Ggra3403.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3403.t1
Unique NameGgra3403.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length378
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:228636..229769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3403Ggra3403Gracilaria gracilis GNS1m malegenetig00000905_pilon 228636..229769 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3403.t1.stop1Ggra3403.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000905_pilon 228636..228638 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3403.t1.CDS1Ggra3403.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000905_pilon 228636..229769 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3403.t1.exon1Ggra3403.t1.exon1Gracilaria gracilis GNS1m maleexontig00000905_pilon 228636..229769 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3403.t1.start1Ggra3403.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000905_pilon 229767..229769 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3403.t1Ggra3403.t1Gracilaria gracilis GNS1m malepolypeptidetig00000905_pilon 228636..229769 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3403.t1 ID=Ggra3403.t1|Name=Ggra3403.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=378bp
MAEQMNEAKVKERIGDTINQTLKNIVRQTNEDPVDQEDEGIVSPEVTEWI
DMLFLIAGAGFSLKMGMLWAESRMLRKLKSPVSNVGKDLEEEDVKKRFAL
MVLSLCKGRNKVFSRIFPQLYQFFIIGSGSWGILVGDLYFMDSFLAIVLP
SMVGSFTVLGAGVLKSHEVVGIFVIIIGYGVLVYAAAIGWLGTSQPQVFA
VAQYIEWGTVLFTLADTFFDYLKSLITWDSDIFSIAHSISKGCETRRQEE
RRIEMESIAFPSEPMENPRTRHRYWDISVRRVFVDLVLFATNCTTTVILL
QNVGSPFQAARLVSLEMLDMASVILLSVNGALVEPTLFIKLLKLARETSE
VDDDKKTEREGESGLMQPSKEGKLERL*
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spliced messenger RNA

>Ggra3403.t1 ID=Ggra3403.t1|Name=Ggra3403.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000905_pilon:228636..229769- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGCAGATGAATGAAGCTAAGGTGAAAGAGAGGATTGGAGACAC
CATAAATCAGACTCTTAAAAACATCGTACGGCAGACGAATGAAGACCCCG
TAGACCAGGAGGACGAAGGCATTGTATCGCCAGAGGTAACAGAATGGATC
GACATGCTGTTTCTTATTGCGGGCGCAGGTTTTTCGTTGAAGATGGGCAT
GTTATGGGCCGAATCTCGAATGCTACGAAAGCTGAAAAGTCCAGTGAGTA
ACGTGGGAAAGGATTTGGAAGAAGAAGATGTGAAGAAACGTTTTGCCCTC
ATGGTTCTGTCGCTATGTAAAGGACGTAACAAGGTATTCAGTCGAATATT
TCCTCAACTGTATCAATTCTTTATTATTGGGTCAGGATCTTGGGGGATTC
TTGTCGGCGATTTATACTTCATGGACTCTTTTTTGGCCATTGTTTTGCCC
AGTATGGTTGGCTCTTTTACAGTTCTTGGTGCGGGCGTCTTGAAATCCCA
TGAAGTTGTAGGAATATTTGTGATAATTATCGGCTATGGTGTATTGGTCT
ACGCTGCTGCAATTGGCTGGTTGGGCACTTCTCAACCTCAGGTATTTGCT
GTTGCCCAATACATTGAATGGGGTACCGTTTTATTCACTCTGGCAGATAC
ATTCTTCGACTACCTGAAAAGCCTTATCACATGGGATAGCGACATCTTTA
GCATTGCTCACTCAATATCGAAAGGGTGTGAGACCAGGAGGCAAGAAGAG
CGTCGTATTGAAATGGAGAGCATAGCCTTCCCAAGCGAACCTATGGAAAA
CCCTCGTACAAGACATCGCTATTGGGACATATCTGTAAGAAGAGTTTTTG
TAGATCTGGTTTTATTCGCTACAAATTGCACGACCACTGTGATTTTATTA
CAGAATGTTGGTTCACCGTTCCAAGCGGCTCGTCTTGTGAGTTTGGAGAT
GTTGGACATGGCTTCTGTGATTTTGTTGTCTGTGAACGGTGCTCTGGTAG
AACCGACGTTGTTCATTAAGTTGCTAAAGCTGGCGCGAGAAACTTCCGAA
GTTGATGATGATAAGAAAACTGAACGTGAAGGAGAGTCTGGGCTTATGCA
GCCTTCGAAAGAGGGCAAGCTGGAGCGTCTTTAG
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protein sequence of Ggra3403.t1

