Ggra3463.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3463.t1
Unique NameGgra3463.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length184
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:186478..187029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3463Ggra3463Gracilaria gracilis GNS1m malegenetig00000059_pilon 186478..187029 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3463.t1.start1Ggra3463.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000059_pilon 186478..186480 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3463.t1.CDS1Ggra3463.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000059_pilon 186478..187029 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3463.t1.exon1Ggra3463.t1.exon1Gracilaria gracilis GNS1m maleexontig00000059_pilon 186478..187029 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3463.t1.stop1Ggra3463.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000059_pilon 187027..187029 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3463.t1Ggra3463.t1Gracilaria gracilis GNS1m malepolypeptidetig00000059_pilon 186478..187029 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3463.t1 ID=Ggra3463.t1|Name=Ggra3463.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=184bp
MDDTSSWQDSESDSYVRKLTEEGGSREDMEINNHRDKSEKPLKAGLYEQR
SEAAESGDVEMGQSGLDDEFDTPMRGEDEYRNPQRIGGKRDSLRNEDGSC
KGDEPRLHQEVTLEVWIERSKAARRQRSRAKYWRGNNVRYGMSRREYAGK
WDDGRNWGGKPTFRYGRYGRRGGRSGYGGNESY*
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spliced messenger RNA

>Ggra3463.t1 ID=Ggra3463.t1|Name=Ggra3463.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp|location=Sequence derived from alignment at tig00000059_pilon:186478..187029+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGACACATCATCTTGGCAGGATTCTGAATCGGATTCGTATGTGAG
AAAGCTCACGGAAGAAGGGGGTTCGAGAGAGGATATGGAAATCAACAATC
ATCGTGACAAGAGTGAGAAGCCTCTGAAAGCTGGACTATATGAACAGCGG
AGTGAGGCTGCGGAATCGGGAGATGTAGAGATGGGTCAGTCTGGTTTGGA
CGATGAGTTTGATACGCCAATGCGTGGTGAAGATGAGTATAGAAACCCGC
AACGCATAGGGGGGAAACGAGACAGCTTGAGGAATGAAGATGGGTCATGC
AAGGGAGATGAACCACGTCTGCATCAAGAAGTGACTCTGGAGGTGTGGAT
TGAGCGCTCAAAGGCCGCACGCAGACAGAGGTCCCGAGCGAAATATTGGC
GCGGAAACAATGTCAGGTATGGAATGAGTCGAAGAGAATACGCAGGAAAA
TGGGATGATGGACGTAACTGGGGAGGTAAGCCCACATTTCGTTATGGAAG
ATATGGACGACGAGGTGGGCGCAGTGGATATGGCGGGAACGAAAGCTACT
AA
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protein sequence of Ggra3463.t1

>Ggra3463.t1 ID=Ggra3463.t1|Name=Ggra3463.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=184bp
MDDTSSWQDSESDSYVRKLTEEGGSREDMEINNHRDKSEKPLKAGLYEQR
SEAAESGDVEMGQSGLDDEFDTPMRGEDEYRNPQRIGGKRDSLRNEDGSC
KGDEPRLHQEVTLEVWIERSKAARRQRSRAKYWRGNNVRYGMSRREYAGK
WDDGRNWGGKPTFRYGRYGRRGGRSGYGGNESY*
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mRNA from alignment at tig00000059_pilon:186478..187029+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3463.t1 ID=Ggra3463.t1|Name=Ggra3463.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp|location=Sequence derived from alignment at tig00000059_pilon:186478..187029+ (Gracilaria gracilis GNS1m male)
ATGGACGACACATCATCTTGGCAGGATTCTGAATCGGATTCGTATGTGAG
AAAGCTCACGGAAGAAGGGGGTTCGAGAGAGGATATGGAAATCAACAATC
ATCGTGACAAGAGTGAGAAGCCTCTGAAAGCTGGACTATATGAACAGCGG
AGTGAGGCTGCGGAATCGGGAGATGTAGAGATGGGTCAGTCTGGTTTGGA
CGATGAGTTTGATACGCCAATGCGTGGTGAAGATGAGTATAGAAACCCGC
AACGCATAGGGGGGAAACGAGACAGCTTGAGGAATGAAGATGGGTCATGC
AAGGGAGATGAACCACGTCTGCATCAAGAAGTGACTCTGGAGGTGTGGAT
TGAGCGCTCAAAGGCCGCACGCAGACAGAGGTCCCGAGCGAAATATTGGC
GCGGAAACAATGTCAGGTATGGAATGAGTCGAAGAGAATACGCAGGAAAA
TGGGATGATGGACGTAACTGGGGAGGTAAGCCCACATTTCGTTATGGAAG
ATATGGACGACGAGGTGGGCGCAGTGGATATGGCGGGAACGAAAGCTACT
AA
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Coding sequence (CDS) from alignment at tig00000059_pilon:186478..187029+

>Ggra3463.t1 ID=Ggra3463.t1|Name=Ggra3463.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=552bp|location=Sequence derived from alignment at tig00000059_pilon:186478..187029+ (Gracilaria gracilis GNS1m male)
ATGGACGACACATCATCTTGGCAGGATTCTGAATCGGATTCGTATGTGAG
AAAGCTCACGGAAGAAGGGGGTTCGAGAGAGGATATGGAAATCAACAATC
ATCGTGACAAGAGTGAGAAGCCTCTGAAAGCTGGACTATATGAACAGCGG
AGTGAGGCTGCGGAATCGGGAGATGTAGAGATGGGTCAGTCTGGTTTGGA
CGATGAGTTTGATACGCCAATGCGTGGTGAAGATGAGTATAGAAACCCGC
AACGCATAGGGGGGAAACGAGACAGCTTGAGGAATGAAGATGGGTCATGC
AAGGGAGATGAACCACGTCTGCATCAAGAAGTGACTCTGGAGGTGTGGAT
TGAGCGCTCAAAGGCCGCACGCAGACAGAGGTCCCGAGCGAAATATTGGC
GCGGAAACAATGTCAGGTATGGAATGAGTCGAAGAGAATACGCAGGAAAA
TGGGATGATGGACGTAACTGGGGAGGTAAGCCCACATTTCGTTATGGAAG
ATATGGACGACGAGGTGGGCGCAGTGGATATGGCGGGAACGAAAGCTACT
AA
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