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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703578.1 |
| PFAMs | Oxysterol_BP,PH |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K20456 |
| Evalue | 3.25e-136 |
| EggNOG OGs | KOG1737@1|root,KOG1737@2759|Eukaryota |
| Description | lipid transport |
| COG category | O |
| BRITE | ko00000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3383.t1.start1 | Ggra3383.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000189_pilon 179642..179644 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3383.t1.stop1 | Ggra3383.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000189_pilon 182168..182170 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra3383.t1 ID=Ggra3383.t1|Name=Ggra3383.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=843bp MPHMPHIPHIPHMPRMKRILHRRRSSAGNTDAHVTLSLHKDDFHNLTATD PGVPPQKTGTLLKFTNVIKGWKPRTFSLENGRLVYSSADSDEGDSPASSS RNLLEKERSKKKRSKLRKFKRAFSREEKDRDFKGSINLQTAVITADESDI CRFAIDVGHDVYHCKAETREERDDWVQVLNASNAYFRGLIQRAISRSQQQ VSPPESPKGKFLQKLSGKTLNSVSPSLKPVSTSQTIPQISDDSEESVLED DGLKEAEESRRALMNELQRVLGVWRKELLCSESLALGSEELLRILAYTFR DLGTNDQSIAGDHIRETTKGLIDLTSWCLNVLQTNDEMFDRRLKADLTRL MANQLPVFPQHVVPQAPEDRQKILDDSSDDEFVDALSRVASLRSSARLSG MLAASYVPAPEPSLKAIQEEQILEQSEIGERMRAVQRIDTEILSLSVKGE RASLPPLPPNREKPNVLTLLKDSVGKDLSRISFPVSLNEPLSFVQRLAED IEYCELLDKGAKDPDPNRRLMYVATMVISHYSSTLGRIAKPFNPLLGETA CVIRPKKGQGVRYVAEQVSHHPPISASYAEGSGASWKYYNAIEVRHKFWG KSLEIIPTGLNHVEFPETGDHYVFNQITTCVHNIVIGRMWLDNYGEMEIV NRTNGGRCIIDFSKTGWMSDSNSFGGITGTIFDAEGVPKIKIKGNWTKSV YEDLGRRKRNVLWQAVERPPETLSQSYNMTKWAITLNAPVHDDERKVIAP TDSRLRPDQRALENGKYEEAANLKSALEESQRNRRRQLDEAGVQWEPRWF RKVVDEETGSTDYRYGGEYFERHSKGDWGDCTDIFAIDDAGP* back to topspliced messenger RNA >Ggra3383.t1 ID=Ggra3383.t1|Name=Ggra3383.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2529bp|location=Sequence derived from alignment at tig00000189_pilon:179642..182170+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGCACATGCCTCACATCCCCCACATCCCCCACATGCCGCGAATGAA ACGCATCCTGCACCGCCGTCGTTCCTCGGCAGGCAACACCGACGCCCATG TTACCTTGTCTCTTCACAAGGATGACTTCCATAACCTGACTGCCACCGAT CCGGGCGTGCCGCCGCAGAAGACTGGCACCTTGCTCAAGTTCACCAACGT CATTAAGGGCTGGAAACCGCGCACCTTCTCGCTCGAAAACGGCCGCCTTG TATACTCTTCCGCTGACAGCGACGAAGGCGATTCTCCAGCCTCTTCCTCC