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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005705480.1 |
| PFAMs | CBS,Voltage_CLC |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 7.08e-93 |
| EggNOG OGs | COG0038@1|root,KOG0474@2759|Eukaryota |
| Description | Chloride Channel |
| COG category | P |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3493.t1.stop1 | Ggra3493.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000059_pilon 530941..530943 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3493.t1.start1 | Ggra3493.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000059_pilon 533590..533592 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra3493.t1 ID=Ggra3493.t1|Name=Ggra3493.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=884bp MSQSQDLDNYTLSYAAFFAPRTHKFDTIDFRLSPSPANIASYFPTSSKQR IRHLRLAGLLGMAVGFVFALVGFVVDQLTRGLTIGLYTATDRLFRVTNFW VAVLLFITLSTVFVLIASLMVVYVAPLGAGSGIPELKSYLNGVRVPGFLA INSFFVKAIGIAFSLAGGLVCGKQGPMIHAAAILAAGMSQAASSRFSWRW RSSLFRVFRTEAWKRDFTAVGAAIGVAVAFGSPMGAWMWVYEDAATHWNW DLGIITLGGCLVGSTVVRILNFLANGIPANGFDDFLLNDIGKLAPLQGST FFLKDAPVYLLIGLVGGLVGAILPLINKYITLFRYEYVKQPRRRLFESAL IAITTAFFRIVIPYIANDCQPINPGLQEVLNNAKDFSRFCCEEGEFSPWA TAIYNPSDAVVRSLLFANDAGSFSAAAVAVATVFYLVFIIWTYGVAVPAG VFFPGFLLGSVYGRLIGIAVQAIFPSRTDVSLGGFAFVGAVSALAGFTRT ISVSVIALEAVGGYTGAFAAVFVAVIAKLTGDFLYRQGIYDLHIDLKGIP FLSNEIPRLESYVRLRVSDVMQSKVIGIRRLSRISGLVRMLATNEHHSFP VFLKLTARTSTSPLDVPDVGRASARMSRMANESTDSLMASQLDQLEADEI GKLVPPSTIITPDHIGLQATIFDEGTTRLVTLTDKKEVLNYRRFESRHGA PESFVNEAPTKRLKDDDASRDTSSASFQGFPRKSPSNESEVPEFELVGSI DRGTLVALLKHECDKHEREVDRDQLSREDLDSAWPNSSLLKKNHESVVIN RIRELQLLNTVIDLKPHINPDPLLMSDRAMPSTAYVLFRRTGARHILVAN MRGGRVCGIMTRKDVLPESITDVLSRMQGVKVA* back to topspliced messenger RNA >Ggra3493.t1 ID=Ggra3493.t1|Name=Ggra3493.