Ggra3482.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3482.t1
Unique NameGgra3482.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:324407..325522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3482Ggra3482Gracilaria gracilis GNS1m malegenetig00000059_pilon 324407..325522 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3482.t1.start1Ggra3482.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000059_pilon 324407..324409 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3482.t1.CDS1Ggra3482.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000059_pilon 324407..325522 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3482.t1.exon1Ggra3482.t1.exon1Gracilaria gracilis GNS1m maleexontig00000059_pilon 324407..325522 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3482.t1.stop1Ggra3482.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000059_pilon 325520..325522 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3482.t1Ggra3482.t1Gracilaria gracilis GNS1m malepolypeptidetig00000059_pilon 324407..325522 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3482.t1 ID=Ggra3482.t1|Name=Ggra3482.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp
MTVAPPWLLRAAALPLLLLLLLLLLCVRPSSGVSLQAIRIQTTFVALPPS
RGACAQSITHRRMALYRGINRADPNGTYDGLLWRHLLVNGQPCASTHDAL
HSTLFEAQPSPSPAAPTDATSPWFLVGSDNAPRRCDAFSTRLRASYLFTD
DLPRFRARLLRDGLLGADAGADAKRGTVFMFAVPFGSQSTLQGPPCAYVQ
QARAQGVLPVAGADNDAPPDVVLDDGDADAAPSSDVLRGDEPDEDEQDDG
GPACLAAHTELLLADGSARRVDQLRRGDAVAGADAVAGGDGDEVLSFSHW
DARVRTTFVQLHVLLYARRGGAYKVSSTTTLELTRDHVLLTADGRALPAR
ARAAARHAACARCARWRRRPW*
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spliced messenger RNA

>Ggra3482.t1 ID=Ggra3482.t1|Name=Ggra3482.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000059_pilon:324407..325522+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
atgacggtggcgccgccgtggctgctgcgcgccgccgcgctgccgctgtt
gttgctgctgctgctgctgctgctgTGCGTACGCCCAAGCAGCGGCGTGT
CGCTGCAGGCGATCCGCATCCAGACGACGTTCGTGGCGCTGCCGCCGTCG
CGCGGCGCGTGCGCGCAGAGCATCACGCACCGGCGCATGGCGCTGTACCG
CGGCATCAACCGCGCCGACCCGAACGGCACGTACGACGGGCTGCTGTGGC
GCCACCTGCTGGTAAACGGGCAGCCGTGCGCGTCCACGCACGACGCGCTA
CACTCCACGCTGTTCGAGGCGCAAccgtcgccgtcgcccgccgcgccaac
cgacgccacgtcgccgtGGTTCCTGGTCGGGTCCGACAACGCGCCGCGTC
GCTGCGACGCCTTTTCCACGCGCTTGCGCGCGTCGTACCTGTTCACGGAC
GACCTGCCGCGCTTCCGCGCGCGGCTGCTACGCGACGGGCTGCTAGGCGC
CGACGCGGGCGCCGACGCGAAGCGCGGCACCGTGTTCATGTTCGCCGTGC
CGTTCGGCTCGCAAAGCACGCTGCAAGGGCCGCCGTGCGCGTACGTGCAG
CAGGCGCGCGCGCAGGGCGTGCTGCCCGTGGCGGGCGCCGACAACGACGC
GCCGCCGGACGTTGTGCTGGACGATGGCGACGCAGACGCTGCGCCGTCTT
CCGACGTGCTGCGCGGCGACGAGCCGGACGAGGACGAACAAGACGACGGC
GGCCCGGCGTGCCTGGCCGCGCACACGGAGCTGCTGCTGGCGGACGGCTC
CGCGCGCCGCGTGGATCAGCTTCGTCGCGGCGACGCCGTGGCCGGCGCCG
ACGCCGTGGCGGGCGGCGACGGCGACGAGGTGCTGTCGTTCAGCCACTGG
GACGCGCGCGTGCGCACCACGTTCGTGCAGCTGCACGTGCTGCTATACGC
GCGGCGCGGCGGCGCGTATAAAGTTAGCAGCACGACGACGCTGGAGCTGA
CGCGCGACCACGTGCTGCTGACGGCGGACGGACGTGCGCTGCCCGCGCGC
GCCCGCGCGGCGGCGCGGCACGCGGCCTGCGCGCGCTGCGCGCGCTGGCG
GCGGCGGCCGTGGTGA
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protein sequence of Ggra3482.t1

