Ggra358.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra358.t1
Unique NameGgra358.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length172
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:142171..142686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra358Ggra358Gracilaria gracilis GNS1m malegenetig00000950_pilon 142171..142686 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra358.t1.stop1Ggra358.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000950_pilon 142171..142173 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra358.t1.CDS1Ggra358.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000950_pilon 142171..142686 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra358.t1.exon1Ggra358.t1.exon1Gracilaria gracilis GNS1m maleexontig00000950_pilon 142171..142686 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra358.t1.start1Ggra358.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000950_pilon 142684..142686 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra358.t1Ggra358.t1Gracilaria gracilis GNS1m malepolypeptidetig00000950_pilon 142171..142686 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra358.t1 ID=Ggra358.t1|Name=Ggra358.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=172bp
MSTEPNKANDALKHAVSHVSDFDQVFNYLEQDQIKNGFRFVPEAVALEFL
TECEQITSKANFKTKQAKSTPSKTVPPLSLALFLKDPADSTDVSPTFIGG
HPFSTETNPSSSNDNEPSKPPPAIQSVVETNETVSKATVERNPDVKPADG
KVDCTKHTSYAPIDESLDEAE*
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spliced messenger RNA

>Ggra358.t1 ID=Ggra358.t1|Name=Ggra358.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000950_pilon:142171..142686- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCACTGAACCTAACAAAGCTAACGACGCCCTGAAACACGCAGTCAG
CCATGTTTCTGACTTTGACCAAGTGTTCAACTACCTCGAACAAGACCAAA
TCAAGAACGGTTTTCGCTTTGTCCCAGAAGCCGTGGCACTTGAATTCCTG
ACGGAATGTGAACAGATCACATCAAAGGCCAACTTCAAAACGAAACAAGC
AAAGAGTACCCCAAGCAAAACGGTACCTCCTCTGTCATTGGCATTATTCC
TCAAAGATCCAGCAGACTCTACTGATGTTTCACCAACTTTCATCGGTGGT
CATCCCTTCTCTACCGAAACTAATCCTTCCTCTTCCAACGATAACGAGCC
TTCGAAACCTCCGCCCGCCATCCAAAGCGTGGTAGAGACGAACGAGACTG
TATCAAAAGCAACTGTTGAACGCAATCCCGACGTGAAACCTGCCGATGGC
AAGGTTGACTGTACAAAACATACTTCATATGCACCGATAGATGAAAGCCT
TGACGAAGCAGAATAG
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protein sequence of Ggra358.t1

>Ggra358.t1 ID=Ggra358.t1|Name=Ggra358.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=172bp
MSTEPNKANDALKHAVSHVSDFDQVFNYLEQDQIKNGFRFVPEAVALEFL
TECEQITSKANFKTKQAKSTPSKTVPPLSLALFLKDPADSTDVSPTFIGG
HPFSTETNPSSSNDNEPSKPPPAIQSVVETNETVSKATVERNPDVKPADG
KVDCTKHTSYAPIDESLDEAE*
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mRNA from alignment at tig00000950_pilon:142171..142686-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra358.t1 ID=Ggra358.t1|Name=Ggra358.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000950_pilon:142171..142686- (Gracilaria gracilis GNS1m male)
ATGTCCACTGAACCTAACAAAGCTAACGACGCCCTGAAACACGCAGTCAG
CCATGTTTCTGACTTTGACCAAGTGTTCAACTACCTCGAACAAGACCAAA
TCAAGAACGGTTTTCGCTTTGTCCCAGAAGCCGTGGCACTTGAATTCCTG
ACGGAATGTGAACAGATCACATCAAAGGCCAACTTCAAAACGAAACAAGC
AAAGAGTACCCCAAGCAAAACGGTACCTCCTCTGTCATTGGCATTATTCC
TCAAAGATCCAGCAGACTCTACTGATGTTTCACCAACTTTCATCGGTGGT
CATCCCTTCTCTACCGAAACTAATCCTTCCTCTTCCAACGATAACGAGCC
TTCGAAACCTCCGCCCGCCATCCAAAGCGTGGTAGAGACGAACGAGACTG
TATCAAAAGCAACTGTTGAACGCAATCCCGACGTGAAACCTGCCGATGGC
AAGGTTGACTGTACAAAACATACTTCATATGCACCGATAGATGAAAGCCT
TGACGAAGCAGAATAG
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Coding sequence (CDS) from alignment at tig00000950_pilon:142171..142686-

>Ggra358.t1 ID=Ggra358.t1|Name=Ggra358.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=516bp|location=Sequence derived from alignment at tig00000950_pilon:142171..142686- (Gracilaria gracilis GNS1m male)
ATGTCCACTGAACCTAACAAAGCTAACGACGCCCTGAAACACGCAGTCAG
CCATGTTTCTGACTTTGACCAAGTGTTCAACTACCTCGAACAAGACCAAA
TCAAGAACGGTTTTCGCTTTGTCCCAGAAGCCGTGGCACTTGAATTCCTG
ACGGAATGTGAACAGATCACATCAAAGGCCAACTTCAAAACGAAACAAGC
AAAGAGTACCCCAAGCAAAACGGTACCTCCTCTGTCATTGGCATTATTCC
TCAAAGATCCAGCAGACTCTACTGATGTTTCACCAACTTTCATCGGTGGT
CATCCCTTCTCTACCGAAACTAATCCTTCCTCTTCCAACGATAACGAGCC
TTCGAAACCTCCGCCCGCCATCCAAAGCGTGGTAGAGACGAACGAGACTG
TATCAAAAGCAACTGTTGAACGCAATCCCGACGTGAAACCTGCCGATGGC
AAGGTTGACTGTACAAAACATACTTCATATGCACCGATAGATGAAAGCCT
TGACGAAGCAGAATAG
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