Ggra3262.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3262.t1
Unique NameGgra3262.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:73789..74214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3262Ggra3262Gracilaria gracilis GNS1m malegenetig00000851_pilon 73789..74214 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3262.t1.start1Ggra3262.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000851_pilon 73789..73791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3262.t1.CDS1Ggra3262.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000851_pilon 73789..74214 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3262.t1.exon1Ggra3262.t1.exon1Gracilaria gracilis GNS1m maleexontig00000851_pilon 73789..74214 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3262.t1.stop1Ggra3262.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000851_pilon 74212..74214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3262.t1Ggra3262.t1Gracilaria gracilis GNS1m malepolypeptidetig00000851_pilon 73789..74214 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3262.t1 ID=Ggra3262.t1|Name=Ggra3262.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=142bp
MEPVVDDELMMVDSSGVKAQSLQKKRKRTGLTVTMTKSLIKNMDTKTLIA
ELDRRAMKKNYMRVEVVALDTEAENDAEDNDDKEREGSAFLDDVDLRAFT
IPVSSVFPGVTVKNAHYGEEDVIWVGFDEILPSVLPESDDP*
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spliced messenger RNA

>Ggra3262.t1 ID=Ggra3262.t1|Name=Ggra3262.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp|location=Sequence derived from alignment at tig00000851_pilon:73789..74214+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAACCTGTTGTGGATGACGAACTGATGATGGTAGATTCATCCGGTGT
AAAGGCCCAAAGTCTTCAAAAGAAGAGGAAACGGACGGGTTTAACTGTGA
CTATGACAAAATCTCTAATAAAGAACATGGACACCAAGACGCTCATTGCG
GAGCTTGACAGAAGAGCTATGAAGAAAAATTATATGAGAGTAGAAGTTGT
TGCTCTTGATACGGAAGCAGAAAATGATGCGGAAGATAACGATGATAAAG
AAAGAGAGGGTTCAGCGTTTTTAGATGACGTGGACCTACGCGCTTTCACA
ATTCCGGTGTCCTCGGTATTCCCAGGCGTAACTGTAAAAAACGCCCATTA
TGGAGAGGAAGACGTGATTTGGGTCGGGTTTGACGAGATATTACCTTCCG
TGCTCCCCGAATCCGATGATCCATAG
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protein sequence of Ggra3262.t1

>Ggra3262.t1 ID=Ggra3262.t1|Name=Ggra3262.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MEPVVDDELMMVDSSGVKAQSLQKKRKRTGLTVTMTKSLIKNMDTKTLIA
ELDRRAMKKNYMRVEVVALDTEAENDAEDNDDKEREGSAFLDDVDLRAFT
IPVSSVFPGVTVKNAHYGEEDVIWVGFDEILPSVLPESDDP*
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mRNA from alignment at tig00000851_pilon:73789..74214+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3262.t1 ID=Ggra3262.t1|Name=Ggra3262.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp|location=Sequence derived from alignment at tig00000851_pilon:73789..74214+ (Gracilaria gracilis GNS1m male)
ATGGAACCTGTTGTGGATGACGAACTGATGATGGTAGATTCATCCGGTGT
AAAGGCCCAAAGTCTTCAAAAGAAGAGGAAACGGACGGGTTTAACTGTGA
CTATGACAAAATCTCTAATAAAGAACATGGACACCAAGACGCTCATTGCG
GAGCTTGACAGAAGAGCTATGAAGAAAAATTATATGAGAGTAGAAGTTGT
TGCTCTTGATACGGAAGCAGAAAATGATGCGGAAGATAACGATGATAAAG
AAAGAGAGGGTTCAGCGTTTTTAGATGACGTGGACCTACGCGCTTTCACA
ATTCCGGTGTCCTCGGTATTCCCAGGCGTAACTGTAAAAAACGCCCATTA
TGGAGAGGAAGACGTGATTTGGGTCGGGTTTGACGAGATATTACCTTCCG
TGCTCCCCGAATCCGATGATCCATAG
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Coding sequence (CDS) from alignment at tig00000851_pilon:73789..74214+

>Ggra3262.t1 ID=Ggra3262.t1|Name=Ggra3262.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=426bp|location=Sequence derived from alignment at tig00000851_pilon:73789..74214+ (Gracilaria gracilis GNS1m male)
ATGGAACCTGTTGTGGATGACGAACTGATGATGGTAGATTCATCCGGTGT
AAAGGCCCAAAGTCTTCAAAAGAAGAGGAAACGGACGGGTTTAACTGTGA
CTATGACAAAATCTCTAATAAAGAACATGGACACCAAGACGCTCATTGCG
GAGCTTGACAGAAGAGCTATGAAGAAAAATTATATGAGAGTAGAAGTTGT
TGCTCTTGATACGGAAGCAGAAAATGATGCGGAAGATAACGATGATAAAG
AAAGAGAGGGTTCAGCGTTTTTAGATGACGTGGACCTACGCGCTTTCACA
ATTCCGGTGTCCTCGGTATTCCCAGGCGTAACTGTAAAAAACGCCCATTA
TGGAGAGGAAGACGTGATTTGGGTCGGGTTTGACGAGATATTACCTTCCG
TGCTCCCCGAATCCGATGATCCATAG
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