Ggra3515.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3515.t1
Unique NameGgra3515.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:625123..625704 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3515Ggra3515Gracilaria gracilis GNS1m malegenetig00000059_pilon 625123..625704 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3515.t1.stop1Ggra3515.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000059_pilon 625123..625125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3515.t1.CDS1Ggra3515.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000059_pilon 625123..625704 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3515.t1.exon1Ggra3515.t1.exon1Gracilaria gracilis GNS1m maleexontig00000059_pilon 625123..625704 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3515.t1.start1Ggra3515.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000059_pilon 625702..625704 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3515.t1Ggra3515.t1Gracilaria gracilis GNS1m malepolypeptidetig00000059_pilon 625123..625704 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3515.t1 ID=Ggra3515.t1|Name=Ggra3515.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=194bp
MRTGRQLYNSPQLISISINSEMSTTPPPANDSSQALAHRFNALTPRTQQN
INEMLYRVEKPVKIADLEEDLAKLQSRCDKKISDLIQEVVSLKTNLAKTQ
EKVLALETDLVHVMKESIKQNNELKSNHRTALHRINVISRICESSNGSSR
NGRKRSRPESFFTESLSSTLDGQTVELTCLYCQRSGKSCRIYP*
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spliced messenger RNA

>Ggra3515.t1 ID=Ggra3515.t1|Name=Ggra3515.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000059_pilon:625123..625704- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAACTGGTCGACAACTCTACAACTCTCCGCAACTCATTTCTATATC
GATCAATTCCGAGATGTCCACGACGCCTCCCCCTGCAAACGACTCTTCAC
AAGCGTTGGCGCATCGCTTCAACGCTTTAACGCCTCGCACACAGCAGAAC
ATTAATGAGATGCTGTACAGAGTCGAGAAACCGGTGAAGATTGCAGATCT
GGAAGAGGATTTGGCCAAGTTGCAATCAAGATGTGATAAGAAGATATCAG
ATCTGATCCAAGAAGTTGTCTCGCTGAAGACTAATCTTGCCAAGACGCAG
GAAAAAGTTTTGGCCCTGGAAACCGATTTGGTACATGTCATGAAAGAGTC
AATTAAACAGAACAATGAACTCAAGAGCAATCATAGAACGGCTTTGCACC
GCATCAACGTTATAAGCCGCATCTGTGAATCTTCGAATGGATCTTCTCGC
AATGGTCGTAAACGTTCACGTCCCGAGTCGTTCTTTACGGAGTCGCTTTC
TTCGACTCTCGATGGCCAAACTGTCGAGCTGACGTGTCTCTACTGCCAGA
GGAGCGGGAAATCGTGCCGCATCTATCCTTAG
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protein sequence of Ggra3515.t1

>Ggra3515.t1 ID=Ggra3515.t1|Name=Ggra3515.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MRTGRQLYNSPQLISISINSEMSTTPPPANDSSQALAHRFNALTPRTQQN
INEMLYRVEKPVKIADLEEDLAKLQSRCDKKISDLIQEVVSLKTNLAKTQ
EKVLALETDLVHVMKESIKQNNELKSNHRTALHRINVISRICESSNGSSR
NGRKRSRPESFFTESLSSTLDGQTVELTCLYCQRSGKSCRIYP*
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mRNA from alignment at tig00000059_pilon:625123..625704-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3515.t1 ID=Ggra3515.t1|Name=Ggra3515.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000059_pilon:625123..625704- (Gracilaria gracilis GNS1m male)
ATGCGAACTGGTCGACAACTCTACAACTCTCCGCAACTCATTTCTATATC
GATCAATTCCGAGATGTCCACGACGCCTCCCCCTGCAAACGACTCTTCAC
AAGCGTTGGCGCATCGCTTCAACGCTTTAACGCCTCGCACACAGCAGAAC
ATTAATGAGATGCTGTACAGAGTCGAGAAACCGGTGAAGATTGCAGATCT
GGAAGAGGATTTGGCCAAGTTGCAATCAAGATGTGATAAGAAGATATCAG
ATCTGATCCAAGAAGTTGTCTCGCTGAAGACTAATCTTGCCAAGACGCAG
GAAAAAGTTTTGGCCCTGGAAACCGATTTGGTACATGTCATGAAAGAGTC
AATTAAACAGAACAATGAACTCAAGAGCAATCATAGAACGGCTTTGCACC
GCATCAACGTTATAAGCCGCATCTGTGAATCTTCGAATGGATCTTCTCGC
AATGGTCGTAAACGTTCACGTCCCGAGTCGTTCTTTACGGAGTCGCTTTC
TTCGACTCTCGATGGCCAAACTGTCGAGCTGACGTGTCTCTACTGCCAGA
GGAGCGGGAAATCGTGCCGCATCTATCCTTAG
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Coding sequence (CDS) from alignment at tig00000059_pilon:625123..625704-

>Ggra3515.t1 ID=Ggra3515.t1|Name=Ggra3515.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=582bp|location=Sequence derived from alignment at tig00000059_pilon:625123..625704- (Gracilaria gracilis GNS1m male)
ATGCGAACTGGTCGACAACTCTACAACTCTCCGCAACTCATTTCTATATC
GATCAATTCCGAGATGTCCACGACGCCTCCCCCTGCAAACGACTCTTCAC
AAGCGTTGGCGCATCGCTTCAACGCTTTAACGCCTCGCACACAGCAGAAC
ATTAATGAGATGCTGTACAGAGTCGAGAAACCGGTGAAGATTGCAGATCT
GGAAGAGGATTTGGCCAAGTTGCAATCAAGATGTGATAAGAAGATATCAG
ATCTGATCCAAGAAGTTGTCTCGCTGAAGACTAATCTTGCCAAGACGCAG
GAAAAAGTTTTGGCCCTGGAAACCGATTTGGTACATGTCATGAAAGAGTC
AATTAAACAGAACAATGAACTCAAGAGCAATCATAGAACGGCTTTGCACC
GCATCAACGTTATAAGCCGCATCTGTGAATCTTCGAATGGATCTTCTCGC
AATGGTCGTAAACGTTCACGTCCCGAGTCGTTCTTTACGGAGTCGCTTTC
TTCGACTCTCGATGGCCAAACTGTCGAGCTGACGTGTCTCTACTGCCAGA
GGAGCGGGAAATCGTGCCGCATCTATCCTTAG
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