Ggra3588.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3588.t1
Unique NameGgra3588.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length393
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:182775..183953 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3588Ggra3588Gracilaria gracilis GNS1m malegenetig00000850_pilon 182775..183953 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3588.t1.start1Ggra3588.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 182775..182777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3588.t1.CDS1Ggra3588.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 182775..183953 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3588.t1.exon1Ggra3588.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 182775..183953 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3588.t1.stop1Ggra3588.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 183951..183953 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3588.t1Ggra3588.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 182775..183953 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3588.t1 ID=Ggra3588.t1|Name=Ggra3588.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=393bp
MSASSSSGESDLSSHMSVGKLALFSVRFAPDGVHYENEYMAQTVQNLDDI
PHFMAAKRYEALPSEEYKALNDSICKIWSAFLATDFRVNGDKSCVNEAVG
HSTYSNVDAGDGMLARVSETCAIQGRIVGPDDAYPHLTKVVSDERCDVVQ
LRTGVTYIIHGDSEGDARPALSQMYILSLRESLLRLGITEFCHPPYSHRV
WSIKGSRLVGTMNNALGRLCNEHCAAQCDNVGCLNGQKRAVKYMYVKSDN
PLKVYDFGTRYDPLGAKYAQQHDDLRKVLKKANPARVTRKRLLRTLMVFK
RLQQTLSANKCWVLPGNGDEGTFNPGEPFLKANATYLWDLYPHDADGDAV
SLWDGGKVRVTTYGQVAHVCTKNGSLLEPGTQNFAWAGHVQR*
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spliced messenger RNA

>Ggra3588.t1 ID=Ggra3588.t1|Name=Ggra3588.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1179bp|location=Sequence derived from alignment at tig00000850_pilon:182775..183953+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTGCTTCGTCAAGTTCTGGTGAAAGCGACTTATCGTCGCACATGTC
TGTAGGCAAGCTGGCGCTCTTTTCAGTGAGATTCGCACCCGATGGGGTGC
ACTACGAAAATGAGTACATGGCTCAAACCGTGCAGAACCTCGACGATATT
CCACACTTCATGGCCGCCAAACGTTATGAGGCACTACCCTCAGAAGAATA
TAAAGCGCTCAACGACTCGATCTGCAAGATTTGGAGCGCGTTTCTTGCCA
CCGACTTTAGAGTGAACGGCGACAAGTCTTGCGTGAATGAGGCAGTTGGC
CACAGCACGTATTCGAATGTTGACGCCGGAGACGGCATGTTAGCAAGGGT
TTCAGAGACGTGCGCCATCCAAGGGCGAATTGTTGGTCCAGATGATGCGT
ATCCGCATCTGACCAAAGTTGTGTCAGATGAGAGGTGCGATGTGGTGCAA
TTGAGAACCGGAGTGACGTACATTATTCACGGAGACTCTGAAGGTGACGC
TCGGCCAGCTCTCTCTCAAATGTACATACTCAGTCTCCGTGAGAGTCTTT
TGCGGCTAGGCATCACTGAGTTTTGTCATCCGCCATATTCGCACAGAGTG
TGGAGCATAAAGGGAAGTAGACTTGTTGGAACCATGAACAACGCGCTGGG
ACGGCTTTGCAACGAGCACTGCGCTGCACAGTGTGACAACGTAGGGTGCC
TCAACGGACAAAAGCGGGCCGTCAAGTATATGTACGTGAAGAGCGATAAC
CCTCTAAAGGTATACGATTTTGGTACGAGATATGATCCGTTGGGGGCGAA
GTATGCTCAGCAGCACGACGATTTACGAAAAGTGCTAAAGAAGGCAAACC
CAGCTCGAGTAACTCGAAAGAGGCTTTTGCGGACTTTGATGGTCTTCAAG
AGACTTCAACAAACGCTTTCGGCCAACAAATGTTGGGTGCTTCCCGGCAA
CGGCGACGAGGGAACATTCAACCCCGGGGAGCCTTTCTTGAAGGCGAACG
CGACGTACTTGTGGGATCTGTATCCGCATGATGCGGACGGGGATGCGGTG
TCGCTGTGGGACGGTGGAAAAGTGCGTGTTACTACATATGGGCAAGTGGC
TCATGTTTGCACGAAAAACGGATCACTTCTTGAGCCGGGAACGCAGAACT
TTGCATGGGCGGGGCACGTGCAGCGGTGA
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protein sequence of Ggra3588.t1

