Ggra333.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra333.t1
Unique NameGgra333.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000209_piloncontigtig00000209_pilon:155693..156340 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra333Ggra333Gracilaria gracilis GNS1m malegenetig00000209_pilon 155693..156340 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra333.t1.start1Ggra333.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000209_pilon 155693..155695 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra333.t1.CDS1Ggra333.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000209_pilon 155693..156340 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra333.t1.exon1Ggra333.t1.exon1Gracilaria gracilis GNS1m maleexontig00000209_pilon 155693..156340 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra333.t1.stop1Ggra333.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000209_pilon 156338..156340 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra333.t1Ggra333.t1Gracilaria gracilis GNS1m malepolypeptidetig00000209_pilon 155693..156340 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra333.t1 ID=Ggra333.t1|Name=Ggra333.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=216bp
MSRRTSRPEFVLFPGAVTKRIQILVDKNELAEDDQACTASSVAKAWKAAY
DGLLYGFGYGMVVHGMSPSDYSRINEYLETDNTIGDVVSNLYTKHVPQAM
KEIYLGFDKEAVLVRLSRRKKRCDLFEAWILSQQYILCRILERGLLEYCD
KVEEFKPNEGLRVMSKILCRFKIRIGSLCGMEDYIRVIEESHEDVMVESS
RSSLISKDHVLRKNG*
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spliced messenger RNA

>Ggra333.t1 ID=Ggra333.t1|Name=Ggra333.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=648bp|location=Sequence derived from alignment at tig00000209_pilon:155693..156340+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTAGGCGCACTTCGAGGCCCGAGTTTGTTCTGTTTCCAGGAGCGGT
TACGAAACGCATACAAATTCTAGTGGACAAGAATGAACTCGCAGAAGATG
ATCAAGCTTGTACGGCCTCGAGTGTGGCGAAGGCGTGGAAGGCTGCTTAT
GATGGGCTACTGTATGGATTTGGATACGGAATGGTCGTGCATGGGATGTC
ACCAAGTGATTATTCACGCATTAATGAATATTTGGAAACAGATAACACAA
TCGGGGACGTTGTGTCTAACTTATACACAAAACATGTGCCACAAGCGATG
AAAGAAATTTACTTAGGATTTGATAAAGAAGCGGTCTTGGTTAGGTTAAG
TCGAAGGAAGAAACGCTGTGATCTCTTTGAGGCATGGATTTTGTCGCAGC
AATACATTCTTTGTCGCATTCTTGAAAGGGGGCTCTTGGAGTATTGCGAT
AAAGTGGAAGAGTTCAAGCCTAATGAAGGCCTGAGGGTTATGAGCAAGAT
TCTATGCCGCTTCAAGATAAGAATTGGGAGCCTATGCGGAATGGAAGACT
ACATCAGAGTTATTGAAGAAAGCCATGAAGACGTGATGGTGGAGAGTTCG
AGGAGTTCTCTGATATCGAAGGACCATGTTCTACGGAAGAATGGTTAG
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protein sequence of Ggra333.t1

>Ggra333.t1 ID=Ggra333.t1|Name=Ggra333.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MSRRTSRPEFVLFPGAVTKRIQILVDKNELAEDDQACTASSVAKAWKAAY
DGLLYGFGYGMVVHGMSPSDYSRINEYLETDNTIGDVVSNLYTKHVPQAM
KEIYLGFDKEAVLVRLSRRKKRCDLFEAWILSQQYILCRILERGLLEYCD
KVEEFKPNEGLRVMSKILCRFKIRIGSLCGMEDYIRVIEESHEDVMVESS
RSSLISKDHVLRKNG*
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mRNA from alignment at tig00000209_pilon:155693..156340+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra333.t1 ID=Ggra333.t1|Name=Ggra333.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=648bp|location=Sequence derived from alignment at tig00000209_pilon:155693..156340+ (Gracilaria gracilis GNS1m male)
ATGAGTAGGCGCACTTCGAGGCCCGAGTTTGTTCTGTTTCCAGGAGCGGT
TACGAAACGCATACAAATTCTAGTGGACAAGAATGAACTCGCAGAAGATG
ATCAAGCTTGTACGGCCTCGAGTGTGGCGAAGGCGTGGAAGGCTGCTTAT
GATGGGCTACTGTATGGATTTGGATACGGAATGGTCGTGCATGGGATGTC
ACCAAGTGATTATTCACGCATTAATGAATATTTGGAAACAGATAACACAA
TCGGGGACGTTGTGTCTAACTTATACACAAAACATGTGCCACAAGCGATG
AAAGAAATTTACTTAGGATTTGATAAAGAAGCGGTCTTGGTTAGGTTAAG
TCGAAGGAAGAAACGCTGTGATCTCTTTGAGGCATGGATTTTGTCGCAGC
AATACATTCTTTGTCGCATTCTTGAAAGGGGGCTCTTGGAGTATTGCGAT
AAAGTGGAAGAGTTCAAGCCTAATGAAGGCCTGAGGGTTATGAGCAAGAT
TCTATGCCGCTTCAAGATAAGAATTGGGAGCCTATGCGGAATGGAAGACT
ACATCAGAGTTATTGAAGAAAGCCATGAAGACGTGATGGTGGAGAGTTCG
AGGAGTTCTCTGATATCGAAGGACCATGTTCTACGGAAGAATGGTTAG
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Coding sequence (CDS) from alignment at tig00000209_pilon:155693..156340+

>Ggra333.t1 ID=Ggra333.t1|Name=Ggra333.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=648bp|location=Sequence derived from alignment at tig00000209_pilon:155693..156340+ (Gracilaria gracilis GNS1m male)
ATGAGTAGGCGCACTTCGAGGCCCGAGTTTGTTCTGTTTCCAGGAGCGGT
TACGAAACGCATACAAATTCTAGTGGACAAGAATGAACTCGCAGAAGATG
ATCAAGCTTGTACGGCCTCGAGTGTGGCGAAGGCGTGGAAGGCTGCTTAT
GATGGGCTACTGTATGGATTTGGATACGGAATGGTCGTGCATGGGATGTC
ACCAAGTGATTATTCACGCATTAATGAATATTTGGAAACAGATAACACAA
TCGGGGACGTTGTGTCTAACTTATACACAAAACATGTGCCACAAGCGATG
AAAGAAATTTACTTAGGATTTGATAAAGAAGCGGTCTTGGTTAGGTTAAG
TCGAAGGAAGAAACGCTGTGATCTCTTTGAGGCATGGATTTTGTCGCAGC
AATACATTCTTTGTCGCATTCTTGAAAGGGGGCTCTTGGAGTATTGCGAT
AAAGTGGAAGAGTTCAAGCCTAATGAAGGCCTGAGGGTTATGAGCAAGAT
TCTATGCCGCTTCAAGATAAGAATTGGGAGCCTATGCGGAATGGAAGACT
ACATCAGAGTTATTGAAGAAAGCCATGAAGACGTGATGGTGGAGAGTTCG
AGGAGTTCTCTGATATCGAAGGACCATGTTCTACGGAAGAATGGTTAG
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