Ggra332.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra332.t1
Unique NameGgra332.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000209_piloncontigtig00000209_pilon:140664..143905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra332Ggra332Gracilaria gracilis GNS1m malegenetig00000209_pilon 140664..143905 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1Ggra332.t1Gracilaria gracilis GNS1m malepolypeptidetig00000209_pilon 140664..143905 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1.start1Ggra332.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000209_pilon 140664..140666 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1.CDS1Ggra332.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000209_pilon 140664..141292 +
Ggra332.t1.CDS2Ggra332.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000209_pilon 143557..143905 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1.exon1Ggra332.t1.exon1Gracilaria gracilis GNS1m maleexontig00000209_pilon 140664..141292 +
Ggra332.t1.exon2Ggra332.t1.exon2Gracilaria gracilis GNS1m maleexontig00000209_pilon 143557..143905 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1.intron1Ggra332.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000209_pilon 141293..143556 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra332.t1.stop1Ggra332.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000209_pilon 143903..143905 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra332.t1 ID=Ggra332.t1|Name=Ggra332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=326bp
MRTLGMREVQKEVEERRLEARVESAEGSRCRYVEECVTFMGYRMEIVRTV
IGRWAEGNEGKCDNDMFVGIGGEEMKNMRIDVELSEEVKLGLRDCREGGR
KRGVGGRGFQCRLIWKLQNELERKLLEGEERWGEGNEKFLEMSISTIRLM
VLSFHGVRVEVGGCGTLGKLELLKRAMSGAASVLGVVEGVDVVMGERKER
GKRKMWKEIGLGHGWIALTLLDVLDDCASLDKAKAMERLCSAVEVRNDVN
GMVVLSVLYARGSVSEIGADMETSRMMLRRAAEQGKQLEIDHWLLVRLWK
GMRDGVDGFEQEVELANEIERYCVK*
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spliced messenger RNA

>Ggra332.t1 ID=Ggra332.t1|Name=Ggra332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000209_pilon:140664..143905+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAACATTGGGTATGCGTGAGGTTCAAAAGGAGGTTGAAGAACGACG
GTTGGAAGCGAGAGTTGAAAGTGCAGAGGGGAGTCGATGTAGGTATGTGG
AGGAATGTGTGACGTTCATGGGGTACCGAATGGAGATTGTACGAACTGTG
ATTGGTCGATGGGCGGAAGGGAATGAGGGAAAGTGCGACAATGATATGTT
TGTTGGGATAGGTGGGGAAGAGATGAAAAATATGAGGATTGATGTGGAGT
TGAGCGAAGAGGTGAAATTGGGTTTGAGGGATTGTAGAGAGGGTGGTAGG
AAGAGAGGTGTAGGAGGTCGTGGGTTTCAGTGTCGGTTAATATGGAAGTT
GCAGAACGAGTTGGAAAGGAAGTTGCTTGAGGGAGAAGAAAGATGGGGAG
AAGGGAACGAAAAGTTTTTGGAGATGAGTATTTCGACCATAAGGCTGATG
GTGCTATCATTCCATGGGGTGAGAGTTGAGGTGGGAGGATGTGGGACGTT
GGGGAAGTTAGAGTTGTTGAAGAGAGCAATGAGTGGTGCTGCATCAGTAT
TGGGTGTAGTAGAGGGGGTGGATGTTGTTATGGGAGAGAGGAAAGAGAGG
GGGAAGAGAAAGATGTGGAAGGAAATAGGTCTGGGCCATGGATGGATAGC
TTTAACCTTGCTGGACGTTTTGGATGATTGTGCGAGTTTAGACAAGGCAA
AAGCAATGGAGAGGCTGTGTAGCGCTGTTGAGGTCAGAAATGATGTGAAC
