Ggra3558.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3558.t1
Unique NameGgra3558.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length373
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000655_piloncontigtig00000655_pilon:1740..2858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3558Ggra3558Gracilaria gracilis GNS1m malegenetig00000655_pilon 1740..2858 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3558.t1.stop1Ggra3558.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000655_pilon 1740..1742 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3558.t1.CDS1Ggra3558.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000655_pilon 1740..2858 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3558.t1.exon1Ggra3558.t1.exon1Gracilaria gracilis GNS1m maleexontig00000655_pilon 1740..2858 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3558.t1.start1Ggra3558.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000655_pilon 2856..2858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3558.t1Ggra3558.t1Gracilaria gracilis GNS1m malepolypeptidetig00000655_pilon 1740..2858 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3558.t1 ID=Ggra3558.t1|Name=Ggra3558.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=373bp
MGEEALYSAVLHELALSQAKLSPAQPSTWPKIVRLLKLCPKLPSLPHSPA
LQHLLTSGSAVRKDGIHLSRRQHGARRKSAMAAGSPKHSPSSGQGRLPAT
GGQGPLPLGSRRERTHSFSSSGQQLVKGVPSTGARTPVPKPSQRTTLSVQ
GLLPSSKSLSQFPRIPSSTAKDVQPGSAVDLHWEAFKRVDDSLRSEGEVY
AHGLQLGSSYVSHFRSNPSHPSSSASAHFVRGLYPLDARSEEAVLALGTF
LISSRGNFRHVIVPALLRHFLSLPHFKWRKHERIHIRDRAVTTRADRISA
GGTHSVLVQQQALGEHLFGARTGNSDFYDAGQDLDAHMTTPNLFPAERFS
CAMTSMLAEVAVVLPVTRSKRL*
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spliced messenger RNA

>Ggra3558.t1 ID=Ggra3558.t1|Name=Ggra3558.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000655_pilon:1740..2858- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGAGGAAGCGCTGTACTCAGCTGTCTTGCACGAGCTCGCACTGTC
TCAAGCGAAGCTTTCTCCTGCTCAGCCATCTACGTGGCCCAAAATAGTTC
GTTTACTGAAGCTCTGTCCGAAGCTTCCGTCACTTCCACACTCTCCCGCC
CTGCAGCACTTGCTTACTTCAGGATCGGCCGTGCGAAAGGATGGTATTCA
CTTGAGCAGAAGACAACACGGTGCGCGCAGAAAGAGTGCCATGGCAGCAG
GCTCACCGAAGCACTCTCCTTCCAGTGGGCAAGGTCGACTTCCGGCCACG
GGTGGCCAAGGTCCCCTTCCGCTTGGTTCCCGAAGGGAGAGAACACATTC
GTTTTCTTCATCTGGGCAACAACTAGTGAAAGGCGTCCCGTCGACCGGTG
CTCGCACCCCAGTCCCCAAACCATCCCAACGCACAACTTTAAGTGTGCAG
GGCTTGCTTCCTTCTTCCAAGTCTTTGAGTCAGTTCCCTAGGATACCTTC
GTCAACCGCCAAGGACGTACAGCCTGGATCTGCTGTGGATCTGCATTGGG
AGGCGTTCAAGAGAGTAGATGACTCCCTGCGATCGGAAGGTGAAGTGTAT
GCTCATGGCTTGCAGCTGGGCTCATCCTACGTGTCTCATTTTCGCTCCAA
TCCGTCGCATCCATCATCATCAGCTTCAGCTCATTTCGTCAGAGGTCTAT
ATCCGCTGGACGCACGCAGCGAGGAAGCTGTGCTAGCGCTGGGCACATTC
CTAATTTCTTCCCGGGGCAACTTTCGCCATGTAATTGTTCCCGCACTGCT
CCGGCACTTTCTGTCGCTGCCGCATTTCAAGTGGCGAAAGCATGAGAGAA
TTCACATCCGCGACCGTGCTGTGACTACTCGGGCGGATAGAATTAGTGCA
GGTGGCACACACTCCGTTCTTGTGCAGCAGCAGGCGCTGGGAGAGCATTT
GTTCGGTGCGCGCACCGGCAATTCTGATTTCTACGATGCAGGACAAGACT
TGGATGCTCACATGACTACTCCCAACCTATTCCCTGCCGAGAGATTCTCT
TGCGCCATGACTTCCATGCTTGCTGAAGTTGCAGTGGTCCTCCCGGTCAC
AAGGAGTAAGCGCCTCTAG
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protein sequence of Ggra3558.t1

