Ggra343.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra343.t1
Unique NameGgra343.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length371
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:26990..28102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra343Ggra343Gracilaria gracilis GNS1m malegenetig00000950_pilon 26990..28102 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra343.t1.start1Ggra343.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000950_pilon 26990..26992 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra343.t1.CDS1Ggra343.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000950_pilon 26990..28102 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra343.t1.exon1Ggra343.t1.exon1Gracilaria gracilis GNS1m maleexontig00000950_pilon 26990..28102 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra343.t1.stop1Ggra343.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000950_pilon 28100..28102 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra343.t1Ggra343.t1Gracilaria gracilis GNS1m malepolypeptidetig00000950_pilon 26990..28102 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra343.t1 ID=Ggra343.t1|Name=Ggra343.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=371bp
MVVIRLKSPFVSLIFSTISVFAEFALFTAIVLFNRYVECVALQKGRSISV
RRHQRRVNIISYTALLIFFILEIVTSFVTEPALRLPLTDQQCIATDALPR
LEQSSGVFPEEVTIIVECIGFKNNSVVVRAGNYSKVEKRVKCSNSTLIDF
PVLSPVEYILDGANEPSSENPNPDPLLFCRDGGCVVARTVRSEAGSGGTL
IGMSDFIERESLNLLREEQTPLPVLYTTIYFECEGCLQRFARRLLSAYNQ
NSSDPMESRRRAFLGSEERTCPFGEELSDTEVPIGLVYSVTVVWALSFLS
VLATILLRRHIFYDISNPLHWAKKTKHSDDQLIDGDPIVMTIHENGKQVV
YVSGTASEATDMVSRFAFGM*
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spliced messenger RNA

>Ggra343.t1 ID=Ggra343.t1|Name=Ggra343.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1113bp|location=Sequence derived from alignment at tig00000950_pilon:26990..28102+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGTTATTCGTCTCAAGTCGCCGTTTGTCAGCCTTATCTTCTCAAC
TATTTCAGTGTTTGCAGAATTCGCTCTTTTCACAGCTATCGTGCTCTTCA
ATCGCTACGTTGAGTGCGTCGCTCTGCAAAAGGGGCGCTCAATAAGTGTG
CGTCGTCATCAACGTCGAGTGAACATAATTTCTTATACAGCGCTGCTCAT
CTTCTTTATTCTGGAAATCGTCACCTCATTTGTCACCGAACCGGCGCTCA
GACTGCCTCTTACCGATCAGCAATGCATCGCTACCGATGCACTCCCGCGT
CTGGAGCAGTCCTCCGGTGTGTTTCCGGAGGAAGTCACAATCATTGTGGA
ATGCATTGGCTTCAAAAACAATTCGGTTGTGGTTCGAGCTGGAAATTACA
GCAAAGTGGAGAAGAGAGTGAAATGCAGTAACTCGACGCTCATCGATTTC
CCCGTTCTAAGTCCTGTGGAATATATTCTTGACGGCGCAAACGAGCCTTC
GTCAGAAAACCCAAATCCTGATCCTCTACTTTTCTGTCGTGACGGCGGCT
GTGTAGTTGCTCGAACAGTACGCTCGGAGGCTGGCTCGGGCGGTACGTTG
ATAGGCATGTCAGACTTTATCGAGAGGGAAAGTCTAAACCTACTACGCGA
GGAACAAACACCACTTCCAGTGTTGTACACTACTATATATTTTGAATGCG
AGGGTTGTCTGCAACGGTTTGCAAGACGTCTGTTGAGTGCCTATAATCAA
AACAGTAGCGATCCTATGGAGTCTCGCCGTAGAGCGTTCTTAGGTTCAGA
AGAACGCACATGTCCGTTCGGCGAAGAATTATCAGATACGGAAGTTCCAA
TAGGTCTGGTGTACAGCGTAACTGTCGTGTGGGCTCTATCATTCTTATCA
GTCTTGGCAACCATCTTGCTTAGACGGCACATATTTTACGATATTAGTAA
CCCCTTACATTGGGCCAAGAAGACGAAGCACAGCGATGATCAACTGATTG
ACGGAGATCCTATTGTCATGACTATTCACGAAAATGGAAAACAGGTAGTT
TACGTATCTGGTACTGCTTCCGAGGCTACTGATATGGTCAGCAGGTTTGC
ATTCGGGATGTGA
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protein sequence of Ggra343.t1

