Ggra3570.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3570.t1
Unique NameGgra3570.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length447
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000864_piloncontigtig00000864_pilon:7987..9327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3570Ggra3570Gracilaria gracilis GNS1m malegenetig00000864_pilon 7987..9327 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3570.t1.stop1Ggra3570.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000864_pilon 7987..7989 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3570.t1.CDS1Ggra3570.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000864_pilon 7987..9327 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3570.t1.exon1Ggra3570.t1.exon1Gracilaria gracilis GNS1m maleexontig00000864_pilon 7987..9327 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3570.t1.start1Ggra3570.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000864_pilon 9325..9327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3570.t1Ggra3570.t1Gracilaria gracilis GNS1m malepolypeptidetig00000864_pilon 7987..9327 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3570.t1 ID=Ggra3570.t1|Name=Ggra3570.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=447bp
MNLFGCRKGYVDFVGAVAATLPAPARRCKLHFNPFLETDRPKCFRKVAYE
SPGKFHRVKVEGSNNYPPDFRFRSNISITTSGDSTWDFNSLTSFSGDVHH
AMNGPGTASPLLQGHGMVNDTKEAMKSPCTPNHDDEISPVRARFRTSRVI
ATQPDNSRKIMSVDSNGAGPTLASARSAFWVETSQSGKTNDTERTQDEGE
EERGEPEGRLYRESEQPPKTAAATNASQSSGFIRKISPDFREGMEMIRRL
TRKASGSGASRNDATEDGVVAPSETAPGDMRADEEAERDRNLSKTGSLRK
LLSYRRGGSGDSPRGKPLRNLLRKTSKTLRANIFEFGRSGEIDGGRENNF
GDSSHRAANGDEQRGLKAYSTSLGQTAMRRGIEEFGVLEQRGSTSEPASL
SSRTNGNHLGQTERESIERHVNEAFGKDIMKHTVDVEKYLDNLAAP*
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spliced messenger RNA

>Ggra3570.t1 ID=Ggra3570.t1|Name=Ggra3570.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1341bp|location=Sequence derived from alignment at tig00000864_pilon:7987..9327- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCTCTTCGGATGCAGAAAAGGATATGTGGACTTTGTTGGTGCGGT
CGCCGCCACCCTCCCCGCTCCCGCAAGAAGGTGCAAGCTCCATTTCAACC
CATTCCTCGAAACCGACAGGCCTAAATGCTTCCGCAAGGTGGCATACGAG
AGCCCGGGGAAGTTTCACAGAGTCAAGGTGGAAGGCTCGAACAACTATCC
CCCAGATTTTCGGTTTCGCAGTAACATCTCCATCACGACTTCTGGAGACT
CTACTTGGGACTTCAACTCATTGACGTCGTTCTCCGGAGACGTTCATCAT
GCGATGAACGGCCCTGGTACAGCCTCTCCATTGCTGCAAGGCCATGGCAT
GGTAAATGACACGAAAGAAGCCATGAAATCGCCTTGCACTCCGAACCACG
ACGACGAGATAAGCCCCGTTCGAGCTCGTTTTAGGACATCGCGGGTGATT