GGCATGGTGGTTCTGTCCGTGCTGTACGCCAGAGGCAGCGTGAGTGAGAT
CGGAGCTGATATGGAGACGTCGAGGATGATGTTGAGACGCGCCGCCGAAC
AGGGAAAGCAGTTAGAGATAGACCACTGGCTTTTGGTGAGGCTGTGGAAG
GGGATGCGAGACGGGGTAGATGGTTTTGAGCAAGAGGTTGAGTTGGCAAA
CGAGATTGAACGATACTGCGTGAAGTGA
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protein sequence of Ggra332.t1

>Ggra332.t1 ID=Ggra332.t1|Name=Ggra332.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MRTLGMREVQKEVEERRLEARVESAEGSRCRYVEECVTFMGYRMEIVRTV
IGRWAEGNEGKCDNDMFVGIGGEEMKNMRIDVELSEEVKLGLRDCREGGR
KRGVGGRGFQCRLIWKLQNELERKLLEGEERWGEGNEKFLEMSISTIRLM
VLSFHGVRVEVGGCGTLGKLELLKRAMSGAASVLGVVEGVDVVMGERKER
GKRKMWKEIGLGHGWIALTLLDVLDDCASLDKAKAMERLCSAVEVRNDVN
GMVVLSVLYARGSVSEIGADMETSRMMLRRAAEQGKQLEIDHWLLVRLWK
GMRDGVDGFEQEVELANEIERYCVK*
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mRNA from alignment at tig00000209_pilon:140664..143905+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra332.t1 ID=Ggra332.t1|Name=Ggra332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3242bp|location=Sequence derived from alignment at tig00000209_pilon:140664..143905+ (Gracilaria gracilis GNS1m male)
ATGCGAACATTGGGTATGCGTGAGGTTCAAAAGGAGGTTGAAGAACGACG
GTTGGAAGCGAGAGTTGAAAGTGCAGAGGGGAGTCGATGTAGGTATGTGG
AGGAATGTGTGACGTTCATGGGGTACCGAATGGAGATTGTACGAACTGTG
ATTGGTCGATGGGCGGAAGGGAATGAGGGAAAGTGCGACAATGATATGTT
TGTTGGGATAGGTGGGGAAGAGATGAAAAATATGAGGATTGATGTGGAGT
TGAGCGAAGAGGTGAAATTGGGTTTGAGGGATTGTAGAGAGGGTGGTAGG
AAGAGAGGTGTAGGAGGTCGTGGGTTTCAGTGTCGGTTAATATGGAAGTT
GCAGAACGAGTTGGAAAGGAAGTTGCTTGAGGGAGAAGAAAGATGGGGAG
AAGGGAACGAAAAGTTTTTGGAGATGAGTATTTCGACCATAAGGCTGATG
GTGCTATCATTCCATGGGGTGAGAGTTGAGGTGGGAGGATGTGGGACGTT
GGGGAAGTTAGAGTTGTTGAAGAGAGCAATGAGTGGTGCTGCATCAGTAT
TGGGTGTAGTAGAGGGGGTGGATGTTGTTATGGGAGAGAGGAAAGAGAGG
GGGAAGAGAAAGATGTGGAAGGAAATAGGGTTAGGTGTGTGAGAGGGTGT
GATGAATGGAAGAGGATTGAGATATCGACAATGTGTGGACCACAAAGAAT
GGGGATAGGAGGGGAGATGGGTGGTGGGGGTGAAGTATTATTGAAGTTAC
TGAATGTAGACGGTAAGGAGTTCAAGTGTGAATGGTGGCgagatgcgttt
atgagacgttcggaggggatgacagagtggaagactgaggttgggatgag
tggagtaggagtggagcggtgggagataaggagagggcaaggggaagggg
ttatgagggaggtagaaacatgggcaaaaagaaggtaagaagttggagtg
aatgggggccattctggacggagttttgtcaatttaaactggaaaacaag
aagttgttagaacaaccgatttggaatggcatgaagatcgggaattttgt
ggaccaccaaagaaatgtcatttcgagaatagcacatcaaggaccgcagc
ggatgaagaatgtgggatatgatgaagtggatgattggatgatgaaacat
tattgtgataccgtgagggcaggactagagtattaagtagtggatggaag
aaatgaagaaagtgagaagagtgaaaagaagatggaggaggaaaaaggag
ggaagaggggaaggagaagggcagaagaagtggatgttggaatttttgaa
gagttggttcggtatcgagctgctgcactgaacgatgaagacgttgaggg
atttggacggtgtataagaatattatgcacgtcagcaggagagaaaagac
gagtttcggaagggttgagcttactttgtagtcttgttggagcaatgctg
cggggctcggggcatggagtgaaagttagagcgggaagggaaagagaaat
aggggaggtgatacttccggaatgtttgagagtagtgtaaatggtagaaa
gtaatgaaggacatgaggaacaattgctgcaagctctattgacatgtttt
gccgtggacgcgtgtaatcatgaaaagaaggtgatgagaatgatgcaacg
aatgattttgatgaacagtgggacgaaaaggggacaggtttgccattgtt
acttgcgacacggaatgcagtgcttgggtcgttgaaggaagaattccgag
