Ggra3357.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3357.t1
Unique NameGgra3357.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length458
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:97036..98409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog946362.XP_004996696.1
Preferred nameGPN1
PFAMsATP_bind_1
Max annot lvl33154|Opisthokonta
KEGG koko:K06883
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006810,GO:0006913,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022607,GO:0031974,GO:0031981,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048285,GO:0051169,GO:0051179,GO:0051234,GO:0051276,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0071840,GO:0098813,GO:0140014,GO:1903047,GO:1990114
Evalue3.33e-89
EggNOG OGsKOG1532@1|root,KOG1532@2759|Eukaryota,38DJQ@33154|Opisthokonta
DescriptionGTPase activity
COG categoryL
BRITEko00000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3357Ggra3357Gracilaria gracilis GNS1m malegenetig00000189_pilon 97036..98409 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3357.t1.stop1Ggra3357.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000189_pilon 97036..97038 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3357.t1.CDS1Ggra3357.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000189_pilon 97036..98409 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3357.t1.exon1Ggra3357.t1.exon1Gracilaria gracilis GNS1m maleexontig00000189_pilon 97036..98409 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3357.t1.start1Ggra3357.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000189_pilon 98407..98409 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3357.t1Ggra3357.t1Gracilaria gracilis GNS1m malepolypeptidetig00000189_pilon 97036..98409 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3357.t1 ID=Ggra3357.t1|Name=Ggra3357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=458bp
MAQNEPHSATPTAASSSGVAAARPSFEHSDGTRIFTPVCLVLGMAGSGKT
TLVDALSAWLEDDDLSQSSQGTEEDAQSKDDADLNDQIVDAMHSLKLQQS
ASVAPERKRAPTPNSQAAAQEVQQVLPGDGAYVINLDPAVYQLPYEPNID
IRDTIKYKEVMSHYSLGPNGAIITSLNLYATRFDQVLTLIEKRAPDSRAV
IIDTPGQIETFTWSASGDIITEILGISLPTVILFVIDTTRCENTMTFVSN
MLYACSIMYKTRLPMIIVFNKTDVKSCDFAQAWMRDFTQLEKNLKENNFL
GTLARSMAQALEEFYNTFRSVGVSAQTGEGMEQLAQCIKDAALEYEQEYR
PYVEERKRARAEEKKLAQDAQIARVRRDLQDEPGFERPPRFEEDDSGADE
EEVEPSPSLFPDQHAVRLAKMKGEFYDEEEEQRKYQEFIQRFNEKSSGSN
NTEPKDT*
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spliced messenger RNA

>Ggra3357.t1 ID=Ggra3357.t1|Name=Ggra3357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1374bp|location=Sequence derived from alignment at tig00000189_pilon:97036..98409- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCAGAACGAGCCGCATTCAGCTACGCCCACCGCGGCGTCCTCGTC
TGGGGTGGCCGCGGCGCGCCCTTCTTTCGAACATAGTGATGGTACCCGCA