CGAAACTTGCTTGAGAAGGAGCGTTCCAAGAAAAAGCGTTCCAAGCTGCG AAAATTCAAGCGTGCTTTTAGTCGCGAAGAGAAGGACCGCGATTTCAAGG GTTCTATCAATTTGCAAACCGCCGTCATAACTGCCGACGAATCCGACATC TGTCGCTTTGCAATCGACGTCGGACATGATGTGTACCACTGCAAGGCCGA AACTAGAGAAGAACGCGATGATTGGGTCCAGGTTTTAAACGCTTCCAACG CATACTTCCGCGGCCTTATTCAAAGAGCTATTTCTCGTTCTCAGCAGCAA GTCAGCCCCCCCGAAAGCCCTAAAGGAAAGTTTCTGCAGAAACTCTCTGG AAAAACGCTGAATTCTGTTTCTCCGTCATTGAAACCTGTCTCCACATCGC AAACAATCCCTCAAATATCCGACGACAGCGAGGAGTCAGTTCTAGAAGAT GACGGTCTAAAAGAGGCCGAAGAGAGCCGTCGAGCGCTAATGAACGAACT GCAGCGCGTGCTTGGCGTTTGGAGAAAGGAACTGCTTTGCTCTGAATCCC TGGCTTTAGGTAGTGAGGAACTTCTGAGAATCTTGGCTTATACATTTAGG GACCTTGGTACTAACGACCAGAGCATCGCTGGTGATCACATCAGAGAAAC CACAAAGGGCCTGATCGATCTCACCTCGTGGTGTCTGAATGTCTTGCAAA CAAACGATGAAATGTTTGATAGACGTCTCAAAGCAGATCTTACCCGTCTT ATGGCCAACCAGCTTCCAGTTTTCCCGCAACACGTTGTACCGCAAGCGCC TGAGGATAGGCAGAAAATTTTGGACGACTCTAGCGATGATGAGTTTGTTG ATGCTCTGTCACGAGTTGCAAGTCTGCGTAGCTCGGCCAGACTATCTGGA ATGCTTGCGGCCTCGTATGTACCTGCTCCAGAACCTTCGCTCAAAGCAAT TCAAGAAGAACAAATCCTGGAGCAAAGTGAGATCGGCGAACGGATGAGAG CAGTCCAGCGCATTGACACAGAAATACTTTCTTTATCGGTGAAAGGGGAG CGAGCATCTTTACCGCCACTTCCACCAAATAGGGAAAAACCGAATGTGCT AACCCTCTTGAAAGATTCTGTCGGAAAAGACTTGTCTCGTATCAGTTTTC CTGTCAGTCTCAACGAACCTCTTTCGTTTGTACAGCGTCTAGCGGAAGAT ATTGAGTATTGTGAGTTGCTCGACAAAGGCGCGAAAGACCCTGACCCAAA CCGAAGATTGATGTACGTTGCGACCATGGTAATATCCCACTACAGTTCCA CCCTAGGACGGATTGCGAAGCCATTCAACCCTTTGCTAGGGGAAACTGCT TGTGTTATTCGCCCAAAGAAGGGCCAAGGTGTACGGTATGTCGCCGAACA AGTGAGTCATCATCCTCCTATTTCAGCCAGTTATGCGGAAGGCTCAGGCG CGTCATGGAAGTACTACAACGCGATTGAAGTGAGACACAAATTTTGGGGT AAGAGCTTGGAAATCATTCCTACAGGCTTGAACCATGTGGAGTTTCCCGA AACCGGAGACCACTATGTGTTTAACCAAATCACTACATGTGTACACAACA TCGTTATTGGAAGAATGTGGCTCGATAATTATGGAGAAATGGAAATCGTC AACCGAACAAACGGTGGACGATGTATTATCGATTTTAGCAAAACAGGGTG GATGAGCGATTCTAACTCATTCGGGGGGATAACCGGTACGATCTTTGACG CTGAAGGGGTTCCAAAGATCAAGATTAAAGGCAACTGGACAAAGAGCGTG TACGAGGACTTGGGTCGGCGGAAACGAAACGTCTTGTGGCAAGCGGTGGA GCGACCACCAGAAACCTTGTCGCAATCGTACAACATGACAAAGTGGGCCA TTACGCTCAATGCCCCTGTTCATGACGATGAAAGAAAGGTTATCGCTCCG ACAGATAGCAGGTTGCGGCCTGACCAAAGAGCTCTTGAGAATGGCAAGTA TGAAGAAGCAGCCAACCTCAAGAGCGCTCTTGAGGAGTCTCAGCGAAACC GTCGCCGACAATTGGATGAAGCTGGTGTACAATGGGAACCTCGGTGGTTC CGGAAGGTGGTGGATGAAGAGACGGGCTCCACAGATTACAGATACGGGGG GGAGTATTTCGAGAGACACTCCAAAGGGGATTGGGGTGACTGCACTGACA TCTTTGCGATAGACGACGCTGGGCCTTAG back to topprotein sequence of Ggra3383.t1 >Ggra3383.t1 ID=Ggra3383.t1|Name=Ggra3383.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=843bp