>Ggra343.t1 ID=Ggra343.t1|Name=Ggra343.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=371bp
MVVIRLKSPFVSLIFSTISVFAEFALFTAIVLFNRYVECVALQKGRSISV
RRHQRRVNIISYTALLIFFILEIVTSFVTEPALRLPLTDQQCIATDALPR
LEQSSGVFPEEVTIIVECIGFKNNSVVVRAGNYSKVEKRVKCSNSTLIDF
PVLSPVEYILDGANEPSSENPNPDPLLFCRDGGCVVARTVRSEAGSGGTL
IGMSDFIERESLNLLREEQTPLPVLYTTIYFECEGCLQRFARRLLSAYNQ
NSSDPMESRRRAFLGSEERTCPFGEELSDTEVPIGLVYSVTVVWALSFLS
VLATILLRRHIFYDISNPLHWAKKTKHSDDQLIDGDPIVMTIHENGKQVV
YVSGTASEATDMVSRFAFGM*
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mRNA from alignment at tig00000950_pilon:26990..28102+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra343.t1 ID=Ggra343.t1|Name=Ggra343.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1113bp|location=Sequence derived from alignment at tig00000950_pilon:26990..28102+ (Gracilaria gracilis GNS1m male)
ATGGTGGTTATTCGTCTCAAGTCGCCGTTTGTCAGCCTTATCTTCTCAAC
TATTTCAGTGTTTGCAGAATTCGCTCTTTTCACAGCTATCGTGCTCTTCA
ATCGCTACGTTGAGTGCGTCGCTCTGCAAAAGGGGCGCTCAATAAGTGTG
CGTCGTCATCAACGTCGAGTGAACATAATTTCTTATACAGCGCTGCTCAT
CTTCTTTATTCTGGAAATCGTCACCTCATTTGTCACCGAACCGGCGCTCA
GACTGCCTCTTACCGATCAGCAATGCATCGCTACCGATGCACTCCCGCGT
CTGGAGCAGTCCTCCGGTGTGTTTCCGGAGGAAGTCACAATCATTGTGGA
ATGCATTGGCTTCAAAAACAATTCGGTTGTGGTTCGAGCTGGAAATTACA
GCAAAGTGGAGAAGAGAGTGAAATGCAGTAACTCGACGCTCATCGATTTC
CCCGTTCTAAGTCCTGTGGAATATATTCTTGACGGCGCAAACGAGCCTTC
GTCAGAAAACCCAAATCCTGATCCTCTACTTTTCTGTCGTGACGGCGGCT
GTGTAGTTGCTCGAACAGTACGCTCGGAGGCTGGCTCGGGCGGTACGTTG
ATAGGCATGTCAGACTTTATCGAGAGGGAAAGTCTAAACCTACTACGCGA
GGAACAAACACCACTTCCAGTGTTGTACACTACTATATATTTTGAATGCG
AGGGTTGTCTGCAACGGTTTGCAAGACGTCTGTTGAGTGCCTATAATCAA
AACAGTAGCGATCCTATGGAGTCTCGCCGTAGAGCGTTCTTAGGTTCAGA
AGAACGCACATGTCCGTTCGGCGAAGAATTATCAGATACGGAAGTTCCAA
TAGGTCTGGTGTACAGCGTAACTGTCGTGTGGGCTCTATCATTCTTATCA
GTCTTGGCAACCATCTTGCTTAGACGGCACATATTTTACGATATTAGTAA
CCCCTTACATTGGGCCAAGAAGACGAAGCACAGCGATGATCAACTGATTG
ACGGAGATCCTATTGTCATGACTATTCACGAAAATGGAAAACAGGTAGTT
TACGTATCTGGTACTGCTTCCGAGGCTACTGATATGGTCAGCAGGTTTGC
ATTCGGGATGTGA
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Coding sequence (CDS) from alignment at tig00000950_pilon:26990..28102+

>Ggra343.t1 ID=Ggra343.t1|Name=Ggra343.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1113bp|location=Sequence derived from alignment at tig00000950_pilon:26990..28102+ (Gracilaria gracilis GNS1m male)
ATGGTGGTTATTCGTCTCAAGTCGCCGTTTGTCAGCCTTATCTTCTCAAC
TATTTCAGTGTTTGCAGAATTCGCTCTTTTCACAGCTATCGTGCTCTTCA
ATCGCTACGTTGAGTGCGTCGCTCTGCAAAAGGGGCGCTCAATAAGTGTG
CGTCGTCATCAACGTCGAGTGAACATAATTTCTTATACAGCGCTGCTCAT
CTTCTTTATTCTGGAAATCGTCACCTCATTTGTCACCGAACCGGCGCTCA
GACTGCCTCTTACCGATCAGCAATGCATCGCTACCGATGCACTCCCGCGT
CTGGAGCAGTCCTCCGGTGTGTTTCCGGAGGAAGTCACAATCATTGTGGA
ATGCATTGGCTTCAAAAACAATTCGGTTGTGGTTCGAGCTGGAAATTACA
GCAAAGTGGAGAAGAGAGTGAAATGCAGTAACTCGACGCTCATCGATTTC
CCCGTTCTAAGTCCTGTGGAATATATTCTTGACGGCGCAAACGAGCCTTC
GTCAGAAAACCCAAATCCTGATCCTCTACTTTTCTGTCGTGACGGCGGCT
GTGTAGTTGCTCGAACAGTACGCTCGGAGGCTGGCTCGGGCGGTACGTTG
ATAGGCATGTCAGACTTTATCGAGAGGGAAAGTCTAAACCTACTACGCGA
GGAACAAACACCACTTCCAGTGTTGTACACTACTATATATTTTGAATGCG
AGGGTTGTCTGCAACGGTTTGCAAGACGTCTGTTGAGTGCCTATAATCAA
AACAGTAGCGATCCTATGGAGTCTCGCCGTAGAGCGTTCTTAGGTTCAGA
AGAACGCACATGTCCGTTCGGCGAAGAATTATCAGATACGGAAGTTCCAA
TAGGTCTGGTGTACAGCGTAACTGTCGTGTGGGCTCTATCATTCTTATCA
GTCTTGGCAACCATCTTGCTTAGACGGCACATATTTTACGATATTAGTAA
CCCCTTACATTGGGCCAAGAAGACGAAGCACAGCGATGATCAACTGATTG
ACGGAGATCCTATTGTCATGACTATTCACGAAAATGGAAAACAGGTAGTT
TACGTATCTGGTACTGCTTCCGAGGCTACTGATATGGTCAGCAGGTTTGC
ATTCGGGATGTGA
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