>Ggra3558.t1 ID=Ggra3558.t1|Name=Ggra3558.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=373bp
MGEEALYSAVLHELALSQAKLSPAQPSTWPKIVRLLKLCPKLPSLPHSPA
LQHLLTSGSAVRKDGIHLSRRQHGARRKSAMAAGSPKHSPSSGQGRLPAT
GGQGPLPLGSRRERTHSFSSSGQQLVKGVPSTGARTPVPKPSQRTTLSVQ
GLLPSSKSLSQFPRIPSSTAKDVQPGSAVDLHWEAFKRVDDSLRSEGEVY
AHGLQLGSSYVSHFRSNPSHPSSSASAHFVRGLYPLDARSEEAVLALGTF
LISSRGNFRHVIVPALLRHFLSLPHFKWRKHERIHIRDRAVTTRADRISA
GGTHSVLVQQQALGEHLFGARTGNSDFYDAGQDLDAHMTTPNLFPAERFS
CAMTSMLAEVAVVLPVTRSKRL*
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mRNA from alignment at tig00000655_pilon:1740..2858-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3558.t1 ID=Ggra3558.t1|Name=Ggra3558.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000655_pilon:1740..2858- (Gracilaria gracilis GNS1m male)
ATGGGCGAGGAAGCGCTGTACTCAGCTGTCTTGCACGAGCTCGCACTGTC
TCAAGCGAAGCTTTCTCCTGCTCAGCCATCTACGTGGCCCAAAATAGTTC
GTTTACTGAAGCTCTGTCCGAAGCTTCCGTCACTTCCACACTCTCCCGCC
CTGCAGCACTTGCTTACTTCAGGATCGGCCGTGCGAAAGGATGGTATTCA
CTTGAGCAGAAGACAACACGGTGCGCGCAGAAAGAGTGCCATGGCAGCAG
GCTCACCGAAGCACTCTCCTTCCAGTGGGCAAGGTCGACTTCCGGCCACG
GGTGGCCAAGGTCCCCTTCCGCTTGGTTCCCGAAGGGAGAGAACACATTC
GTTTTCTTCATCTGGGCAACAACTAGTGAAAGGCGTCCCGTCGACCGGTG
CTCGCACCCCAGTCCCCAAACCATCCCAACGCACAACTTTAAGTGTGCAG
GGCTTGCTTCCTTCTTCCAAGTCTTTGAGTCAGTTCCCTAGGATACCTTC
GTCAACCGCCAAGGACGTACAGCCTGGATCTGCTGTGGATCTGCATTGGG
AGGCGTTCAAGAGAGTAGATGACTCCCTGCGATCGGAAGGTGAAGTGTAT
GCTCATGGCTTGCAGCTGGGCTCATCCTACGTGTCTCATTTTCGCTCCAA
TCCGTCGCATCCATCATCATCAGCTTCAGCTCATTTCGTCAGAGGTCTAT
ATCCGCTGGACGCACGCAGCGAGGAAGCTGTGCTAGCGCTGGGCACATTC
CTAATTTCTTCCCGGGGCAACTTTCGCCATGTAATTGTTCCCGCACTGCT
CCGGCACTTTCTGTCGCTGCCGCATTTCAAGTGGCGAAAGCATGAGAGAA
TTCACATCCGCGACCGTGCTGTGACTACTCGGGCGGATAGAATTAGTGCA
GGTGGCACACACTCCGTTCTTGTGCAGCAGCAGGCGCTGGGAGAGCATTT
GTTCGGTGCGCGCACCGGCAATTCTGATTTCTACGATGCAGGACAAGACT
TGGATGCTCACATGACTACTCCCAACCTATTCCCTGCCGAGAGATTCTCT
TGCGCCATGACTTCCATGCTTGCTGAAGTTGCAGTGGTCCTCCCGGTCAC
AAGGAGTAAGCGCCTCTAG
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Coding sequence (CDS) from alignment at tig00000655_pilon:1740..2858-

>Ggra3558.t1 ID=Ggra3558.t1|Name=Ggra3558.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1119bp|location=Sequence derived from alignment at tig00000655_pilon:1740..2858- (Gracilaria gracilis GNS1m male)
ATGGGCGAGGAAGCGCTGTACTCAGCTGTCTTGCACGAGCTCGCACTGTC
TCAAGCGAAGCTTTCTCCTGCTCAGCCATCTACGTGGCCCAAAATAGTTC
GTTTACTGAAGCTCTGTCCGAAGCTTCCGTCACTTCCACACTCTCCCGCC
CTGCAGCACTTGCTTACTTCAGGATCGGCCGTGCGAAAGGATGGTATTCA
CTTGAGCAGAAGACAACACGGTGCGCGCAGAAAGAGTGCCATGGCAGCAG
GCTCACCGAAGCACTCTCCTTCCAGTGGGCAAGGTCGACTTCCGGCCACG
GGTGGCCAAGGTCCCCTTCCGCTTGGTTCCCGAAGGGAGAGAACACATTC
GTTTTCTTCATCTGGGCAACAACTAGTGAAAGGCGTCCCGTCGACCGGTG
CTCGCACCCCAGTCCCCAAACCATCCCAACGCACAACTTTAAGTGTGCAG
GGCTTGCTTCCTTCTTCCAAGTCTTTGAGTCAGTTCCCTAGGATACCTTC
GTCAACCGCCAAGGACGTACAGCCTGGATCTGCTGTGGATCTGCATTGGG
AGGCGTTCAAGAGAGTAGATGACTCCCTGCGATCGGAAGGTGAAGTGTAT
GCTCATGGCTTGCAGCTGGGCTCATCCTACGTGTCTCATTTTCGCTCCAA
TCCGTCGCATCCATCATCATCAGCTTCAGCTCATTTCGTCAGAGGTCTAT
ATCCGCTGGACGCACGCAGCGAGGAAGCTGTGCTAGCGCTGGGCACATTC
CTAATTTCTTCCCGGGGCAACTTTCGCCATGTAATTGTTCCCGCACTGCT
CCGGCACTTTCTGTCGCTGCCGCATTTCAAGTGGCGAAAGCATGAGAGAA
TTCACATCCGCGACCGTGCTGTGACTACTCGGGCGGATAGAATTAGTGCA
GGTGGCACACACTCCGTTCTTGTGCAGCAGCAGGCGCTGGGAGAGCATTT
GTTCGGTGCGCGCACCGGCAATTCTGATTTCTACGATGCAGGACAAGACT
TGGATGCTCACATGACTACTCCCAACCTATTCCCTGCCGAGAGATTCTCT
TGCGCCATGACTTCCATGCTTGCTGAAGTTGCAGTGGTCCTCCCGGTCAC
AAGGAGTAAGCGCCTCTAG
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