>Ggra3403.t1 ID=Ggra3403.t1|Name=Ggra3403.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=378bp
MAEQMNEAKVKERIGDTINQTLKNIVRQTNEDPVDQEDEGIVSPEVTEWI
DMLFLIAGAGFSLKMGMLWAESRMLRKLKSPVSNVGKDLEEEDVKKRFAL
MVLSLCKGRNKVFSRIFPQLYQFFIIGSGSWGILVGDLYFMDSFLAIVLP
SMVGSFTVLGAGVLKSHEVVGIFVIIIGYGVLVYAAAIGWLGTSQPQVFA
VAQYIEWGTVLFTLADTFFDYLKSLITWDSDIFSIAHSISKGCETRRQEE
RRIEMESIAFPSEPMENPRTRHRYWDISVRRVFVDLVLFATNCTTTVILL
QNVGSPFQAARLVSLEMLDMASVILLSVNGALVEPTLFIKLLKLARETSE
VDDDKKTEREGESGLMQPSKEGKLERL*
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mRNA from alignment at tig00000905_pilon:228636..229769-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3403.t1 ID=Ggra3403.t1|Name=Ggra3403.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000905_pilon:228636..229769- (Gracilaria gracilis GNS1m male)
ATGGCGGAGCAGATGAATGAAGCTAAGGTGAAAGAGAGGATTGGAGACAC
CATAAATCAGACTCTTAAAAACATCGTACGGCAGACGAATGAAGACCCCG
TAGACCAGGAGGACGAAGGCATTGTATCGCCAGAGGTAACAGAATGGATC
GACATGCTGTTTCTTATTGCGGGCGCAGGTTTTTCGTTGAAGATGGGCAT
GTTATGGGCCGAATCTCGAATGCTACGAAAGCTGAAAAGTCCAGTGAGTA
ACGTGGGAAAGGATTTGGAAGAAGAAGATGTGAAGAAACGTTTTGCCCTC
ATGGTTCTGTCGCTATGTAAAGGACGTAACAAGGTATTCAGTCGAATATT
TCCTCAACTGTATCAATTCTTTATTATTGGGTCAGGATCTTGGGGGATTC
TTGTCGGCGATTTATACTTCATGGACTCTTTTTTGGCCATTGTTTTGCCC
AGTATGGTTGGCTCTTTTACAGTTCTTGGTGCGGGCGTCTTGAAATCCCA
TGAAGTTGTAGGAATATTTGTGATAATTATCGGCTATGGTGTATTGGTCT
ACGCTGCTGCAATTGGCTGGTTGGGCACTTCTCAACCTCAGGTATTTGCT
GTTGCCCAATACATTGAATGGGGTACCGTTTTATTCACTCTGGCAGATAC
ATTCTTCGACTACCTGAAAAGCCTTATCACATGGGATAGCGACATCTTTA
GCATTGCTCACTCAATATCGAAAGGGTGTGAGACCAGGAGGCAAGAAGAG
CGTCGTATTGAAATGGAGAGCATAGCCTTCCCAAGCGAACCTATGGAAAA
CCCTCGTACAAGACATCGCTATTGGGACATATCTGTAAGAAGAGTTTTTG
TAGATCTGGTTTTATTCGCTACAAATTGCACGACCACTGTGATTTTATTA
CAGAATGTTGGTTCACCGTTCCAAGCGGCTCGTCTTGTGAGTTTGGAGAT
GTTGGACATGGCTTCTGTGATTTTGTTGTCTGTGAACGGTGCTCTGGTAG
AACCGACGTTGTTCATTAAGTTGCTAAAGCTGGCGCGAGAAACTTCCGAA
GTTGATGATGATAAGAAAACTGAACGTGAAGGAGAGTCTGGGCTTATGCA
GCCTTCGAAAGAGGGCAAGCTGGAGCGTCTTTAG
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Coding sequence (CDS) from alignment at tig00000905_pilon:228636..229769-

>Ggra3403.t1 ID=Ggra3403.t1|Name=Ggra3403.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1134bp|location=Sequence derived from alignment at tig00000905_pilon:228636..229769- (Gracilaria gracilis GNS1m male)
ATGGCGGAGCAGATGAATGAAGCTAAGGTGAAAGAGAGGATTGGAGACAC
CATAAATCAGACTCTTAAAAACATCGTACGGCAGACGAATGAAGACCCCG
TAGACCAGGAGGACGAAGGCATTGTATCGCCAGAGGTAACAGAATGGATC
GACATGCTGTTTCTTATTGCGGGCGCAGGTTTTTCGTTGAAGATGGGCAT
GTTATGGGCCGAATCTCGAATGCTACGAAAGCTGAAAAGTCCAGTGAGTA
ACGTGGGAAAGGATTTGGAAGAAGAAGATGTGAAGAAACGTTTTGCCCTC
ATGGTTCTGTCGCTATGTAAAGGACGTAACAAGGTATTCAGTCGAATATT
TCCTCAACTGTATCAATTCTTTATTATTGGGTCAGGATCTTGGGGGATTC
TTGTCGGCGATTTATACTTCATGGACTCTTTTTTGGCCATTGTTTTGCCC
AGTATGGTTGGCTCTTTTACAGTTCTTGGTGCGGGCGTCTTGAAATCCCA
TGAAGTTGTAGGAATATTTGTGATAATTATCGGCTATGGTGTATTGGTCT
ACGCTGCTGCAATTGGCTGGTTGGGCACTTCTCAACCTCAGGTATTTGCT
GTTGCCCAATACATTGAATGGGGTACCGTTTTATTCACTCTGGCAGATAC
ATTCTTCGACTACCTGAAAAGCCTTATCACATGGGATAGCGACATCTTTA
GCATTGCTCACTCAATATCGAAAGGGTGTGAGACCAGGAGGCAAGAAGAG
CGTCGTATTGAAATGGAGAGCATAGCCTTCCCAAGCGAACCTATGGAAAA
CCCTCGTACAAGACATCGCTATTGGGACATATCTGTAAGAAGAGTTTTTG
TAGATCTGGTTTTATTCGCTACAAATTGCACGACCACTGTGATTTTATTA
CAGAATGTTGGTTCACCGTTCCAAGCGGCTCGTCTTGTGAGTTTGGAGAT
GTTGGACATGGCTTCTGTGATTTTGTTGTCTGTGAACGGTGCTCTGGTAG
AACCGACGTTGTTCATTAAGTTGCTAAAGCTGGCGCGAGAAACTTCCGAA
GTTGATGATGATAAGAAAACTGAACGTGAAGGAGAGTCTGGGCTTATGCA
GCCTTCGAAAGAGGGCAAGCTGGAGCGTCTTTAG
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