>Ggra3482.t1 ID=Ggra3482.t1|Name=Ggra3482.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MTVAPPWLLRAAALPLLLLLLLLLLCVRPSSGVSLQAIRIQTTFVALPPS
RGACAQSITHRRMALYRGINRADPNGTYDGLLWRHLLVNGQPCASTHDAL
HSTLFEAQPSPSPAAPTDATSPWFLVGSDNAPRRCDAFSTRLRASYLFTD
DLPRFRARLLRDGLLGADAGADAKRGTVFMFAVPFGSQSTLQGPPCAYVQ
QARAQGVLPVAGADNDAPPDVVLDDGDADAAPSSDVLRGDEPDEDEQDDG
GPACLAAHTELLLADGSARRVDQLRRGDAVAGADAVAGGDGDEVLSFSHW
DARVRTTFVQLHVLLYARRGGAYKVSSTTTLELTRDHVLLTADGRALPAR
ARAAARHAACARCARWRRRPW*
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mRNA from alignment at tig00000059_pilon:324407..325522+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3482.t1 ID=Ggra3482.t1|Name=Ggra3482.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000059_pilon:324407..325522+ (Gracilaria gracilis GNS1m male)
atgacggtggcgccgccgtggctgctgcgcgccgccgcgctgccgctgtt
gttgctgctgctgctgctgctgctgTGCGTACGCCCAAGCAGCGGCGTGT
CGCTGCAGGCGATCCGCATCCAGACGACGTTCGTGGCGCTGCCGCCGTCG
CGCGGCGCGTGCGCGCAGAGCATCACGCACCGGCGCATGGCGCTGTACCG
CGGCATCAACCGCGCCGACCCGAACGGCACGTACGACGGGCTGCTGTGGC
GCCACCTGCTGGTAAACGGGCAGCCGTGCGCGTCCACGCACGACGCGCTA
CACTCCACGCTGTTCGAGGCGCAAccgtcgccgtcgcccgccgcgccaac
cgacgccacgtcgccgtGGTTCCTGGTCGGGTCCGACAACGCGCCGCGTC
GCTGCGACGCCTTTTCCACGCGCTTGCGCGCGTCGTACCTGTTCACGGAC
GACCTGCCGCGCTTCCGCGCGCGGCTGCTACGCGACGGGCTGCTAGGCGC
CGACGCGGGCGCCGACGCGAAGCGCGGCACCGTGTTCATGTTCGCCGTGC
CGTTCGGCTCGCAAAGCACGCTGCAAGGGCCGCCGTGCGCGTACGTGCAG
CAGGCGCGCGCGCAGGGCGTGCTGCCCGTGGCGGGCGCCGACAACGACGC
GCCGCCGGACGTTGTGCTGGACGATGGCGACGCAGACGCTGCGCCGTCTT
CCGACGTGCTGCGCGGCGACGAGCCGGACGAGGACGAACAAGACGACGGC
GGCCCGGCGTGCCTGGCCGCGCACACGGAGCTGCTGCTGGCGGACGGCTC
CGCGCGCCGCGTGGATCAGCTTCGTCGCGGCGACGCCGTGGCCGGCGCCG
ACGCCGTGGCGGGCGGCGACGGCGACGAGGTGCTGTCGTTCAGCCACTGG
GACGCGCGCGTGCGCACCACGTTCGTGCAGCTGCACGTGCTGCTATACGC
GCGGCGCGGCGGCGCGTATAAAGTTAGCAGCACGACGACGCTGGAGCTGA
CGCGCGACCACGTGCTGCTGACGGCGGACGGACGTGCGCTGCCCGCGCGC
GCCCGCGCGGCGGCGCGGCACGCGGCCTGCGCGCGCTGCGCGCGCTGGCG
GCGGCGGCCGTGGTGA
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Coding sequence (CDS) from alignment at tig00000059_pilon:324407..325522+

>Ggra3482.t1 ID=Ggra3482.t1|Name=Ggra3482.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1116bp|location=Sequence derived from alignment at tig00000059_pilon:324407..325522+ (Gracilaria gracilis GNS1m male)
atgacggtggcgccgccgtggctgctgcgcgccgccgcgctgccgctgtt
gttgctgctgctgctgctgctgctgTGCGTACGCCCAAGCAGCGGCGTGT
CGCTGCAGGCGATCCGCATCCAGACGACGTTCGTGGCGCTGCCGCCGTCG
CGCGGCGCGTGCGCGCAGAGCATCACGCACCGGCGCATGGCGCTGTACCG
CGGCATCAACCGCGCCGACCCGAACGGCACGTACGACGGGCTGCTGTGGC
GCCACCTGCTGGTAAACGGGCAGCCGTGCGCGTCCACGCACGACGCGCTA
CACTCCACGCTGTTCGAGGCGCAAccgtcgccgtcgcccgccgcgccaac
cgacgccacgtcgccgtGGTTCCTGGTCGGGTCCGACAACGCGCCGCGTC
GCTGCGACGCCTTTTCCACGCGCTTGCGCGCGTCGTACCTGTTCACGGAC
GACCTGCCGCGCTTCCGCGCGCGGCTGCTACGCGACGGGCTGCTAGGCGC
CGACGCGGGCGCCGACGCGAAGCGCGGCACCGTGTTCATGTTCGCCGTGC
CGTTCGGCTCGCAAAGCACGCTGCAAGGGCCGCCGTGCGCGTACGTGCAG
CAGGCGCGCGCGCAGGGCGTGCTGCCCGTGGCGGGCGCCGACAACGACGC
GCCGCCGGACGTTGTGCTGGACGATGGCGACGCAGACGCTGCGCCGTCTT
CCGACGTGCTGCGCGGCGACGAGCCGGACGAGGACGAACAAGACGACGGC
GGCCCGGCGTGCCTGGCCGCGCACACGGAGCTGCTGCTGGCGGACGGCTC
CGCGCGCCGCGTGGATCAGCTTCGTCGCGGCGACGCCGTGGCCGGCGCCG
ACGCCGTGGCGGGCGGCGACGGCGACGAGGTGCTGTCGTTCAGCCACTGG
GACGCGCGCGTGCGCACCACGTTCGTGCAGCTGCACGTGCTGCTATACGC
GCGGCGCGGCGGCGCGTATAAAGTTAGCAGCACGACGACGCTGGAGCTGA
CGCGCGACCACGTGCTGCTGACGGCGGACGGACGTGCGCTGCCCGCGCGC
GCCCGCGCGGCGGCGCGGCACGCGGCCTGCGCGCGCTGCGCGCGCTGGCG
GCGGCGGCCGTGGTGA
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