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2652bp|location=Sequence derived from alignment at tig00000059_pilon:530941..533592- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGCAATCACAGGACCTTGACAACTATACTCTGTCTTATGCTGCATT CTTTGCGCCGCGCACGCACAAGTTTGATACCATAGACTTCCGCTTGTCGC CGTCCCCGGCCAACATCGCCTCGTACTTTCCGACCTCGTCCAAGCAGCGC ATTCGCCACCTCCGCCTCGCAGGCCTGCTGGGAATGGCCGTTGGCTTTGT ATTCGCTCTGGTTGGCTTCGTTGTCGATCAGCTCACCAGGGGGCTCACAA TTGGTCTGTACACAGCCACAGACCGTTTGTTTCGCGTCACCAACTTCTGG GTAGCAGTTCTGCTGTTTATCACCCTCTCCACCGTGTTCGTTCTTATTGC CTCACTCATGGTGGTTTATGTGGCACCTCTCGGAGCTGGCTCTGGAATTC CGGAGTTGAAGAGCTATCTCAATGGTGTCAGAGTGCCGGGCTTTCTCGCT ATAAACTCCTTCTTCGTCAAGGCAATCGGTATAGCATTTAGTCTCGCTGG AGGGCTTGTGTGTGGTAAACAGGGGCCTATGATCCATGCGGCTGCCATTT TGGCTGCAGGCATGAGTCAGGCTGCCAGTTCACGTTTTTCGTGGCGTTGG AGGAGTTCTCTCTTCCGAGTGTTCAGAACAGAAGCATGGAAGCGTGATTT CACAGCTGTTGGTGCTGCTATTGGAGTCGCAGTCGCCTTTGGCTCCCCTA TGGGAGCTTGGATGTGGGTGTACGAAGATGCCGCCACGCACTGGAACTGG GACCTTGGTATCATCACTTTGGGTGGCTGCCTCGTTGGTAGTACCGTTGT GCGCATTCTCAACTTTCTTGCGAACGGCATCCCGGCGAATGGTTTTGACG ATTTCCTTCTGAACGACATTGGTAAGCTTGCTCCCTTGCAAGGTTCGACC TTCTTCCTTAAGGATGCACCTGTGTATCTCCTCATCGGGCTCGTTGGTGG TTTGGTGGGAGCGATTCTTCCTCTCATCAACAAGTACATCACGTTATTCC GTTACGAATACGTGAAGCAGCCTAGACGACGTCTGTTCGAAAGCGCGCTC ATTGCTATAACGACAGCCTTCTTTCGGATTGTTATTCCATATATTGCGAA TGACTGCCAGCCTATCAATCCCGGACTTCAGGAAGTTCTCAATAATGCAA AGGACTTCTCCCGGTTTTGTTGTGAGGAAGGCGAGTTTTCACCTTGGGCC ACCGCGATATACAATCCCTCAGATGCGGTAGTGCGTTCTCTTCTCTTCGC CAACGATGCGGGAAGTTTCTCCGCTGCCGCAGTGGCAGTTGCTACCGTGT TCTACCTGGTCTTCATCATATGGACGTACGGTGTTGCGGTTCCGGCCGGT GTCTTTTTTCCTGGGTTTTTGTTGGGGAGCGTATACGGCCGTCTCATTGG CATCGCAGTGCAGGCAATTTTTCCCTCTCGTACCGACGTTTCGTTGGGAG GCTTCGCGTTTGTTGGAGCGGTATCCGCGCTTGCTGGATTCACTAGAACC ATATCTGTGTCAGTTATCGCTCTGGAAGCTGTCGGTGGCTACACTGGTGC CTTTGCAGCTGTTTTCGTTGCTGTTATTGCGAAGCTAACCGGAGATTTTC TCTATAGGCAAGGAATATATGATCTTCACATCGATTTGAAGGGAATTCCT TTCTTGTCGAACGAAATACCCCGGCTTGAGTCATATGTTCGGCTTCGTGT ATCCGATGTAATGCAGAGCAAGGTTATTGGGATTCGCCGTCTCTCTAGGA TTTCTGGCCTGGTTCGGATGCTTGCAACAAATGAGCATCATTCGTTCCCT GTTTTCTTGAAGCTTACTGCAAGAACTAGCACTTCGCCGCTTGATGTTCC TGACGTGGGACGCGCCAGTGCAAGAATGTCACGCATGGCAAATGAGTCCA CTGATTCATTGATGGCTTCTCAGTTAGATCAACTTGAAGCTGATGAGATT