MPHMPHIPHIPHMPRMKRILHRRRSSAGNTDAHVTLSLHKDDFHNLTATD PGVPPQKTGTLLKFTNVIKGWKPRTFSLENGRLVYSSADSDEGDSPASSS RNLLEKERSKKKRSKLRKFKRAFSREEKDRDFKGSINLQTAVITADESDI CRFAIDVGHDVYHCKAETREERDDWVQVLNASNAYFRGLIQRAISRSQQQ VSPPESPKGKFLQKLSGKTLNSVSPSLKPVSTSQTIPQISDDSEESVLED DGLKEAEESRRALMNELQRVLGVWRKELLCSESLALGSEELLRILAYTFR DLGTNDQSIAGDHIRETTKGLIDLTSWCLNVLQTNDEMFDRRLKADLTRL MANQLPVFPQHVVPQAPEDRQKILDDSSDDEFVDALSRVASLRSSARLSG MLAASYVPAPEPSLKAIQEEQILEQSEIGERMRAVQRIDTEILSLSVKGE RASLPPLPPNREKPNVLTLLKDSVGKDLSRISFPVSLNEPLSFVQRLAED IEYCELLDKGAKDPDPNRRLMYVATMVISHYSSTLGRIAKPFNPLLGETA CVIRPKKGQGVRYVAEQVSHHPPISASYAEGSGASWKYYNAIEVRHKFWG KSLEIIPTGLNHVEFPETGDHYVFNQITTCVHNIVIGRMWLDNYGEMEIV NRTNGGRCIIDFSKTGWMSDSNSFGGITGTIFDAEGVPKIKIKGNWTKSV YEDLGRRKRNVLWQAVERPPETLSQSYNMTKWAITLNAPVHDDERKVIAP TDSRLRPDQRALENGKYEEAANLKSALEESQRNRRRQLDEAGVQWEPRWF RKVVDEETGSTDYRYGGEYFERHSKGDWGDCTDIFAIDDAGP* back to topmRNA from alignment at tig00000189_pilon:179642..182170+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra3383.t1 ID=Ggra3383.t1|Name=Ggra3383.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2529bp|location=Sequence derived from alignment at tig00000189_pilon:179642..182170+ (Gracilaria gracilis GNS1m male) ATGCCGCACATGCCTCACATCCCCCACATCCCCCACATGCCGCGAATGAA
ACGCATCCTGCACCGCCGTCGTTCCTCGGCAGGCAACACCGACGCCCATG
TTACCTTGTCTCTTCACAAGGATGACTTCCATAACCTGACTGCCACCGAT
CCGGGCGTGCCGCCGCAGAAGACTGGCACCTTGCTCAAGTTCACCAACGT
CATTAAGGGCTGGAAACCGCGCACCTTCTCGCTCGAAAACGGCCGCCTTG
TATACTCTTCCGCTGACAGCGACGAAGGCGATTCTCCAGCCTCTTCCTCC
CGAAACTTGCTTGAGAAGGAGCGTTCCAAGAAAAAGCGTTCCAAGCTGCG
AAAATTCAAGCGTGCTTTTAGTCGCGAAGAGAAGGACCGCGATTTCAAGG
GTTCTATCAATTTGCAAACCGCCGTCATAACTGCCGACGAATCCGACATC
TGTCGCTTTGCAATCGACGTCGGACATGATGTGTACCACTGCAAGGCCGA
AACTAGAGAAGAACGCGATGATTGGGTCCAGGTTTTAAACGCTTCCAACG
CATACTTCCGCGGCCTTATTCAAAGAGCTATTTCTCGTTCTCAGCAGCAA
GTCAGCCCCCCCGAAAGCCCTAAAGGAAAGTTTCTGCAGAAACTCTCTGG
AAAAACGCTGAATTCTGTTTCTCCGTCATTGAAACCTGTCTCCACATCGC
AAACAATCCCTCAAATATCCGACGACAGCGAGGAGTCAGTTCTAGAAGAT
GACGGTCTAAAAGAGGCCGAAGAGAGCCGTCGAGCGCTAATGAACGAACT
GCAGCGCGTGCTTGGCGTTTGGAGAAAGGAACTGCTTTGCTCTGAATCCC
TGGCTTTAGGTAGTGAGGAACTTCTGAGAATCTTGGCTTATACATTTAGG
GACCTTGGTACTAACGACCAGAGCATCGCTGGTGATCACATCAGAGAAAC
