Ggra3239.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3239.t1
Unique NameGgra3239.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:155125..155706 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3239Ggra3239Gracilaria gracilis GNS1m malegenetig00000922_pilon 155125..155706 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3239.t1.start1Ggra3239.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000922_pilon 155125..155127 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3239.t1.CDS1Ggra3239.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000922_pilon 155125..155706 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3239.t1.exon1Ggra3239.t1.exon1Gracilaria gracilis GNS1m maleexontig00000922_pilon 155125..155706 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3239.t1.stop1Ggra3239.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000922_pilon 155704..155706 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3239.t1Ggra3239.t1Gracilaria gracilis GNS1m malepolypeptidetig00000922_pilon 155125..155706 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3239.t1 ID=Ggra3239.t1|Name=Ggra3239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=194bp
MVQRVLHVLDPRQPLCQRAALLTLPGGAAWRAGELGALALGADGAMGVTV
GSGGVALWDARGRWSAAPFGWPARWHDRAHRRLNALHVGRAALLAAGGAR
ELLLFARSGAYDGVVPDSYVRRAPVTYVDRVNGCLLVADDAGALRRAHAA
DGVVDWHAARRVLDDECAPTHSLWRRAPPPPPQPRAPYPPFRR*
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spliced messenger RNA

>Ggra3239.t1 ID=Ggra3239.t1|Name=Ggra3239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000922_pilon:155125..155706+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTACAGCGCGTGCTGCACGTGTTGGACCCGCGCCAGCCGCTGTGCCA
GCGCGCGGCGCTGCTGACGCTGCCGGGCGGCGCGGCGTGGCGCGCGGGCG
AGCTGGGCGCGCTGGCGCTGGGCGCGGACGGCGCCATGGGCGTCACGGTG
GGCTCCGGCGGCGTGGCGCTGTGGGACGCGCGCGGCCGCTGGAGCGCCGC
GCCCTTCGGCTGGCCGGCGCGCTGGCACGACCGCGCGCACCGCCGCCTCA
ACGCGCTGCACGTCGGGCGCGCCGCGCTGCTGGCGGCCGGCGGCGCGCGT
GAGCTGCTGCTGTTCGCGCGCTCCGGCGCGTACGACGGCGTCGTGCCGGA
CTCGTACGTGCGCCGCGCGCCCGTCACGTACGTCGACCGCGTCAACGGCT
GTCTGCTCGTCGCCGACGACGCCGGCGCGCTGCGTCGCGCTCACGCCGCC
GACGGCGTTGTCGACTGGCACGCGGCGCGCCGCGTGCTGGACGACGAGTG
CGCGCCCACTCACTCGTTGTGGcgccgcgcgccgccgccgccgccgcagc
cgcgcgctccgtacccgccgTTTCGGCGCTGA
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protein sequence of Ggra3239.t1

>Ggra3239.t1 ID=Ggra3239.t1|Name=Ggra3239.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MVQRVLHVLDPRQPLCQRAALLTLPGGAAWRAGELGALALGADGAMGVTV
GSGGVALWDARGRWSAAPFGWPARWHDRAHRRLNALHVGRAALLAAGGAR
ELLLFARSGAYDGVVPDSYVRRAPVTYVDRVNGCLLVADDAGALRRAHAA
DGVVDWHAARRVLDDECAPTHSLWRRAPPPPPQPRAPYPPFRR*
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mRNA from alignment at tig00000922_pilon:155125..155706+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3239.t1 ID=Ggra3239.t1|Name=Ggra3239.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000922_pilon:155125..155706+ (Gracilaria gracilis GNS1m male)
ATGGTACAGCGCGTGCTGCACGTGTTGGACCCGCGCCAGCCGCTGTGCCA
GCGCGCGGCGCTGCTGACGCTGCCGGGCGGCGCGGCGTGGCGCGCGGGCG
AGCTGGGCGCGCTGGCGCTGGGCGCGGACGGCGCCATGGGCGTCACGGTG
GGCTCCGGCGGCGTGGCGCTGTGGGACGCGCGCGGCCGCTGGAGCGCCGC
GCCCTTCGGCTGGCCGGCGCGCTGGCACGACCGCGCGCACCGCCGCCTCA
ACGCGCTGCACGTCGGGCGCGCCGCGCTGCTGGCGGCCGGCGGCGCGCGT
GAGCTGCTGCTGTTCGCGCGCTCCGGCGCGTACGACGGCGTCGTGCCGGA
CTCGTACGTGCGCCGCGCGCCCGTCACGTACGTCGACCGCGTCAACGGCT
GTCTGCTCGTCGCCGACGACGCCGGCGCGCTGCGTCGCGCTCACGCCGCC
GACGGCGTTGTCGACTGGCACGCGGCGCGCCGCGTGCTGGACGACGAGTG
CGCGCCCACTCACTCGTTGTGGcgccgcgcgccgccgccgccgccgcagc
cgcgcgctccgtacccgccgTTTCGGCGCTGA
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Coding sequence (CDS) from alignment at tig00000922_pilon:155125..155706+

>Ggra3239.t1 ID=Ggra3239.t1|Name=Ggra3239.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=582bp|location=Sequence derived from alignment at tig00000922_pilon:155125..155706+ (Gracilaria gracilis GNS1m male)
ATGGTACAGCGCGTGCTGCACGTGTTGGACCCGCGCCAGCCGCTGTGCCA
GCGCGCGGCGCTGCTGACGCTGCCGGGCGGCGCGGCGTGGCGCGCGGGCG
AGCTGGGCGCGCTGGCGCTGGGCGCGGACGGCGCCATGGGCGTCACGGTG
GGCTCCGGCGGCGTGGCGCTGTGGGACGCGCGCGGCCGCTGGAGCGCCGC
GCCCTTCGGCTGGCCGGCGCGCTGGCACGACCGCGCGCACCGCCGCCTCA
ACGCGCTGCACGTCGGGCGCGCCGCGCTGCTGGCGGCCGGCGGCGCGCGT
GAGCTGCTGCTGTTCGCGCGCTCCGGCGCGTACGACGGCGTCGTGCCGGA
CTCGTACGTGCGCCGCGCGCCCGTCACGTACGTCGACCGCGTCAACGGCT
GTCTGCTCGTCGCCGACGACGCCGGCGCGCTGCGTCGCGCTCACGCCGCC
GACGGCGTTGTCGACTGGCACGCGGCGCGCCGCGTGCTGGACGACGAGTG
CGCGCCCACTCACTCGTTGTGGcgccgcgcgccgccgccgccgccgcagc
cgcgcgctccgtacccgccgTTTCGGCGCTGA
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