aaagcaagaagaagagaacgcgaatgggtgcgaacgtcattgagcttttt
ataaggcctatagaggattctggagatttagaaaggaagagaagaggcag
agagatgggagtattgaagtggttggGAACAAAGAGAAAGGATGTGTTAA
AGAATCCCGAAATCGAAAGAGCGAGGTTGAGGTATAGAAGAGCGAATGAT
GGGGTAGTAATAGGTATTTATGCCGACGCTCTGATGGACTTGGGTTTGGT
GCTCCAGGatggggcaaaaggaatacctaaggatggaacaagagctatga
agctgttcaaacgcccaatggaagaagggaatgacactggcgcaatgacc
aatcttggtcgtttattccaagacgaggcagatggcgtgccaaagaatgc
agtacgagctaaggagctgtacgaactcgcaatcgaagaaggagatgata
tccatgcaatgtgcagTCTTGGTCGTTTATTGGTAGAGGGCTGCAGAGGG
CGAGCCAAAAAATGCAAGACGAGCTAGGGAGCGTTACGAACGCGCAATTA
AAGAAGAGAATGACACTGCTGCTATGAGTAATCTTGGGCTCTTGGTCGTT
TATTGAAGGAGGGTGCTGACGGCGTGTCaaagaatgcaagacgagcgaag
gagctgttcgaactcgcaatcgaagaaAGGAATGACACCGATGCGATGTA
TAATCTTGTTTTCTTGTTGGAAAAGggtgcagacggcgtgcaagtcaatg
caggacgagttaaaaagctgtacgaacgcgcaattgaagaagggagtcac
atctatgcaatgagcaatcttggttacttgttgcaacagggagcagacgg
cgtgccaaataatgcacgacgagcgaagaaactgtacgaacgctcaatcg
aagAAGGAAACAACACTGATGCGATGTACAACCTTGGTTGTTTATTGGAA
GAGGGTGCTGACGGCGCTCTaaagaatgcaagaggagctaaggagctgtt
cgaacgcgcaatcgaagaagAAGGTAACAAGGGTGCCATGCGCAGGCTCG
CAGAACTTTCACGAAGTAGAGCAGAAGGTGTGCCAGGAGATATACCGCGC
TCTATAGCTTTGTACGAGAGTGTTCTACGAATATACGCTCCAGTCTGGGC
CATGGATGGATAGCTTTAACCTTGCTGGACGTTTTGGATGATTGTGCGAG
TTTAGACAAGGCAAAAGCAATGGAGAGGCTGTGTAGCGCTGTTGAGGTCA
GAAATGATGTGAACGGCATGGTGGTTCTGTCCGTGCTGTACGCCAGAGGC
AGCGTGAGTGAGATCGGAGCTGATATGGAGACGTCGAGGATGATGTTGAG
ACGCGCCGCCGAACAGGGAAAGCAGTTAGAGATAGACCACTGGCTTTTGG
TGAGGCTGTGGAAGGGGATGCGAGACGGGGTAGATGGTTTTGAGCAAGAG
GTTGAGTTGGCAAACGAGATTGAACGATACTGCGTGAAGTGA
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Coding sequence (CDS) from alignment at tig00000209_pilon:140664..143905+

>Ggra332.t1 ID=Ggra332.t1|Name=Ggra332.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=978bp|location=Sequence derived from alignment at tig00000209_pilon:140664..143905+ (Gracilaria gracilis GNS1m male)
ATGCGAACATTGGGTATGCGTGAGGTTCAAAAGGAGGTTGAAGAACGACG
GTTGGAAGCGAGAGTTGAAAGTGCAGAGGGGAGTCGATGTAGGTATGTGG
AGGAATGTGTGACGTTCATGGGGTACCGAATGGAGATTGTACGAACTGTG
ATTGGTCGATGGGCGGAAGGGAATGAGGGAAAGTGCGACAATGATATGTT
TGTTGGGATAGGTGGGGAAGAGATGAAAAATATGAGGATTGATGTGGAGT
TGAGCGAAGAGGTGAAATTGGGTTTGAGGGATTGTAGAGAGGGTGGTAGG
AAGAGAGGTGTAGGAGGTCGTGGGTTTCAGTGTCGGTTAATATGGAAGTT
GCAGAACGAGTTGGAAAGGAAGTTGCTTGAGGGAGAAGAAAGATGGGGAG
AAGGGAACGAAAAGTTTTTGGAGATGAGTATTTCGACCATAAGGCTGATG
GTGCTATCATTCCATGGGGTGAGAGTTGAGGTGGGAGGATGTGGGACGTT
GGGGAAGTTAGAGTTGTTGAAGAGAGCAATGAGTGGTGCTGCATCAGTAT
TGGGTGTAGTAGAGGGGGTGGATGTTGTTATGGGAGAGAGGAAAGAGAGG
GGGAAGAGAAAGATGTGGAAGGAAATAGGTCTGGGCCATGGATGGATAGC
TTTAACCTTGCTGGACGTTTTGGATGATTGTGCGAGTTTAGACAAGGCAA
AAGCAATGGAGAGGCTGTGTAGCGCTGTTGAGGTCAGAAATGATGTGAAC
GGCATGGTGGTTCTGTCCGTGCTGTACGCCAGAGGCAGCGTGAGTGAGAT
CGGAGCTGATATGGAGACGTCGAGGATGATGTTGAGACGCGCCGCCGAAC
AGGGAAAGCAGTTAGAGATAGACCACTGGCTTTTGGTGAGGCTGTGGAAG
GGGATGCGAGACGGGGTAGATGGTTTTGAGCAAGAGGTTGAGTTGGCAAA
CGAGATTGAACGATACTGCGTGAAGTGA
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