GCTACTCAACCAGACAATTCGCGCAAGATCATGTCGGTTGATTCTAATGG
CGCAGGTCCGACACTAGCATCAGCGAGGTCTGCTTTCTGGGTCGAAACAT
CGCAAAGTGGCAAGACCAACGACACGGAGCGTACACAAGACGAGGGGGAA
GAAGAAAGAGGGGAACCAGAAGGGCGACTATACAGGGAGTCGGAGCAACC
GCCGAAAACAGCTGCGGCAACCAATGCTTCGCAATCGTCAGGTTTTATCC
GCAAGATTTCCCCTGATTTCCGGGAAGGGATGGAAATGATCAGGAGGCTG
ACCCGAAAAGCAAGCGGCAGTGGGGCTTCAAGAAACGACGCAACGGAGGA
CGGAGTAGTGGCGCCTTCGGAAACCGCACCTGGGGATATGCGGGCCGATG
AAGAAGCCGAAAGGGATCGGAACTTGTCGAAGACGGGTTCTTTAAGGAAG
TTGCTTTCCTACAGAAGGGGGGGCAGTGGTGACTCGCCTAGAGGGAAGCC
ACTTCGTAATTTGTTGCGGAAGACTTCGAAGACCTTGAGGGCGAACATTT
TCGAGTTCGGAAGGTCTGGTGAAATCGATGGTGGACGGGAGAATAATTTT
GGGGATTCCAGTCATCGAGCCGCAAATGGGGATGAGCAACGTGGCTTGAA
GGCGTATTCGACCTCGTTGGGGCAGACTGCTATGAGACGCGGCATCGAAG
AGTTCGGGGTATTAGAACAGAGGGGTTCCACTTCTGAGCCGGCGTCCCTT
TCCTCTCGCACTAATGGAAATCACTTGGGCCAGACAGAACGAGAGTCGAT
AGAAAGGCATGTGAATGAGGCGTTTGGGAAAGATATTATGAAACATACCG
TAGATGTGGAGAAATATCTTGACAATTTGGCGGCTCCTTAA
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protein sequence of Ggra3570.t1

>Ggra3570.t1 ID=Ggra3570.t1|Name=Ggra3570.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=447bp
MNLFGCRKGYVDFVGAVAATLPAPARRCKLHFNPFLETDRPKCFRKVAYE
SPGKFHRVKVEGSNNYPPDFRFRSNISITTSGDSTWDFNSLTSFSGDVHH
AMNGPGTASPLLQGHGMVNDTKEAMKSPCTPNHDDEISPVRARFRTSRVI
ATQPDNSRKIMSVDSNGAGPTLASARSAFWVETSQSGKTNDTERTQDEGE
EERGEPEGRLYRESEQPPKTAAATNASQSSGFIRKISPDFREGMEMIRRL
TRKASGSGASRNDATEDGVVAPSETAPGDMRADEEAERDRNLSKTGSLRK
LLSYRRGGSGDSPRGKPLRNLLRKTSKTLRANIFEFGRSGEIDGGRENNF
GDSSHRAANGDEQRGLKAYSTSLGQTAMRRGIEEFGVLEQRGSTSEPASL
SSRTNGNHLGQTERESIERHVNEAFGKDIMKHTVDVEKYLDNLAAP*
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mRNA from alignment at tig00000864_pilon:7987..9327-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3570.t1 ID=Ggra3570.t1|Name=Ggra3570.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1341bp|location=Sequence derived from alignment at tig00000864_pilon:7987..9327- (Gracilaria gracilis GNS1m male)
ATGAATCTCTTCGGATGCAGAAAAGGATATGTGGACTTTGTTGGTGCGGT
CGCCGCCACCCTCCCCGCTCCCGCAAGAAGGTGCAAGCTCCATTTCAACC
CATTCCTCGAAACCGACAGGCCTAAATGCTTCCGCAAGGTGGCATACGAG
AGCCCGGGGAAGTTTCACAGAGTCAAGGTGGAAGGCTCGAACAACTATCC
CCCAGATTTTCGGTTTCGCAGTAACATCTCCATCACGACTTCTGGAGACT
CTACTTGGGACTTCAACTCATTGACGTCGTTCTCCGGAGACGTTCATCAT
GCGATGAACGGCCCTGGTACAGCCTCTCCATTGCTGCAAGGCCATGGCAT
GGTAAATGACACGAAAGAAGCCATGAAATCGCCTTGCACTCCGAACCACG
ACGACGAGATAAGCCCCGTTCGAGCTCGTTTTAGGACATCGCGGGTGATT
GCTACTCAACCAGACAATTCGCGCAAGATCATGTCGGTTGATTCTAATGG
CGCAGGTCCGACACTAGCATCAGCGAGGTCTGCTTTCTGGGTCGAAACAT
CGCAAAGTGGCAAGACCAACGACACGGAGCGTACACAAGACGAGGGGGAA
