Ggra3437.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3437.t1
Unique NameGgra3437.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length179
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:44509..45045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3437Ggra3437Gracilaria gracilis GNS1m malegenetig00000059_pilon 44509..45045 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3437.t1.stop1Ggra3437.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000059_pilon 44509..44511 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3437.t1.CDS1Ggra3437.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000059_pilon 44509..45045 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3437.t1.exon1Ggra3437.t1.exon1Gracilaria gracilis GNS1m maleexontig00000059_pilon 44509..45045 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3437.t1.start1Ggra3437.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000059_pilon 45043..45045 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3437.t1Ggra3437.t1Gracilaria gracilis GNS1m malepolypeptidetig00000059_pilon 44509..45045 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3437.t1 ID=Ggra3437.t1|Name=Ggra3437.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=179bp
MQPSGLFGVGYKERTEFKDTPFSDALSLNAYGVRSEQIALLTIACQTATF
TWRSKDKRSSAIALTPKLESWVPLALAKMQISAGEARFLEQHRRRLRFCV
DFPTPLFGFQVVAESLVNDDQMIVDLYHVCFAMDNGHIQLKVQPALECDS
LPVMNTSYLPLRKKGTCHDEKHLGCNIA*
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spliced messenger RNA

>Ggra3437.t1 ID=Ggra3437.t1|Name=Ggra3437.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=537bp|location=Sequence derived from alignment at tig00000059_pilon:44509..45045- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCCTAGTGGCCTTTTTGGGGTTGGCTACAAAGAGCGCACCGAATT
CAAGGACACGCCTTTCAGCGACGCACTCTCTCTAAACGCATATGGCGTTC
GTTCCGAGCAGATCGCTTTACTTACCATCGCGTGTCAAACCGCCACTTTC
ACCTGGCGTTCCAAAGACAAACGTTCGTCCGCCATTGCCCTCACTCCGAA
ACTTGAGTCGTGGGTCCCGCTTGCGCTTGCAAAGATGCAAATTTCAGCTG
GTGAAGCCCGCTTTCTCGAACAACACAGACGGCGACTCCGCTTTTGCGTT
GATTTTCCAACGCCTTTGTTCGGTTTTCAAGTAGTCGCTGAATCTCTCGT
AAACGATGATCAAATGATTGTTGATCTGTATCATGTGTGTTTTGCGATGG
ACAACGGCCATATCCAGCTCAAGGTCCAACCTGCACTTGAATGTGATTCT
CTTCCGGTGATGAATACTTCATACCTGCCATTGAGAAAGAAGGGTACATG
TCACGATGAAAAACACCTAGGCTGCAACATTGCTTGA
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protein sequence of Ggra3437.t1

>Ggra3437.t1 ID=Ggra3437.t1|Name=Ggra3437.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=179bp
MQPSGLFGVGYKERTEFKDTPFSDALSLNAYGVRSEQIALLTIACQTATF
TWRSKDKRSSAIALTPKLESWVPLALAKMQISAGEARFLEQHRRRLRFCV
DFPTPLFGFQVVAESLVNDDQMIVDLYHVCFAMDNGHIQLKVQPALECDS
LPVMNTSYLPLRKKGTCHDEKHLGCNIA*
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mRNA from alignment at tig00000059_pilon:44509..45045-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3437.t1 ID=Ggra3437.t1|Name=Ggra3437.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=537bp|location=Sequence derived from alignment at tig00000059_pilon:44509..45045- (Gracilaria gracilis GNS1m male)
ATGCAGCCTAGTGGCCTTTTTGGGGTTGGCTACAAAGAGCGCACCGAATT
CAAGGACACGCCTTTCAGCGACGCACTCTCTCTAAACGCATATGGCGTTC
GTTCCGAGCAGATCGCTTTACTTACCATCGCGTGTCAAACCGCCACTTTC
ACCTGGCGTTCCAAAGACAAACGTTCGTCCGCCATTGCCCTCACTCCGAA
ACTTGAGTCGTGGGTCCCGCTTGCGCTTGCAAAGATGCAAATTTCAGCTG
GTGAAGCCCGCTTTCTCGAACAACACAGACGGCGACTCCGCTTTTGCGTT
GATTTTCCAACGCCTTTGTTCGGTTTTCAAGTAGTCGCTGAATCTCTCGT
AAACGATGATCAAATGATTGTTGATCTGTATCATGTGTGTTTTGCGATGG
ACAACGGCCATATCCAGCTCAAGGTCCAACCTGCACTTGAATGTGATTCT
CTTCCGGTGATGAATACTTCATACCTGCCATTGAGAAAGAAGGGTACATG
TCACGATGAAAAACACCTAGGCTGCAACATTGCTTGA
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Coding sequence (CDS) from alignment at tig00000059_pilon:44509..45045-

>Ggra3437.t1 ID=Ggra3437.t1|Name=Ggra3437.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=537bp|location=Sequence derived from alignment at tig00000059_pilon:44509..45045- (Gracilaria gracilis GNS1m male)
ATGCAGCCTAGTGGCCTTTTTGGGGTTGGCTACAAAGAGCGCACCGAATT
CAAGGACACGCCTTTCAGCGACGCACTCTCTCTAAACGCATATGGCGTTC
GTTCCGAGCAGATCGCTTTACTTACCATCGCGTGTCAAACCGCCACTTTC
ACCTGGCGTTCCAAAGACAAACGTTCGTCCGCCATTGCCCTCACTCCGAA
ACTTGAGTCGTGGGTCCCGCTTGCGCTTGCAAAGATGCAAATTTCAGCTG
GTGAAGCCCGCTTTCTCGAACAACACAGACGGCGACTCCGCTTTTGCGTT
GATTTTCCAACGCCTTTGTTCGGTTTTCAAGTAGTCGCTGAATCTCTCGT
AAACGATGATCAAATGATTGTTGATCTGTATCATGTGTGTTTTGCGATGG
ACAACGGCCATATCCAGCTCAAGGTCCAACCTGCACTTGAATGTGATTCT
CTTCCGGTGATGAATACTTCATACCTGCCATTGAGAAAGAAGGGTACATG
TCACGATGAAAAACACCTAGGCTGCAACATTGCTTGA
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