAGAAGGGAATTTGAAGGTAAAGCT
GCCTCAAAGCCTTTCAAACCAAGACTCGACGGAGAAGAAGCACCACTCAT
CAAGCTTCGAAGGAGAGAAAACCATTTCTGAAGTGGTGCACAGCCTTCCG
ACATCGAACCCGAAGGTAAGGGTGATTATCCGAAGAAAACCGCAACCAGT
AGTTCCCAAGACTGTTTCGCTGAAGTTTGTTCCCAACGAAGAGGTACCCA
GAGAAAAGGCCGTTGTGAAACTCCGCCTTCGGGTTAGGCCTCCGCAAGCC
AAACTTGATTCGAATCTTCTTGAAAACCTTCCGACTTGCGGCCGACGGCA
ACAAGCTGACACGGTACCCAATTCCAGCAGCAAAGTCGGAAAAAGTGAGG
GCGAGGACAGCCCTTGCAGGGCCCTGCGCAAGAGTCCGCGCAATAAGAGC
CCGCGCAGCAAGAGCCCGCTCAGCATGAGTCCGCGCAAGGTAATCACGAA
GGTGAAGCTTCTAGTTTCTCCAAGACCAGTGGAGAAGAGTAGTTCGCTCG
ATAATGAACAGAACTCTCCTGATCGCTCTCAACGAAAGGTTGTAGAGTCG
AGTCAGAAGCCCCAAAAGAAGAAACGAAACTCCGTTCGAGTTGAAGCTTT
GGAAGACTCATCCTGTACTCAAGCACCGACCAAAGCCTTACCTTCAATCG
AAGATGACACTAAGCATTCAAAAGTGCATGATGCAGTGCCAGAACACAAA
AGACTCCAAGCAGAGTTGGAACCAAGGAAACATGTCAAGGGAACATTTAA
TGCCGTGGATGTGGAACAGCTGAGCACGCAGAGTTCTGTAAACGGCAAGG
TAAAAGACGAGTCAAAGCTGGACTCTAATACTTCGAAGATGGATGTGAAG
CTCGCGCTACGGGAAAACTCGCTTCCTCTCCGCAAGAGGCCCTACATGCG
TGAGGAAAGGGCGTCATCCTCCCCAGTATTGAGGAGAAGTACGAGGAATA
GACAAAGAAACGGCTACTCGAGGTGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:204474..205649-

>Ggra3595.t1 ID=Ggra3595.t1|Name=Ggra3595.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1176bp|location=Sequence derived from alignment at tig00000850_pilon:204474..205649- (Gracilaria gracilis GNS1m male)
ATGGCCGAACAACCAAACGCTTCCATTGCCGAGAAGAATGCCGCGTTAAG
GCGGGGGACTAGAAACCGGATCGCCAAAAGAAGACCGGACTTCGTAGACC
CCTTCTCCCTTCGAAAGAAACGCAAAACGAAGGGCGAAGGGGACGAATTG
TTGAGTGCACTCTCGCCTTGCTCGGAAGAAGGGAATTTGAAGGTAAAGCT
GCCTCAAAGCCTTTCAAACCAAGACTCGACGGAGAAGAAGCACCACTCAT
CAAGCTTCGAAGGAGAGAAAACCATTTCTGAAGTGGTGCACAGCCTTCCG
ACATCGAACCCGAAGGTAAGGGTGATTATCCGAAGAAAACCGCAACCAGT
AGTTCCCAAGACTGTTTCGCTGAAGTTTGTTCCCAACGAAGAGGTACCCA
GAGAAAAGGCCGTTGTGAAACTCCGCCTTCGGGTTAGGCCTCCGCAAGCC
AAACTTGATTCGAATCTTCTTGAAAACCTTCCGACTTGCGGCCGACGGCA
ACAAGCTGACACGGTACCCAATTCCAGCAGCAAAGTCGGAAAAAGTGAGG
GCGAGGACAGCCCTTGCAGGGCCCTGCGCAAGAGTCCGCGCAATAAGAGC
CCGCGCAGCAAGAGCCCGCTCAGCATGAGTCCGCGCAAGGTAATCACGAA
GGTGAAGCTTCTAGTTTCTCCAAGACCAGTGGAGAAGAGTAGTTCGCTCG
ATAATGAACAGAACTCTCCTGATCGCTCTCAACGAAAGGTTGTAGAGTCG
AGTCAGAAGCCCCAAAAGAAGAAACGAAACTCCGTTCGAGTTGAAGCTTT
GGAAGACTCATCCTGTACTCAAGCACCGACCAAAGCCTTACCTTCAATCG
AAGATGACACTAAGCATTCAAAAGTGCATGATGCAGTGCCAGAACACAAA
AGACTCCAAGCAGAGTTGGAACCAAGGAAACATGTCAAGGGAACATTTAA
TGCCGTGGATGTGGAACAGCTGAGCACGCAGAGTTCTGTAAACGGCAAGG
TAAAAGACGAGTCAAAGCTGGACTCTAATACTTCGAAGATGGATGTGAAG
CTCGCGCTACGGGAAAACTCGCTTCCTCTCCGCAAGAGGCCCTACATGCG
TGAGGAAAGGGCGTCATCCTCCCCAGTATTGAGGAGAAGTACGAGGAATA
GACAAAGAAACGGCTACTCGAGGTGA
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