GGCAAGCTGGTTCCGCCATCAACCATTATTACTCCAGATCATATCGGCCT ACAGGCAACAATTTTCGACGAAGGCACAACTCGACTCGTTACCCTCACAG ACAAGAAGGAGGTGCTCAACTACAGGAGGTTTGAGAGCAGACATGGCGCA CCGGAAAGCTTTGTGAACGAAGCACCCACCAAACGCTTGAAGGACGATGA TGCTTCTCGGGATACATCGTCGGCGTCATTCCAAGGGTTTCCTCGAAAGA GTCCTTCAAACGAAAGTGAGGTGCCTGAGTTTGAGCTCGTGGGTAGCATT GATAGAGGAACACTGGTTGCCCTTCTGAAGCATGAGTGTGACAAGCATGA GCGTGAAGTAGATCGGGACCAGCTCTCAAGGGAAGATCTTGACTCCGCGT GGCCGAATTCTTCATTACTGAAGAAGAACCATGAAAGCGTGGTGATTAAT CGCATACGGGAGTTGCAGTTGTTGAACACTGTCATCGACCTCAAGCCACA TATTAATCCAGACCCGCTGCTCATGTCTGATCGAGCAATGCCGTCCACGG CATATGTCTTGTTTCGGCGAACTGGGGCTCGTCATATCCTTGTGGCAAAC ATGCGAGGTGGAAGGGTATGTGGTATCATGACTCGCAAAGATGTGTTACC GGAAAGTATTACCGATGTCCTCAGTCGTATGCAGGGGGTCAAAGTGGCTT AG back to topprotein sequence of Ggra3493.t1 >Ggra3493.t1 ID=Ggra3493.t1|Name=Ggra3493.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=884bp
MSQSQDLDNYTLSYAAFFAPRTHKFDTIDFRLSPSPANIASYFPTSSKQR IRHLRLAGLLGMAVGFVFALVGFVVDQLTRGLTIGLYTATDRLFRVTNFW VAVLLFITLSTVFVLIASLMVVYVAPLGAGSGIPELKSYLNGVRVPGFLA INSFFVKAIGIAFSLAGGLVCGKQGPMIHAAAILAAGMSQAASSRFSWRW RSSLFRVFRTEAWKRDFTAVGAAIGVAVAFGSPMGAWMWVYEDAATHWNW DLGIITLGGCLVGSTVVRILNFLANGIPANGFDDFLLNDIGKLAPLQGST FFLKDAPVYLLIGLVGGLVGAILPLINKYITLFRYEYVKQPRRRLFESAL IAITTAFFRIVIPYIANDCQPINPGLQEVLNNAKDFSRFCCEEGEFSPWA TAIYNPSDAVVRSLLFANDAGSFSAAAVAVATVFYLVFIIWTYGVAVPAG VFFPGFLLGSVYGRLIGIAVQAIFPSRTDVSLGGFAFVGAVSALAGFTRT ISVSVIALEAVGGYTGAFAAVFVAVIAKLTGDFLYRQGIYDLHIDLKGIP FLSNEIPRLESYVRLRVSDVMQSKVIGIRRLSRISGLVRMLATNEHHSFP VFLKLTARTSTSPLDVPDVGRASARMSRMANESTDSLMASQLDQLEADEI GKLVPPSTIITPDHIGLQATIFDEGTTRLVTLTDKKEVLNYRRFESRHGA PESFVNEAPTKRLKDDDASRDTSSASFQGFPRKSPSNESEVPEFELVGSI DRGTLVALLKHECDKHEREVDRDQLSREDLDSAWPNSSLLKKNHESVVIN RIRELQLLNTVIDLKPHINPDPLLMSDRAMPSTAYVLFRRTGARHILVAN MRGGRVCGIMTRKDVLPESITDVLSRMQGVKVA* back to topmRNA from alignment at tig00000059_pilon:530941..533592- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra3493.t1 ID=Ggra3493.t1|Name=Ggra3493.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2652bp|location=Sequence derived from alignment at tig00000059_pilon:530941..533592- (Gracilaria gracilis GNS1m male) ATGTCGCAATCACAGGACCTTGACAACTATACTCTGTCTTATGCTGCATT