CACAAAGGGCCTGATCGATCTCACCTCGTGGTGTCTGAATGTCTTGCAAA
CAAACGATGAAATGTTTGATAGACGTCTCAAAGCAGATCTTACCCGTCTT
ATGGCCAACCAGCTTCCAGTTTTCCCGCAACACGTTGTACCGCAAGCGCC
TGAGGATAGGCAGAAAATTTTGGACGACTCTAGCGATGATGAGTTTGTTG
ATGCTCTGTCACGAGTTGCAAGTCTGCGTAGCTCGGCCAGACTATCTGGA
ATGCTTGCGGCCTCGTATGTACCTGCTCCAGAACCTTCGCTCAAAGCAAT
TCAAGAAGAACAAATCCTGGAGCAAAGTGAGATCGGCGAACGGATGAGAG
CAGTCCAGCGCATTGACACAGAAATACTTTCTTTATCGGTGAAAGGGGAG
CGAGCATCTTTACCGCCACTTCCACCAAATAGGGAAAAACCGAATGTGCT
AACCCTCTTGAAAGATTCTGTCGGAAAAGACTTGTCTCGTATCAGTTTTC
CTGTCAGTCTCAACGAACCTCTTTCGTTTGTACAGCGTCTAGCGGAAGAT
ATTGAGTATTGTGAGTTGCTCGACAAAGGCGCGAAAGACCCTGACCCAAA
CCGAAGATTGATGTACGTTGCGACCATGGTAATATCCCACTACAGTTCCA
CCCTAGGACGGATTGCGAAGCCATTCAACCCTTTGCTAGGGGAAACTGCT
TGTGTTATTCGCCCAAAGAAGGGCCAAGGTGTACGGTATGTCGCCGAACA
AGTGAGTCATCATCCTCCTATTTCAGCCAGTTATGCGGAAGGCTCAGGCG
CGTCATGGAAGTACTACAACGCGATTGAAGTGAGACACAAATTTTGGGGT
AAGAGCTTGGAAATCATTCCTACAGGCTTGAACCATGTGGAGTTTCCCGA
AACCGGAGACCACTATGTGTTTAACCAAATCACTACATGTGTACACAACA
TCGTTATTGGAAGAATGTGGCTCGATAATTATGGAGAAATGGAAATCGTC
AACCGAACAAACGGTGGACGATGTATTATCGATTTTAGCAAAACAGGGTG
GATGAGCGATTCTAACTCATTCGGGGGGATAACCGGTACGATCTTTGACG
CTGAAGGGGTTCCAAAGATCAAGATTAAAGGCAACTGGACAAAGAGCGTG
TACGAGGACTTGGGTCGGCGGAAACGAAACGTCTTGTGGCAAGCGGTGGA
GCGACCACCAGAAACCTTGTCGCAATCGTACAACATGACAAAGTGGGCCA
TTACGCTCAATGCCCCTGTTCATGACGATGAAAGAAAGGTTATCGCTCCG
ACAGATAGCAGGTTGCGGCCTGACCAAAGAGCTCTTGAGAATGGCAAGTA
TGAAGAAGCAGCCAACCTCAAGAGCGCTCTTGAGGAGTCTCAGCGAAACC
GTCGCCGACAATTGGATGAAGCTGGTGTACAATGGGAACCTCGGTGGTTC
CGGAAGGTGGTGGATGAAGAGACGGGCTCCACAGATTACAGATACGGGGG
GGAGTATTTCGAGAGACACTCCAAAGGGGATTGGGGTGACTGCACTGACA
TCTTTGCGATAGACGACGCTGGGCCTTAG back to topCoding sequence (CDS) from alignment at tig00000189_pilon:179642..182170+ >Ggra3383.t1 ID=Ggra3383.t1|Name=Ggra3383.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2529bp|location=Sequence derived from alignment at tig00000189_pilon:179642..182170+ (Gracilaria gracilis GNS1m male) ATGCCGCACATGCCTCACATCCCCCACATCCCCCACATGCCGCGAATGAA ACGCATCCTGCACCGCCGTCGTTCCTCGGCAGGCAACACCGACGCCCATG TTACCTTGTCTCTTCACAAGGATGACTTCCATAACCTGACTGCCACCGAT CCGGGCGTGCCGCCGCAGAAGACTGGCACCTTGCTCAAGTTCACCAACGT CATTAAGGGCTGGAAACCGCGCACCTTCTCGCTCGAAAACGGCCGCCTTG TATACTCTTCCGCTGACAGCGACGAAGGCGATTCTCCAGCCTCTTCCTCC CGAAACTTGCTTGAGAAGGAGCGTTCCAAGAAAAAGCGTTCCAAGCTGCG