>Ggra3588.t1 ID=Ggra3588.t1|Name=Ggra3588.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=393bp
MSASSSSGESDLSSHMSVGKLALFSVRFAPDGVHYENEYMAQTVQNLDDI
PHFMAAKRYEALPSEEYKALNDSICKIWSAFLATDFRVNGDKSCVNEAVG
HSTYSNVDAGDGMLARVSETCAIQGRIVGPDDAYPHLTKVVSDERCDVVQ
LRTGVTYIIHGDSEGDARPALSQMYILSLRESLLRLGITEFCHPPYSHRV
WSIKGSRLVGTMNNALGRLCNEHCAAQCDNVGCLNGQKRAVKYMYVKSDN
PLKVYDFGTRYDPLGAKYAQQHDDLRKVLKKANPARVTRKRLLRTLMVFK
RLQQTLSANKCWVLPGNGDEGTFNPGEPFLKANATYLWDLYPHDADGDAV
SLWDGGKVRVTTYGQVAHVCTKNGSLLEPGTQNFAWAGHVQR*
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mRNA from alignment at tig00000850_pilon:182775..183953+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3588.t1 ID=Ggra3588.t1|Name=Ggra3588.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1179bp|location=Sequence derived from alignment at tig00000850_pilon:182775..183953+ (Gracilaria gracilis GNS1m male)
ATGAGTGCTTCGTCAAGTTCTGGTGAAAGCGACTTATCGTCGCACATGTC
TGTAGGCAAGCTGGCGCTCTTTTCAGTGAGATTCGCACCCGATGGGGTGC
ACTACGAAAATGAGTACATGGCTCAAACCGTGCAGAACCTCGACGATATT
CCACACTTCATGGCCGCCAAACGTTATGAGGCACTACCCTCAGAAGAATA
TAAAGCGCTCAACGACTCGATCTGCAAGATTTGGAGCGCGTTTCTTGCCA
CCGACTTTAGAGTGAACGGCGACAAGTCTTGCGTGAATGAGGCAGTTGGC
CACAGCACGTATTCGAATGTTGACGCCGGAGACGGCATGTTAGCAAGGGT
TTCAGAGACGTGCGCCATCCAAGGGCGAATTGTTGGTCCAGATGATGCGT
ATCCGCATCTGACCAAAGTTGTGTCAGATGAGAGGTGCGATGTGGTGCAA
TTGAGAACCGGAGTGACGTACATTATTCACGGAGACTCTGAAGGTGACGC
TCGGCCAGCTCTCTCTCAAATGTACATACTCAGTCTCCGTGAGAGTCTTT
TGCGGCTAGGCATCACTGAGTTTTGTCATCCGCCATATTCGCACAGAGTG
TGGAGCATAAAGGGAAGTAGACTTGTTGGAACCATGAACAACGCGCTGGG
ACGGCTTTGCAACGAGCACTGCGCTGCACAGTGTGACAACGTAGGGTGCC
TCAACGGACAAAAGCGGGCCGTCAAGTATATGTACGTGAAGAGCGATAAC
CCTCTAAAGGTATACGATTTTGGTACGAGATATGATCCGTTGGGGGCGAA
GTATGCTCAGCAGCACGACGATTTACGAAAAGTGCTAAAGAAGGCAAACC
CAGCTCGAGTAACTCGAAAGAGGCTTTTGCGGACTTTGATGGTCTTCAAG
AGACTTCAACAAACGCTTTCGGCCAACAAATGTTGGGTGCTTCCCGGCAA
CGGCGACGAGGGAACATTCAACCCCGGGGAGCCTTTCTTGAAGGCGAACG
CGACGTACTTGTGGGATCTGTATCCGCATGATGCGGACGGGGATGCGGTG
TCGCTGTGGGACGGTGGAAAAGTGCGTGTTACTACATATGGGCAAGTGGC
TCATGTTTGCACGAAAAACGGATCACTTCTTGAGCCGGGAACGCAGAACT
TTGCATGGGCGGGGCACGTGCAGCGGTGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:182775..183953+

>Ggra3588.t1 ID=Ggra3588.t1|Name=Ggra3588.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1179bp|location=Sequence derived from alignment at tig00000850_pilon:182775..183953+ (Gracilaria gracilis GNS1m male)
ATGAGTGCTTCGTCAAGTTCTGGTGAAAGCGACTTATCGTCGCACATGTC
TGTAGGCAAGCTGGCGCTCTTTTCAGTGAGATTCGCACCCGATGGGGTGC
ACTACGAAAATGAGTACATGGCTCAAACCGTGCAGAACCTCGACGATATT
CCACACTTCATGGCCGCCAAACGTTATGAGGCACTACCCTCAGAAGAATA
TAAAGCGCTCAACGACTCGATCTGCAAGATTTGGAGCGCGTTTCTTGCCA
CCGACTTTAGAGTGAACGGCGACAAGTCTTGCGTGAATGAGGCAGTTGGC
CACAGCACGTATTCGAATGTTGACGCCGGAGACGGCATGTTAGCAAGGGT
TTCAGAGACGTGCGCCATCCAAGGGCGAATTGTTGGTCCAGATGATGCGT
ATCCGCATCTGACCAAAGTTGTGTCAGATGAGAGGTGCGATGTGGTGCAA
TTGAGAACCGGAGTGACGTACATTATTCACGGAGACTCTGAAGGTGACGC
TCGGCCAGCTCTCTCTCAAATGTACATACTCAGTCTCCGTGAGAGTCTTT
TGCGGCTAGGCATCACTGAGTTTTGTCATCCGCCATATTCGCACAGAGTG
TGGAGCATAAAGGGAAGTAGACTTGTTGGAACCATGAACAACGCGCTGGG
ACGGCTTTGCAACGAGCACTGCGCTGCACAGTGTGACAACGTAGGGTGCC
TCAACGGACAAAAGCGGGCCGTCAAGTATATGTACGTGAAGAGCGATAAC
CCTCTAAAGGTATACGATTTTGGTACGAGATATGATCCGTTGGGGGCGAA
GTATGCTCAGCAGCACGACGATTTACGAAAAGTGCTAAAGAAGGCAAACC
CAGCTCGAGTAACTCGAAAGAGGCTTTTGCGGACTTTGATGGTCTTCAAG
AGACTTCAACAAACGCTTTCGGCCAACAAATGTTGGGTGCTTCCCGGCAA
CGGCGACGAGGGAACATTCAACCCCGGGGAGCCTTTCTTGAAGGCGAACG
CGACGTACTTGTGGGATCTGTATCCGCATGATGCGGACGGGGATGCGGTG
TCGCTGTGGGACGGTGGAAAAGTGCGTGTTACTACATATGGGCAAGTGGC
TCATGTTTGCACGAAAAACGGATCACTTCTTGAGCCGGGAACGCAGAACT
TTGCATGGGCGGGGCACGTGCAGCGGTGA
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