GAAGAAAGAGGGGAACCAGAAGGGCGACTATACAGGGAGTCGGAGCAACC
GCCGAAAACAGCTGCGGCAACCAATGCTTCGCAATCGTCAGGTTTTATCC
GCAAGATTTCCCCTGATTTCCGGGAAGGGATGGAAATGATCAGGAGGCTG
ACCCGAAAAGCAAGCGGCAGTGGGGCTTCAAGAAACGACGCAACGGAGGA
CGGAGTAGTGGCGCCTTCGGAAACCGCACCTGGGGATATGCGGGCCGATG
AAGAAGCCGAAAGGGATCGGAACTTGTCGAAGACGGGTTCTTTAAGGAAG
TTGCTTTCCTACAGAAGGGGGGGCAGTGGTGACTCGCCTAGAGGGAAGCC
ACTTCGTAATTTGTTGCGGAAGACTTCGAAGACCTTGAGGGCGAACATTT
TCGAGTTCGGAAGGTCTGGTGAAATCGATGGTGGACGGGAGAATAATTTT
GGGGATTCCAGTCATCGAGCCGCAAATGGGGATGAGCAACGTGGCTTGAA
GGCGTATTCGACCTCGTTGGGGCAGACTGCTATGAGACGCGGCATCGAAG
AGTTCGGGGTATTAGAACAGAGGGGTTCCACTTCTGAGCCGGCGTCCCTT
TCCTCTCGCACTAATGGAAATCACTTGGGCCAGACAGAACGAGAGTCGAT
AGAAAGGCATGTGAATGAGGCGTTTGGGAAAGATATTATGAAACATACCG
TAGATGTGGAGAAATATCTTGACAATTTGGCGGCTCCTTAA
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Coding sequence (CDS) from alignment at tig00000864_pilon:7987..9327-

>Ggra3570.t1 ID=Ggra3570.t1|Name=Ggra3570.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1341bp|location=Sequence derived from alignment at tig00000864_pilon:7987..9327- (Gracilaria gracilis GNS1m male)
ATGAATCTCTTCGGATGCAGAAAAGGATATGTGGACTTTGTTGGTGCGGT
CGCCGCCACCCTCCCCGCTCCCGCAAGAAGGTGCAAGCTCCATTTCAACC
CATTCCTCGAAACCGACAGGCCTAAATGCTTCCGCAAGGTGGCATACGAG
AGCCCGGGGAAGTTTCACAGAGTCAAGGTGGAAGGCTCGAACAACTATCC
CCCAGATTTTCGGTTTCGCAGTAACATCTCCATCACGACTTCTGGAGACT
CTACTTGGGACTTCAACTCATTGACGTCGTTCTCCGGAGACGTTCATCAT
GCGATGAACGGCCCTGGTACAGCCTCTCCATTGCTGCAAGGCCATGGCAT
GGTAAATGACACGAAAGAAGCCATGAAATCGCCTTGCACTCCGAACCACG
ACGACGAGATAAGCCCCGTTCGAGCTCGTTTTAGGACATCGCGGGTGATT
GCTACTCAACCAGACAATTCGCGCAAGATCATGTCGGTTGATTCTAATGG
CGCAGGTCCGACACTAGCATCAGCGAGGTCTGCTTTCTGGGTCGAAACAT
CGCAAAGTGGCAAGACCAACGACACGGAGCGTACACAAGACGAGGGGGAA
GAAGAAAGAGGGGAACCAGAAGGGCGACTATACAGGGAGTCGGAGCAACC
GCCGAAAACAGCTGCGGCAACCAATGCTTCGCAATCGTCAGGTTTTATCC
GCAAGATTTCCCCTGATTTCCGGGAAGGGATGGAAATGATCAGGAGGCTG
ACCCGAAAAGCAAGCGGCAGTGGGGCTTCAAGAAACGACGCAACGGAGGA
CGGAGTAGTGGCGCCTTCGGAAACCGCACCTGGGGATATGCGGGCCGATG
AAGAAGCCGAAAGGGATCGGAACTTGTCGAAGACGGGTTCTTTAAGGAAG
TTGCTTTCCTACAGAAGGGGGGGCAGTGGTGACTCGCCTAGAGGGAAGCC
ACTTCGTAATTTGTTGCGGAAGACTTCGAAGACCTTGAGGGCGAACATTT
TCGAGTTCGGAAGGTCTGGTGAAATCGATGGTGGACGGGAGAATAATTTT
GGGGATTCCAGTCATCGAGCCGCAAATGGGGATGAGCAACGTGGCTTGAA
GGCGTATTCGACCTCGTTGGGGCAGACTGCTATGAGACGCGGCATCGAAG
AGTTCGGGGTATTAGAACAGAGGGGTTCCACTTCTGAGCCGGCGTCCCTT
TCCTCTCGCACTAATGGAAATCACTTGGGCCAGACAGAACGAGAGTCGAT
AGAAAGGCATGTGAATGAGGCGTTTGGGAAAGATATTATGAAACATACCG
TAGATGTGGAGAAATATCTTGACAATTTGGCGGCTCCTTAA
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