CTTTGCGCCGCGCACGCACAAGTTTGATACCATAGACTTCCGCTTGTCGC
CGTCCCCGGCCAACATCGCCTCGTACTTTCCGACCTCGTCCAAGCAGCGC
ATTCGCCACCTCCGCCTCGCAGGCCTGCTGGGAATGGCCGTTGGCTTTGT
ATTCGCTCTGGTTGGCTTCGTTGTCGATCAGCTCACCAGGGGGCTCACAA
TTGGTCTGTACACAGCCACAGACCGTTTGTTTCGCGTCACCAACTTCTGG
GTAGCAGTTCTGCTGTTTATCACCCTCTCCACCGTGTTCGTTCTTATTGC
CTCACTCATGGTGGTTTATGTGGCACCTCTCGGAGCTGGCTCTGGAATTC
CGGAGTTGAAGAGCTATCTCAATGGTGTCAGAGTGCCGGGCTTTCTCGCT
ATAAACTCCTTCTTCGTCAAGGCAATCGGTATAGCATTTAGTCTCGCTGG
AGGGCTTGTGTGTGGTAAACAGGGGCCTATGATCCATGCGGCTGCCATTT
TGGCTGCAGGCATGAGTCAGGCTGCCAGTTCACGTTTTTCGTGGCGTTGG
AGGAGTTCTCTCTTCCGAGTGTTCAGAACAGAAGCATGGAAGCGTGATTT
CACAGCTGTTGGTGCTGCTATTGGAGTCGCAGTCGCCTTTGGCTCCCCTA
TGGGAGCTTGGATGTGGGTGTACGAAGATGCCGCCACGCACTGGAACTGG
GACCTTGGTATCATCACTTTGGGTGGCTGCCTCGTTGGTAGTACCGTTGT
GCGCATTCTCAACTTTCTTGCGAACGGCATCCCGGCGAATGGTTTTGACG
ATTTCCTTCTGAACGACATTGGTAAGCTTGCTCCCTTGCAAGGTTCGACC
TTCTTCCTTAAGGATGCACCTGTGTATCTCCTCATCGGGCTCGTTGGTGG
TTTGGTGGGAGCGATTCTTCCTCTCATCAACAAGTACATCACGTTATTCC
GTTACGAATACGTGAAGCAGCCTAGACGACGTCTGTTCGAAAGCGCGCTC
ATTGCTATAACGACAGCCTTCTTTCGGATTGTTATTCCATATATTGCGAA
TGACTGCCAGCCTATCAATCCCGGACTTCAGGAAGTTCTCAATAATGCAA
AGGACTTCTCCCGGTTTTGTTGTGAGGAAGGCGAGTTTTCACCTTGGGCC
ACCGCGATATACAATCCCTCAGATGCGGTAGTGCGTTCTCTTCTCTTCGC
CAACGATGCGGGAAGTTTCTCCGCTGCCGCAGTGGCAGTTGCTACCGTGT
TCTACCTGGTCTTCATCATATGGACGTACGGTGTTGCGGTTCCGGCCGGT
GTCTTTTTTCCTGGGTTTTTGTTGGGGAGCGTATACGGCCGTCTCATTGG
CATCGCAGTGCAGGCAATTTTTCCCTCTCGTACCGACGTTTCGTTGGGAG
GCTTCGCGTTTGTTGGAGCGGTATCCGCGCTTGCTGGATTCACTAGAACC
ATATCTGTGTCAGTTATCGCTCTGGAAGCTGTCGGTGGCTACACTGGTGC
CTTTGCAGCTGTTTTCGTTGCTGTTATTGCGAAGCTAACCGGAGATTTTC
TCTATAGGCAAGGAATATATGATCTTCACATCGATTTGAAGGGAATTCCT
TTCTTGTCGAACGAAATACCCCGGCTTGAGTCATATGTTCGGCTTCGTGT
ATCCGATGTAATGCAGAGCAAGGTTATTGGGATTCGCCGTCTCTCTAGGA
TTTCTGGCCTGGTTCGGATGCTTGCAACAAATGAGCATCATTCGTTCCCT