TATTCACCCCGGTCTGCCTCGTACTCGGCATGGCCGGCTCGGGCAAGACC
ACTTTGGTCGACGCACTCTCCGCCTGGCTGGAAGACGATGATCTATCGCA
AAGTTCGCAGGGCACAGAGGAAGATGCGCAGTCGAAGGATGACGCCGACC
TGAACGACCAGATTGTCGACGCCATGCACTCGCTCAAACTCCAGCAATCT
GCGTCAGTTGCCCCCGAACGGAAGCGCGCTCCAACTCCAAACTCTCAGGC
GGCGGCTCAAGAGGTTCAACAGGTGCTTCCGGGCGATGGTGCATATGTCA
TTAATTTGGATCCGGCTGTTTATCAACTACCATACGAACCCAATATTGAC
ATTCGCGATACCATCAAGTACAAAGAGGTTATGAGTCACTACTCTTTGGG
ACCTAATGGTGCTATCATTACGTCTCTCAATCTGTATGCTACCCGTTTCG
ATCAGGTTCTCACTTTGATCGAAAAGCGCGCCCCTGACAGCCGTGCTGTC
ATAATTGATACTCCAGGCCAGATCGAGACATTCACTTGGTCCGCATCTGG
AGACATTATTACCGAGATATTGGGTATCTCGCTCCCGACCGTCATTCTCT
TCGTCATTGACACCACCAGATGTGAGAATACGATGACCTTTGTTAGCAAT
ATGTTGTACGCCTGCTCTATCATGTATAAAACCCGACTGCCCATGATCAT
TGTCTTCAACAAAACTGACGTCAAGAGCTGCGATTTCGCTCAGGCTTGGA
TGCGCGATTTTACACAGCTGGAGAAAAACTTGAAAGAGAACAACTTCTTG
GGCACACTAGCCAGAAGTATGGCACAAGCTCTAGAGGAATTCTACAACAC
TTTTCGCAGCGTTGGAGTCAGCGCTCAGACTGGGGAAGGTATGGAGCAGT
TAGCCCAATGTATCAAAGATGCAGCATTAGAGTATGAACAAGAGTACAGA
CCATATGTTGAGGAGAGGAAGAGGGCTAGAGCTGAAGAAAAGAAGCTTGC
TCAAGATGCTCAAATTGCGCGCGTGAGAAGAGATTTACAAGATGAACCTG
GCTTTGAAAGACCACCGAGATTCGAAGAAGATGACTCTGGCGCTGATGAA
GAGGAAGTTGAGCCAAGCCCCAGTTTGTTTCCAGATCAGCATGCTGTCCG
ACTTGCAAAAATGAAAGGAGAGTTCTACGACGAGGAAGAAGAACAACGCA
AGTACCAAGAGTTCATTCAGAGATTCAATGAAAAGAGTTCTGGTTCAAAC
AACACTGAACCCAAGGACACCTAG
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protein sequence of Ggra3357.t1

>Ggra3357.t1 ID=Ggra3357.t1|Name=Ggra3357.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=458bp
MAQNEPHSATPTAASSSGVAAARPSFEHSDGTRIFTPVCLVLGMAGSGKT
TLVDALSAWLEDDDLSQSSQGTEEDAQSKDDADLNDQIVDAMHSLKLQQS
ASVAPERKRAPTPNSQAAAQEVQQVLPGDGAYVINLDPAVYQLPYEPNID
IRDTIKYKEVMSHYSLGPNGAIITSLNLYATRFDQVLTLIEKRAPDSRAV
IIDTPGQIETFTWSASGDIITEILGISLPTVILFVIDTTRCENTMTFVSN
MLYACSIMYKTRLPMIIVFNKTDVKSCDFAQAWMRDFTQLEKNLKENNFL
GTLARSMAQALEEFYNTFRSVGVSAQTGEGMEQLAQCIKDAALEYEQEYR
PYVEERKRARAEEKKLAQDAQIARVRRDLQDEPGFERPPRFEEDDSGADE
EEVEPSPSLFPDQHAVRLAKMKGEFYDEEEEQRKYQEFIQRFNEKSSGSN
NTEPKDT*
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mRNA from alignment at tig00000189_pilon:97036..98409-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3357.t1 ID=Ggra3357.t1|Name=Ggra3357.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1374bp|location=Sequence derived from alignment at tig00000189_pilon:97036..98409- (Gracilaria gracilis GNS1m male)
ATGGCGCAGAACGAGCCGCATTCAGCTACGCCCACCGCGGCGTCCTCGTC
TGGGGTGGCCGCGGCGCGCCCTTCTTTCGAACATAGTGATGGTACCCGCA
TATTCACCCCGGTCTGCCTCGTACTCGGCATGGCCGGCTCGGGCAAGACC
ACTTTGGTCGACGCACTCTCCGCCTGGCTGGAAGACGATGATCTATCGCA
AAGTTCGCAGGGCACAGAGGAAGATGCGCAGTCGAAGGATGACGCCGACC
TGAACGACCAGATTGTCGACGCCATGCACTCGCTCAAACTCCAGCAATCT
GCGTCAGTTGCCCCCGAACGGAAGCGCGCTCCAACTCCAAACTCTCAGGC
GGCGGCTCAAGAGGTTCAACAGGTGCTTCCGGGCGATGGTGCATATGTCA
