Ggra3453.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3453.t1
Unique NameGgra3453.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length109
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:158007..158333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3453Ggra3453Gracilaria gracilis GNS1m malegenetig00000059_pilon 158007..158333 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3453.t1.stop1Ggra3453.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000059_pilon 158007..158009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3453.t1.CDS1Ggra3453.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000059_pilon 158007..158333 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3453.t1.exon1Ggra3453.t1.exon1Gracilaria gracilis GNS1m maleexontig00000059_pilon 158007..158333 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3453.t1.start1Ggra3453.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000059_pilon 158331..158333 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3453.t1Ggra3453.t1Gracilaria gracilis GNS1m malepolypeptidetig00000059_pilon 158007..158333 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3453.t1 ID=Ggra3453.t1|Name=Ggra3453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=109bp
MASNSLLDGVLNLRVPLAYEVLRSQSNGGLVHMQVTSDAGVMGGKFIAFI
FIGRPSLNLDLATRRNVDTDSVDGGTVLGVYCDGAQFQAQPVDALQEGDG
EHSTTNND*
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spliced messenger RNA

>Ggra3453.t1 ID=Ggra3453.t1|Name=Ggra3453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=327bp|location=Sequence derived from alignment at tig00000059_pilon:158007..158333- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAGCAACAGTCTTCTGGATGGAGTCCTCAATCTCCGAGTCCCTCT
TGCCTATGAAGTGCTGCGCAGCCAGTCGAATGGCGGATTGGTCCATATGC
AAGTCACCTCCGACGCGGGCGTGATGGGGGGGAAGTTCATCGCCTTCATC
TTCATTGGTAGACCATCCCTGAATCTTGACCTGGCAACACGACGTAACGT
TGACACTGACTCCGTTGACGGTGGTACCGTGCTCGGTGTGTACTGTGATG
GTGCGCAGTTCCAAGCCCAACCTGTCGACGCGTTGCAGGAAGGGGATGGC
GAACATTCGACCACCAATAATGACTGA
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protein sequence of Ggra3453.t1

>Ggra3453.t1 ID=Ggra3453.t1|Name=Ggra3453.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=109bp
MASNSLLDGVLNLRVPLAYEVLRSQSNGGLVHMQVTSDAGVMGGKFIAFI
FIGRPSLNLDLATRRNVDTDSVDGGTVLGVYCDGAQFQAQPVDALQEGDG
EHSTTNND*
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mRNA from alignment at tig00000059_pilon:158007..158333-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3453.t1 ID=Ggra3453.t1|Name=Ggra3453.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=327bp|location=Sequence derived from alignment at tig00000059_pilon:158007..158333- (Gracilaria gracilis GNS1m male)
ATGGCCAGCAACAGTCTTCTGGATGGAGTCCTCAATCTCCGAGTCCCTCT
TGCCTATGAAGTGCTGCGCAGCCAGTCGAATGGCGGATTGGTCCATATGC
AAGTCACCTCCGACGCGGGCGTGATGGGGGGGAAGTTCATCGCCTTCATC
TTCATTGGTAGACCATCCCTGAATCTTGACCTGGCAACACGACGTAACGT
TGACACTGACTCCGTTGACGGTGGTACCGTGCTCGGTGTGTACTGTGATG
GTGCGCAGTTCCAAGCCCAACCTGTCGACGCGTTGCAGGAAGGGGATGGC
GAACATTCGACCACCAATAATGACTGA
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Coding sequence (CDS) from alignment at tig00000059_pilon:158007..158333-

>Ggra3453.t1 ID=Ggra3453.t1|Name=Ggra3453.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=327bp|location=Sequence derived from alignment at tig00000059_pilon:158007..158333- (Gracilaria gracilis GNS1m male)
ATGGCCAGCAACAGTCTTCTGGATGGAGTCCTCAATCTCCGAGTCCCTCT
TGCCTATGAAGTGCTGCGCAGCCAGTCGAATGGCGGATTGGTCCATATGC
AAGTCACCTCCGACGCGGGCGTGATGGGGGGGAAGTTCATCGCCTTCATC
TTCATTGGTAGACCATCCCTGAATCTTGACCTGGCAACACGACGTAACGT
TGACACTGACTCCGTTGACGGTGGTACCGTGCTCGGTGTGTACTGTGATG
GTGCGCAGTTCCAAGCCCAACCTGTCGACGCGTTGCAGGAAGGGGATGGC
GAACATTCGACCACCAATAATGACTGA
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