GTTTTCTTGAAGCTTACTGCAAGAACTAGCACTTCGCCGCTTGATGTTCC
TGACGTGGGACGCGCCAGTGCAAGAATGTCACGCATGGCAAATGAGTCCA
CTGATTCATTGATGGCTTCTCAGTTAGATCAACTTGAAGCTGATGAGATT
GGCAAGCTGGTTCCGCCATCAACCATTATTACTCCAGATCATATCGGCCT
ACAGGCAACAATTTTCGACGAAGGCACAACTCGACTCGTTACCCTCACAG
ACAAGAAGGAGGTGCTCAACTACAGGAGGTTTGAGAGCAGACATGGCGCA
CCGGAAAGCTTTGTGAACGAAGCACCCACCAAACGCTTGAAGGACGATGA
TGCTTCTCGGGATACATCGTCGGCGTCATTCCAAGGGTTTCCTCGAAAGA
GTCCTTCAAACGAAAGTGAGGTGCCTGAGTTTGAGCTCGTGGGTAGCATT
GATAGAGGAACACTGGTTGCCCTTCTGAAGCATGAGTGTGACAAGCATGA
GCGTGAAGTAGATCGGGACCAGCTCTCAAGGGAAGATCTTGACTCCGCGT
GGCCGAATTCTTCATTACTGAAGAAGAACCATGAAAGCGTGGTGATTAAT
CGCATACGGGAGTTGCAGTTGTTGAACACTGTCATCGACCTCAAGCCACA
TATTAATCCAGACCCGCTGCTCATGTCTGATCGAGCAATGCCGTCCACGG
CATATGTCTTGTTTCGGCGAACTGGGGCTCGTCATATCCTTGTGGCAAAC
ATGCGAGGTGGAAGGGTATGTGGTATCATGACTCGCAAAGATGTGTTACC
GGAAAGTATTACCGATGTCCTCAGTCGTATGCAGGGGGTCAAAGTGGCTT
AG back to topCoding sequence (CDS) from alignment at tig00000059_pilon:530941..533592- >Ggra3493.t1 ID=Ggra3493.t1|Name=Ggra3493.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2652bp|location=Sequence derived from alignment at tig00000059_pilon:530941..533592- (Gracilaria gracilis GNS1m male) ATGTCGCAATCACAGGACCTTGACAACTATACTCTGTCTTATGCTGCATT CTTTGCGCCGCGCACGCACAAGTTTGATACCATAGACTTCCGCTTGTCGC CGTCCCCGGCCAACATCGCCTCGTACTTTCCGACCTCGTCCAAGCAGCGC ATTCGCCACCTCCGCCTCGCAGGCCTGCTGGGAATGGCCGTTGGCTTTGT ATTCGCTCTGGTTGGCTTCGTTGTCGATCAGCTCACCAGGGGGCTCACAA TTGGTCTGTACACAGCCACAGACCGTTTGTTTCGCGTCACCAACTTCTGG GTAGCAGTTCTGCTGTTTATCACCCTCTCCACCGTGTTCGTTCTTATTGC CTCACTCATGGTGGTTTATGTGGCACCTCTCGGAGCTGGCTCTGGAATTC CGGAGTTGAAGAGCTATCTCAATGGTGTCAGAGTGCCGGGCTTTCTCGCT ATAAACTCCTTCTTCGTCAAGGCAATCGGTATAGCATTTAGTCTCGCTGG AGGGCTTGTGTGTGGTAAACAGGGGCCTATGATCCATGCGGCTGCCATTT TGGCTGCAGGCATGAGTCAGGCTGCCAGTTCACGTTTTTCGTGGCGTTGG AGGAGTTCTCTCTTCCGAGTGTTCAGAACAGAAGCATGGAAGCGTGATTT CACAGCTGTTGGTGCTGCTATTGGAGTCGCAGTCGCCTTTGGCTCCCCTA TGGGAGCTTGGATGTGGGTGTACGAAGATGCCGCCACGCACTGGAACTGG GACCTTGGTATCATCACTTTGGGTGGCTGCCTCGTTGGTAGTACCGTTGT