TTAATTTGGATCCGGCTGTTTATCAACTACCATACGAACCCAATATTGAC
ATTCGCGATACCATCAAGTACAAAGAGGTTATGAGTCACTACTCTTTGGG
ACCTAATGGTGCTATCATTACGTCTCTCAATCTGTATGCTACCCGTTTCG
ATCAGGTTCTCACTTTGATCGAAAAGCGCGCCCCTGACAGCCGTGCTGTC
ATAATTGATACTCCAGGCCAGATCGAGACATTCACTTGGTCCGCATCTGG
AGACATTATTACCGAGATATTGGGTATCTCGCTCCCGACCGTCATTCTCT
TCGTCATTGACACCACCAGATGTGAGAATACGATGACCTTTGTTAGCAAT
ATGTTGTACGCCTGCTCTATCATGTATAAAACCCGACTGCCCATGATCAT
TGTCTTCAACAAAACTGACGTCAAGAGCTGCGATTTCGCTCAGGCTTGGA
TGCGCGATTTTACACAGCTGGAGAAAAACTTGAAAGAGAACAACTTCTTG
GGCACACTAGCCAGAAGTATGGCACAAGCTCTAGAGGAATTCTACAACAC
TTTTCGCAGCGTTGGAGTCAGCGCTCAGACTGGGGAAGGTATGGAGCAGT
TAGCCCAATGTATCAAAGATGCAGCATTAGAGTATGAACAAGAGTACAGA
CCATATGTTGAGGAGAGGAAGAGGGCTAGAGCTGAAGAAAAGAAGCTTGC
TCAAGATGCTCAAATTGCGCGCGTGAGAAGAGATTTACAAGATGAACCTG
GCTTTGAAAGACCACCGAGATTCGAAGAAGATGACTCTGGCGCTGATGAA
GAGGAAGTTGAGCCAAGCCCCAGTTTGTTTCCAGATCAGCATGCTGTCCG
ACTTGCAAAAATGAAAGGAGAGTTCTACGACGAGGAAGAAGAACAACGCA
AGTACCAAGAGTTCATTCAGAGATTCAATGAAAAGAGTTCTGGTTCAAAC
AACACTGAACCCAAGGACACCTAG
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Coding sequence (CDS) from alignment at tig00000189_pilon:97036..98409-

>Ggra3357.t1 ID=Ggra3357.t1|Name=Ggra3357.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1374bp|location=Sequence derived from alignment at tig00000189_pilon:97036..98409- (Gracilaria gracilis GNS1m male)
ATGGCGCAGAACGAGCCGCATTCAGCTACGCCCACCGCGGCGTCCTCGTC
TGGGGTGGCCGCGGCGCGCCCTTCTTTCGAACATAGTGATGGTACCCGCA
TATTCACCCCGGTCTGCCTCGTACTCGGCATGGCCGGCTCGGGCAAGACC
ACTTTGGTCGACGCACTCTCCGCCTGGCTGGAAGACGATGATCTATCGCA
AAGTTCGCAGGGCACAGAGGAAGATGCGCAGTCGAAGGATGACGCCGACC
TGAACGACCAGATTGTCGACGCCATGCACTCGCTCAAACTCCAGCAATCT
GCGTCAGTTGCCCCCGAACGGAAGCGCGCTCCAACTCCAAACTCTCAGGC
GGCGGCTCAAGAGGTTCAACAGGTGCTTCCGGGCGATGGTGCATATGTCA
TTAATTTGGATCCGGCTGTTTATCAACTACCATACGAACCCAATATTGAC
ATTCGCGATACCATCAAGTACAAAGAGGTTATGAGTCACTACTCTTTGGG
ACCTAATGGTGCTATCATTACGTCTCTCAATCTGTATGCTACCCGTTTCG
ATCAGGTTCTCACTTTGATCGAAAAGCGCGCCCCTGACAGCCGTGCTGTC
ATAATTGATACTCCAGGCCAGATCGAGACATTCACTTGGTCCGCATCTGG
AGACATTATTACCGAGATATTGGGTATCTCGCTCCCGACCGTCATTCTCT
TCGTCATTGACACCACCAGATGTGAGAATACGATGACCTTTGTTAGCAAT
ATGTTGTACGCCTGCTCTATCATGTATAAAACCCGACTGCCCATGATCAT
TGTCTTCAACAAAACTGACGTCAAGAGCTGCGATTTCGCTCAGGCTTGGA
TGCGCGATTTTACACAGCTGGAGAAAAACTTGAAAGAGAACAACTTCTTG
GGCACACTAGCCAGAAGTATGGCACAAGCTCTAGAGGAATTCTACAACAC
TTTTCGCAGCGTTGGAGTCAGCGCTCAGACTGGGGAAGGTATGGAGCAGT
TAGCCCAATGTATCAAAGATGCAGCATTAGAGTATGAACAAGAGTACAGA
CCATATGTTGAGGAGAGGAAGAGGGCTAGAGCTGAAGAAAAGAAGCTTGC
TCAAGATGCTCAAATTGCGCGCGTGAGAAGAGATTTACAAGATGAACCTG
GCTTTGAAAGACCACCGAGATTCGAAGAAGATGACTCTGGCGCTGATGAA
GAGGAAGTTGAGCCAAGCCCCAGTTTGTTTCCAGATCAGCATGCTGTCCG
ACTTGCAAAAATGAAAGGAGAGTTCTACGACGAGGAAGAAGAACAACGCA
AGTACCAAGAGTTCATTCAGAGATTCAATGAAAAGAGTTCTGGTTCAAAC
AACACTGAACCCAAGGACACCTAG
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