AAAATTCAAGCGTGCTTTTAGTCGCGAAGAGAAGGACCGCGATTTCAAGG GTTCTATCAATTTGCAAACCGCCGTCATAACTGCCGACGAATCCGACATC TGTCGCTTTGCAATCGACGTCGGACATGATGTGTACCACTGCAAGGCCGA AACTAGAGAAGAACGCGATGATTGGGTCCAGGTTTTAAACGCTTCCAACG CATACTTCCGCGGCCTTATTCAAAGAGCTATTTCTCGTTCTCAGCAGCAA GTCAGCCCCCCCGAAAGCCCTAAAGGAAAGTTTCTGCAGAAACTCTCTGG AAAAACGCTGAATTCTGTTTCTCCGTCATTGAAACCTGTCTCCACATCGC AAACAATCCCTCAAATATCCGACGACAGCGAGGAGTCAGTTCTAGAAGAT GACGGTCTAAAAGAGGCCGAAGAGAGCCGTCGAGCGCTAATGAACGAACT GCAGCGCGTGCTTGGCGTTTGGAGAAAGGAACTGCTTTGCTCTGAATCCC TGGCTTTAGGTAGTGAGGAACTTCTGAGAATCTTGGCTTATACATTTAGG GACCTTGGTACTAACGACCAGAGCATCGCTGGTGATCACATCAGAGAAAC CACAAAGGGCCTGATCGATCTCACCTCGTGGTGTCTGAATGTCTTGCAAA CAAACGATGAAATGTTTGATAGACGTCTCAAAGCAGATCTTACCCGTCTT ATGGCCAACCAGCTTCCAGTTTTCCCGCAACACGTTGTACCGCAAGCGCC TGAGGATAGGCAGAAAATTTTGGACGACTCTAGCGATGATGAGTTTGTTG ATGCTCTGTCACGAGTTGCAAGTCTGCGTAGCTCGGCCAGACTATCTGGA ATGCTTGCGGCCTCGTATGTACCTGCTCCAGAACCTTCGCTCAAAGCAAT TCAAGAAGAACAAATCCTGGAGCAAAGTGAGATCGGCGAACGGATGAGAG CAGTCCAGCGCATTGACACAGAAATACTTTCTTTATCGGTGAAAGGGGAG CGAGCATCTTTACCGCCACTTCCACCAAATAGGGAAAAACCGAATGTGCT AACCCTCTTGAAAGATTCTGTCGGAAAAGACTTGTCTCGTATCAGTTTTC CTGTCAGTCTCAACGAACCTCTTTCGTTTGTACAGCGTCTAGCGGAAGAT ATTGAGTATTGTGAGTTGCTCGACAAAGGCGCGAAAGACCCTGACCCAAA CCGAAGATTGATGTACGTTGCGACCATGGTAATATCCCACTACAGTTCCA CCCTAGGACGGATTGCGAAGCCATTCAACCCTTTGCTAGGGGAAACTGCT TGTGTTATTCGCCCAAAGAAGGGCCAAGGTGTACGGTATGTCGCCGAACA AGTGAGTCATCATCCTCCTATTTCAGCCAGTTATGCGGAAGGCTCAGGCG CGTCATGGAAGTACTACAACGCGATTGAAGTGAGACACAAATTTTGGGGT AAGAGCTTGGAAATCATTCCTACAGGCTTGAACCATGTGGAGTTTCCCGA AACCGGAGACCACTATGTGTTTAACCAAATCACTACATGTGTACACAACA TCGTTATTGGAAGAATGTGGCTCGATAATTATGGAGAAATGGAAATCGTC AACCGAACAAACGGTGGACGATGTATTATCGATTTTAGCAAAACAGGGTG GATGAGCGATTCTAACTCATTCGGGGGGATAACCGGTACGATCTTTGACG CTGAAGGGGTTCCAAAGATCAAGATTAAAGGCAACTGGACAAAGAGCGTG TACGAGGACTTGGGTCGGCGGAAACGAAACGTCTTGTGGCAAGCGGTGGA GCGACCACCAGAAACCTTGTCGCAATCGTACAACATGACAAAGTGGGCCA TTACGCTCAATGCCCCTGTTCATGACGATGAAAGAAAGGTTATCGCTCCG ACAGATAGCAGGTTGCGGCCTGACCAAAGAGCTCTTGAGAATGGCAAGTA TGAAGAAGCAGCCAACCTCAAGAGCGCTCTTGAGGAGTCTCAGCGAAACC GTCGCCGACAATTGGATGAAGCTGGTGTACAATGGGAACCTCGGTGGTTC CGGAAGGTGGTGGATGAAGAGACGGGCTCCACAGATTACAGATACGGGGG GGAGTATTTCGAGAGACACTCCAAAGGGGATTGGGGTGACTGCACTGACA TCTTTGCGATAGACGACGCTGGGCCTTAG back to top
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