GCGCATTCTCAACTTTCTTGCGAACGGCATCCCGGCGAATGGTTTTGACG ATTTCCTTCTGAACGACATTGGTAAGCTTGCTCCCTTGCAAGGTTCGACC TTCTTCCTTAAGGATGCACCTGTGTATCTCCTCATCGGGCTCGTTGGTGG TTTGGTGGGAGCGATTCTTCCTCTCATCAACAAGTACATCACGTTATTCC GTTACGAATACGTGAAGCAGCCTAGACGACGTCTGTTCGAAAGCGCGCTC ATTGCTATAACGACAGCCTTCTTTCGGATTGTTATTCCATATATTGCGAA TGACTGCCAGCCTATCAATCCCGGACTTCAGGAAGTTCTCAATAATGCAA AGGACTTCTCCCGGTTTTGTTGTGAGGAAGGCGAGTTTTCACCTTGGGCC ACCGCGATATACAATCCCTCAGATGCGGTAGTGCGTTCTCTTCTCTTCGC CAACGATGCGGGAAGTTTCTCCGCTGCCGCAGTGGCAGTTGCTACCGTGT TCTACCTGGTCTTCATCATATGGACGTACGGTGTTGCGGTTCCGGCCGGT GTCTTTTTTCCTGGGTTTTTGTTGGGGAGCGTATACGGCCGTCTCATTGG CATCGCAGTGCAGGCAATTTTTCCCTCTCGTACCGACGTTTCGTTGGGAG GCTTCGCGTTTGTTGGAGCGGTATCCGCGCTTGCTGGATTCACTAGAACC ATATCTGTGTCAGTTATCGCTCTGGAAGCTGTCGGTGGCTACACTGGTGC CTTTGCAGCTGTTTTCGTTGCTGTTATTGCGAAGCTAACCGGAGATTTTC TCTATAGGCAAGGAATATATGATCTTCACATCGATTTGAAGGGAATTCCT TTCTTGTCGAACGAAATACCCCGGCTTGAGTCATATGTTCGGCTTCGTGT ATCCGATGTAATGCAGAGCAAGGTTATTGGGATTCGCCGTCTCTCTAGGA TTTCTGGCCTGGTTCGGATGCTTGCAACAAATGAGCATCATTCGTTCCCT GTTTTCTTGAAGCTTACTGCAAGAACTAGCACTTCGCCGCTTGATGTTCC TGACGTGGGACGCGCCAGTGCAAGAATGTCACGCATGGCAAATGAGTCCA CTGATTCATTGATGGCTTCTCAGTTAGATCAACTTGAAGCTGATGAGATT GGCAAGCTGGTTCCGCCATCAACCATTATTACTCCAGATCATATCGGCCT ACAGGCAACAATTTTCGACGAAGGCACAACTCGACTCGTTACCCTCACAG ACAAGAAGGAGGTGCTCAACTACAGGAGGTTTGAGAGCAGACATGGCGCA CCGGAAAGCTTTGTGAACGAAGCACCCACCAAACGCTTGAAGGACGATGA TGCTTCTCGGGATACATCGTCGGCGTCATTCCAAGGGTTTCCTCGAAAGA GTCCTTCAAACGAAAGTGAGGTGCCTGAGTTTGAGCTCGTGGGTAGCATT GATAGAGGAACACTGGTTGCCCTTCTGAAGCATGAGTGTGACAAGCATGA GCGTGAAGTAGATCGGGACCAGCTCTCAAGGGAAGATCTTGACTCCGCGT GGCCGAATTCTTCATTACTGAAGAAGAACCATGAAAGCGTGGTGATTAAT CGCATACGGGAGTTGCAGTTGTTGAACACTGTCATCGACCTCAAGCCACA TATTAATCCAGACCCGCTGCTCATGTCTGATCGAGCAATGCCGTCCACGG CATATGTCTTGTTTCGGCGAACTGGGGCTCGTCATATCCTTGTGGCAAAC ATGCGAGGTGGAAGGGTATGTGGTATCATGACTCGCAAAGATGTGTTACC GGAAAGTATTACCGATGTCCTCAGTCGTATGCAGGGGGTCAAAGTGGCTT AG back to top
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